RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 NISCHQ9Y2I1 1504 aa50.53■■■■■ 5.68
FXN-202ENST00000396364 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
FXN-202ENST00000396364 ABCC9O60706 1549 aa43.16■■■■■ 4.5
FXN-202ENST00000396364 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
FXN-202ENST00000396364 DCAF8L2P0C7V8 631 aa42.02■■■■■ 4.32
FXN-202ENST00000396364 NACADO15069 1562 aa41.96■■■■■ 4.31
FXN-202ENST00000396364 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
FXN-202ENST00000396364 MYO15BQ96JP2 1530 aa41.89■■■■■ 4.3
FXN-202ENST00000396364 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.3
FXN-202ENST00000396364 UNC13AQ9UPW8 1703 aa40.85■■■■■ 4.13
FXN-202ENST00000396364 SCRIBQ14160 1630 aa40.82■■■■■ 4.12
FXN-202ENST00000396364 BICRAQ9NZM4 1560 aa40.44■■■■■ 4.06
FXN-202ENST00000396364 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.05
FXN-202ENST00000396364 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.04
FXN-202ENST00000396364 EIF4G1Q04637 1599 aaKnown RBP39.41■■■■□ 3.9
FXN-202ENST00000396364 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
FXN-202ENST00000396364 CECR2Q9BXF3 1484 aa39.2■■■■□ 3.87
FXN-202ENST00000396364 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
FXN-202ENST00000396364 CC2D2AQ9P2K1 1620 aa39.1■■■■□ 3.85
FXN-202ENST00000396364 DNAJC5BQ9UF47 199 aa38.94■■■■□ 3.82
FXN-202ENST00000396364 MROH2BQ7Z745 1585 aa38.9■■■■□ 3.82
FXN-202ENST00000396364 SMARCA2P51531 1590 aa38.81■■■■□ 3.8
FXN-202ENST00000396364 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
FXN-202ENST00000396364 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
FXN-202ENST00000396364 RSF1Q96T23 1441 aaPredicted RBP38.66■■■■□ 3.78
FXN-202ENST00000396364 NCAPD3P42695 1498 aa38.64■■■■□ 3.78
FXN-202ENST00000396364 HMGXB3Q12766 1538 aa38.55■■■■□ 3.76
FXN-202ENST00000396364 WIZO95785 1651 aa38.54■■■■□ 3.76
FXN-202ENST00000396364 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
FXN-202ENST00000396364 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
FXN-202ENST00000396364 SUPT5HO00267 1087 aaKnown RBP38.14■■■■□ 3.7
FXN-202ENST00000396364 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
FXN-202ENST00000396364 LAMC3Q9Y6N6 1575 aa37.61■■■■□ 3.61
FXN-202ENST00000396364 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
FXN-202ENST00000396364 NESP48681 1621 aa37.46■■■■□ 3.59
FXN-202ENST00000396364 CFTRP13569 1480 aa37.44■■■■□ 3.58
FXN-202ENST00000396364 PDS5BQ9NTI5 1447 aa37.35■■■■□ 3.57
FXN-202ENST00000396364 PRDM2Q13029 1718 aa37.32■■■■□ 3.56
FXN-202ENST00000396364 ERCC6Q03468 1493 aa37.27■■■■□ 3.56
FXN-202ENST00000396364 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.54
FXN-202ENST00000396364 KIF21AQ7Z4S6 1674 aa37.12■■■■□ 3.53
FXN-202ENST00000396364 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.53
FXN-202ENST00000396364 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.5
FXN-202ENST00000396364 THOC2Q8NI27 1593 aaKnown RBP36.84■■■■□ 3.49
FXN-202ENST00000396364 ABCC8Q09428 1581 aa36.74■■■■□ 3.47
FXN-202ENST00000396364 WDR62O43379 1518 aa36.72■■■■□ 3.47
FXN-202ENST00000396364 URB2Q14146 1524 aaKnown RBP36.66■■■■□ 3.46
FXN-202ENST00000396364 CUX2O14529 1486 aa36.66■■■■□ 3.46
FXN-202ENST00000396364 DNMBPQ6XZF7 1577 aa36.64■■■■□ 3.46
FXN-202ENST00000396364 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
FXN-202ENST00000396364 WRNQ14191 1432 aaPredicted RBP eCLIP36.52■■■■□ 3.44
FXN-202ENST00000396364 CUX1P39880 1505 aa36.48■■■■□ 3.43
FXN-202ENST00000396364 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
FXN-202ENST00000396364 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
FXN-202ENST00000396364 SYNJ1O43426 1573 aa36.33■■■■□ 3.41
FXN-202ENST00000396364 FGD5Q6ZNL6 1462 aa36.31■■■■□ 3.4
FXN-202ENST00000396364 POLA1P09884 1462 aaPredicted RBP36.3■■■■□ 3.4
FXN-202ENST00000396364 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
FXN-202ENST00000396364 SOGA1O94964 1423 aa36.19■■■■□ 3.38
FXN-202ENST00000396364 TARBP1Q13395 1621 aaKnown RBP36.12■■■■□ 3.37
FXN-202ENST00000396364 RAD54L2Q9Y4B4 1467 aa36.09■■■■□ 3.37
FXN-202ENST00000396364 TRIM41Q8WV44 630 aa36.08■■■■□ 3.37
FXN-202ENST00000396364 WDR97A6NE52 1622 aa36.02■■■■□ 3.36
FXN-202ENST00000396364 ABCA10Q8WWZ4 1543 aa36■■■■□ 3.35
FXN-202ENST00000396364 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
FXN-202ENST00000396364 EIF4G3O43432 1585 aaKnown RBP35.91■■■■□ 3.34
FXN-202ENST00000396364 CHIC1Q5VXU3 224 aa35.88■■■■□ 3.33
FXN-202ENST00000396364 TDRD9Q8NDG6 1382 aaKnown RBP35.87■■■■□ 3.33
FXN-202ENST00000396364 AQRO60306 1485 aaKnown RBP eCLIP35.83■■■■□ 3.33
FXN-202ENST00000396364 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
FXN-202ENST00000396364 ABCA5Q8WWZ7 1642 aa35.79■■■■□ 3.32
FXN-202ENST00000396364 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
FXN-202ENST00000396364 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
FXN-202ENST00000396364 PBRM1Q86U86 1689 aa35.72■■■■□ 3.31
FXN-202ENST00000396364 ERICH3Q5RHP9 1530 aa35.62■■■■□ 3.29
FXN-202ENST00000396364 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
FXN-202ENST00000396364 SNAPC4Q5SXM2 1469 aa35.56■■■■□ 3.28
FXN-202ENST00000396364 EEA1Q15075 1411 aa35.49■■■■□ 3.27
FXN-202ENST00000396364 CUL7Q14999 1698 aa35.46■■■■□ 3.27
FXN-202ENST00000396364 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
FXN-202ENST00000396364 IGF1RP08069 1367 aa35.43■■■■□ 3.26
FXN-202ENST00000396364 ADAMTS12P58397 1594 aa35.42■■■■□ 3.26
FXN-202ENST00000396364 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
FXN-202ENST00000396364 FHAD1B1AJZ9 1412 aa35.41■■■■□ 3.26
FXN-202ENST00000396364 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
FXN-202ENST00000396364 FBLN2P98095 1184 aa35.38■■■■□ 3.25
FXN-202ENST00000396364 CHD1O14646 1710 aa35.36■■■■□ 3.25
FXN-202ENST00000396364 CARMIL1Q5VZK9 1371 aa35.29■■■■□ 3.24
FXN-202ENST00000396364 CSRNP3Q8WYN3 585 aa35.27■■■■□ 3.24
FXN-202ENST00000396364 GRIN2AQ12879 1464 aa35.25■■■■□ 3.23
FXN-202ENST00000396364 OSCARQ8IYS5 282 aa35.23■■■■□ 3.23
FXN-202ENST00000396364 FAM9AQ8IZU1 332 aaPredicted RBP35.22■■■■□ 3.23
FXN-202ENST00000396364 RAPGEF2Q9Y4G8 1499 aa35.17■■■■□ 3.22
FXN-202ENST00000396364 PRXQ9BXM0 1461 aa35.12■■■■□ 3.21
FXN-202ENST00000396364 NUP160Q12769 1436 aa35.04■■■■□ 3.2
FXN-202ENST00000396364 KIF21BO75037 1637 aa35.03■■■■□ 3.2
FXN-202ENST00000396364 CEP170Q5SW79 1584 aa35■■■■□ 3.19
FXN-202ENST00000396364 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
FXN-202ENST00000396364 KIAA0586Q9BVV6 1533 aa34.89■■■■□ 3.18
FXN-202ENST00000396364 GOLGA3Q08378 1498 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms