RNA–Protein interactions for RNA: ENST00000510741.5

SPOCK3-215, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-215ENST00000510741 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
SPOCK3-215ENST00000510741 CCDC180Q9P1Z9 1646 aa36.35■■■■□ 3.41
SPOCK3-215ENST00000510741 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
SPOCK3-215ENST00000510741 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
SPOCK3-215ENST00000510741 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
SPOCK3-215ENST00000510741 DCAF8L2P0C7V8 631 aa34.56■■■■□ 3.12
SPOCK3-215ENST00000510741 SUPT5HO00267 1087 aaKnown RBP34.36■■■■□ 3.09
SPOCK3-215ENST00000510741 MYO15BQ96JP2 1530 aa34.11■■■■□ 3.05
SPOCK3-215ENST00000510741 NACADO15069 1562 aa33.61■■■□□ 2.97
SPOCK3-215ENST00000510741 ABCC9O60706 1549 aa33.59■■■□□ 2.97
SPOCK3-215ENST00000510741 SCRIBQ14160 1630 aa33.57■■■□□ 2.96
SPOCK3-215ENST00000510741 CHIC1Q5VXU3 224 aa33.41■■■□□ 2.94
SPOCK3-215ENST00000510741 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
SPOCK3-215ENST00000510741 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
SPOCK3-215ENST00000510741 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
SPOCK3-215ENST00000510741 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
SPOCK3-215ENST00000510741 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
SPOCK3-215ENST00000510741 WIZO95785 1651 aa32.44■■■□□ 2.78
SPOCK3-215ENST00000510741 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
SPOCK3-215ENST00000510741 TRIM41Q8WV44 630 aa32.26■■■□□ 2.75
SPOCK3-215ENST00000510741 SMARCA4P51532 1647 aa32.24■■■□□ 2.75
SPOCK3-215ENST00000510741 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
SPOCK3-215ENST00000510741 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
SPOCK3-215ENST00000510741 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.72
SPOCK3-215ENST00000510741 EIF4G1Q04637 1599 aaKnown RBP32■■■□□ 2.71
SPOCK3-215ENST00000510741 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
SPOCK3-215ENST00000510741 PCGF6Q9BYE7 350 aa31.84■■■□□ 2.69
SPOCK3-215ENST00000510741 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
SPOCK3-215ENST00000510741 HRCP23327 699 aa31.79■■■□□ 2.68
SPOCK3-215ENST00000510741 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
SPOCK3-215ENST00000510741 PABPN1Q86U42 306 aaKnown RBP eCLIP31.73■■■□□ 2.67
SPOCK3-215ENST00000510741 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
SPOCK3-215ENST00000510741 TRIM26Q12899 539 aaPredicted RBP31.62■■■□□ 2.65
SPOCK3-215ENST00000510741 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
SPOCK3-215ENST00000510741 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
SPOCK3-215ENST00000510741 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
SPOCK3-215ENST00000510741 EEA1Q15075 1411 aa31.33■■■□□ 2.61
SPOCK3-215ENST00000510741 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
SPOCK3-215ENST00000510741 WRNQ14191 1432 aaPredicted RBP eCLIP31.18■■■□□ 2.58
SPOCK3-215ENST00000510741 SOGA1O94964 1423 aa31.09■■■□□ 2.57
SPOCK3-215ENST00000510741 HMGXB3Q12766 1538 aa31.06■■■□□ 2.56
SPOCK3-215ENST00000510741 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
SPOCK3-215ENST00000510741 TNIKQ9UKE5 1360 aa31.01■■■□□ 2.56
SPOCK3-215ENST00000510741 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
SPOCK3-215ENST00000510741 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
SPOCK3-215ENST00000510741 ZEB1P37275 1124 aaPredicted RBP30.97■■■□□ 2.55
SPOCK3-215ENST00000510741 GOLGA3Q08378 1498 aa30.93■■■□□ 2.54
SPOCK3-215ENST00000510741 CEP162Q5TB80 1403 aa30.91■■■□□ 2.54
SPOCK3-215ENST00000510741 RUSC2Q8N2Y8 1516 aa30.89■■■□□ 2.54
SPOCK3-215ENST00000510741 KIF21BO75037 1637 aa30.84■■■□□ 2.53
SPOCK3-215ENST00000510741 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
SPOCK3-215ENST00000510741 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
SPOCK3-215ENST00000510741 PPARGC1BQ86YN6 1023 aaKnown RBP30.8■■■□□ 2.52
SPOCK3-215ENST00000510741 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
SPOCK3-215ENST00000510741 UBTFP17480 764 aaKnown RBP30.74■■■□□ 2.51
SPOCK3-215ENST00000510741 CFTRP13569 1480 aa30.59■■■□□ 2.49
SPOCK3-215ENST00000510741 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
SPOCK3-215ENST00000510741 CUX1P39880 1505 aa30.45■■■□□ 2.47
SPOCK3-215ENST00000510741 CLIP1P30622 1438 aa30.45■■■□□ 2.47
SPOCK3-215ENST00000510741 ERICH3Q5RHP9 1530 aa30.45■■■□□ 2.46
SPOCK3-215ENST00000510741 RAPGEF2Q9Y4G8 1499 aa30.43■■■□□ 2.46
SPOCK3-215ENST00000510741 VPS8Q8N3P4 1428 aa30.34■■■□□ 2.45
SPOCK3-215ENST00000510741 PRXQ9BXM0 1461 aa30.33■■■□□ 2.45
SPOCK3-215ENST00000510741 KIF27Q86VH2 1401 aa30.32■■■□□ 2.45
SPOCK3-215ENST00000510741 CADPSQ9ULU8 1353 aa30.28■■■□□ 2.44
SPOCK3-215ENST00000510741 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
SPOCK3-215ENST00000510741 CCER1Q8TC90 406 aaPredicted RBP30.21■■■□□ 2.43
SPOCK3-215ENST00000510741 APLP2Q06481 763 aa30.15■■■□□ 2.42
SPOCK3-215ENST00000510741 TTBK1Q5TCY1 1321 aaPredicted RBP30.15■■■□□ 2.42
SPOCK3-215ENST00000510741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.14■■■□□ 2.41
SPOCK3-215ENST00000510741 CUX2O14529 1486 aa29.99■■■□□ 2.39
SPOCK3-215ENST00000510741 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
SPOCK3-215ENST00000510741 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
SPOCK3-215ENST00000510741 FANCD2Q9BXW9 1451 aa29.97■■■□□ 2.39
SPOCK3-215ENST00000510741 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
SPOCK3-215ENST00000510741 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
SPOCK3-215ENST00000510741 IGF1RP08069 1367 aa29.9■■■□□ 2.38
SPOCK3-215ENST00000510741 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
SPOCK3-215ENST00000510741 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
SPOCK3-215ENST00000510741 ARHGAP35Q9NRY4 1499 aa29.79■■■□□ 2.36
SPOCK3-215ENST00000510741 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
SPOCK3-215ENST00000510741 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
SPOCK3-215ENST00000510741 HNRNPUL2Q1KMD3 747 aaKnown RBP29.71■■■□□ 2.35
SPOCK3-215ENST00000510741 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
SPOCK3-215ENST00000510741 NESP48681 1621 aa29.65■■■□□ 2.34
SPOCK3-215ENST00000510741 MAP3K1Q13233 1512 aa29.65■■■□□ 2.34
SPOCK3-215ENST00000510741 CUL7Q14999 1698 aa29.64■■■□□ 2.34
SPOCK3-215ENST00000510741 RRBP1Q9P2E9 1410 aaKnown RBP29.59■■■□□ 2.33
SPOCK3-215ENST00000510741 RAD54L2Q9Y4B4 1467 aa29.58■■■□□ 2.33
SPOCK3-215ENST00000510741 KANK4Q5T7N3 995 aaPredicted RBP29.55■■■□□ 2.32
SPOCK3-215ENST00000510741 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
SPOCK3-215ENST00000510741 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SPOCK3-215ENST00000510741 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
SPOCK3-215ENST00000510741 TIAM1Q13009 1591 aa29.51■■■□□ 2.31
SPOCK3-215ENST00000510741 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.31
SPOCK3-215ENST00000510741 EFCAB5A4FU69 1503 aa29.5■■■□□ 2.31
SPOCK3-215ENST00000510741 CLSPNQ9HAW4 1339 aa29.48■■■□□ 2.31
SPOCK3-215ENST00000510741 CTTNBP2Q8WZ74 1663 aa29.46■■■□□ 2.31
SPOCK3-215ENST00000510741 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
SPOCK3-215ENST00000510741 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms