RNA–Protein interactions for RNA: ENST00000597017.5

KDELR1-203, Transcript of KDEL endoplasmic reticulum protein retention receptor 1, humanhuman

TSL 2 BASIC

Gene KDELR1, Length 1,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR1-203ENST00000597017 NISCHQ9Y2I1 1504 aa52.87■■■■■ 6.05
KDELR1-203ENST00000597017 CCDC180Q9P1Z9 1646 aa46.95■■■■■ 5.11
KDELR1-203ENST00000597017 ABCC9O60706 1549 aa45.77■■■■■ 4.92
KDELR1-203ENST00000597017 ZCCHC6Q5VYS8 1495 aaKnown RBP44.11■■■■■ 4.65
KDELR1-203ENST00000597017 RB1CC1Q8TDY2 1594 aa44.07■■■■■ 4.65
KDELR1-203ENST00000597017 DCAF8L2P0C7V8 631 aa44.05■■■■■ 4.64
KDELR1-203ENST00000597017 NACADO15069 1562 aa44.04■■■■■ 4.64
KDELR1-203ENST00000597017 MYO15BQ96JP2 1530 aa43.8■■■■■ 4.6
KDELR1-203ENST00000597017 DCAF1Q9Y4B6 1507 aa43.71■■■■■ 4.59
KDELR1-203ENST00000597017 UNC13AQ9UPW8 1703 aa43.19■■■■■ 4.51
KDELR1-203ENST00000597017 SCRIBQ14160 1630 aa42.91■■■■■ 4.46
KDELR1-203ENST00000597017 BICRAQ9NZM4 1560 aa42.79■■■■■ 4.44
KDELR1-203ENST00000597017 PABPN1Q86U42 306 aaKnown RBP eCLIP42.78■■■■■ 4.44
KDELR1-203ENST00000597017 SHROOM4Q9ULL8 1493 aa42.24■■■■■ 4.35
KDELR1-203ENST00000597017 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
KDELR1-203ENST00000597017 EIF4G1Q04637 1599 aaKnown RBP41.62■■■■■ 4.25
KDELR1-203ENST00000597017 CC2D2AQ9P2K1 1620 aa41.42■■■■■ 4.22
KDELR1-203ENST00000597017 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
KDELR1-203ENST00000597017 SMARCA4P51532 1647 aa41.03■■■■■ 4.16
KDELR1-203ENST00000597017 BAZ1AQ9NRL2 1556 aaPredicted RBP40.95■■■■■ 4.15
KDELR1-203ENST00000597017 MROH2BQ7Z745 1585 aa40.79■■■■■ 4.12
KDELR1-203ENST00000597017 ATAD2BQ9ULI0 1458 aa40.71■■■■■ 4.11
KDELR1-203ENST00000597017 SMARCA2P51531 1590 aa40.66■■■■■ 4.1
KDELR1-203ENST00000597017 NCAPD3P42695 1498 aa40.61■■■■■ 4.09
KDELR1-203ENST00000597017 PEG3Q9GZU2 1588 aa40.58■■■■■ 4.09
KDELR1-203ENST00000597017 HMGXB3Q12766 1538 aa40.48■■■■■ 4.07
KDELR1-203ENST00000597017 WIZO95785 1651 aa40.4■■■■■ 4.06
KDELR1-203ENST00000597017 BAZ1BQ9UIG0 1483 aaKnown RBP40.39■■■■■ 4.06
KDELR1-203ENST00000597017 RSF1Q96T23 1441 aaPredicted RBP40.34■■■■■ 4.05
KDELR1-203ENST00000597017 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
KDELR1-203ENST00000597017 NESP48681 1621 aa39.69■■■■□ 3.94
KDELR1-203ENST00000597017 LAMC3Q9Y6N6 1575 aa39.55■■■■□ 3.92
KDELR1-203ENST00000597017 SUPT5HO00267 1087 aaKnown RBP39.46■■■■□ 3.91
KDELR1-203ENST00000597017 CCDC88BA6NC98 1476 aa39.45■■■■□ 3.91
KDELR1-203ENST00000597017 CADPSQ9ULU8 1353 aa39.44■■■■□ 3.9
KDELR1-203ENST00000597017 ERCC6Q03468 1493 aa39.4■■■■□ 3.9
KDELR1-203ENST00000597017 CFTRP13569 1480 aa39.27■■■■□ 3.88
KDELR1-203ENST00000597017 KIF21AQ7Z4S6 1674 aa39.26■■■■□ 3.88
KDELR1-203ENST00000597017 PDS5BQ9NTI5 1447 aa39.23■■■■□ 3.87
KDELR1-203ENST00000597017 PRDM2Q13029 1718 aa39.09■■■■□ 3.85
KDELR1-203ENST00000597017 THOC2Q8NI27 1593 aaKnown RBP39.06■■■■□ 3.84
KDELR1-203ENST00000597017 FANCD2Q9BXW9 1451 aa39.04■■■■□ 3.84
KDELR1-203ENST00000597017 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
KDELR1-203ENST00000597017 CUX2O14529 1486 aa38.89■■■■□ 3.82
KDELR1-203ENST00000597017 MRC2Q9UBG0 1479 aa38.88■■■■□ 3.81
KDELR1-203ENST00000597017 WDR62O43379 1518 aa38.76■■■■□ 3.8
KDELR1-203ENST00000597017 URB2Q14146 1524 aaKnown RBP38.67■■■■□ 3.78
KDELR1-203ENST00000597017 TOPBP1Q92547 1522 aa38.45■■■■□ 3.75
KDELR1-203ENST00000597017 DNMBPQ6XZF7 1577 aa38.43■■■■□ 3.74
KDELR1-203ENST00000597017 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
KDELR1-203ENST00000597017 CUX1P39880 1505 aa38.26■■■■□ 3.72
KDELR1-203ENST00000597017 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
KDELR1-203ENST00000597017 IFT140Q96RY7 1462 aa38.12■■■■□ 3.69
KDELR1-203ENST00000597017 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
KDELR1-203ENST00000597017 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
KDELR1-203ENST00000597017 WRNQ14191 1432 aaPredicted RBP eCLIP38.03■■■■□ 3.68
KDELR1-203ENST00000597017 SYNJ1O43426 1573 aa38.01■■■■□ 3.68
KDELR1-203ENST00000597017 ZNF608Q9ULD9 1512 aaPredicted RBP38■■■■□ 3.67
KDELR1-203ENST00000597017 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
KDELR1-203ENST00000597017 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
KDELR1-203ENST00000597017 TOP2BQ02880 1626 aa37.96■■■■□ 3.67
KDELR1-203ENST00000597017 SOGA1O94964 1423 aa37.94■■■■□ 3.66
KDELR1-203ENST00000597017 EIF4G3O43432 1585 aaKnown RBP37.88■■■■□ 3.66
KDELR1-203ENST00000597017 WDR97A6NE52 1622 aa37.82■■■■□ 3.64
KDELR1-203ENST00000597017 AQRO60306 1485 aaKnown RBP eCLIP37.78■■■■□ 3.642e-8■■■■□ 21.5
KDELR1-203ENST00000597017 TDRD9Q8NDG6 1382 aaKnown RBP37.73■■■■□ 3.63
KDELR1-203ENST00000597017 ABCA10Q8WWZ4 1543 aa37.69■■■■□ 3.62
KDELR1-203ENST00000597017 ABCA5Q8WWZ7 1642 aa37.58■■■■□ 3.61
KDELR1-203ENST00000597017 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
KDELR1-203ENST00000597017 GAPVD1Q14C86 1478 aa37.52■■■■□ 3.6
KDELR1-203ENST00000597017 GRIN2BQ13224 1484 aa37.49■■■■□ 3.59
KDELR1-203ENST00000597017 SNAPC4Q5SXM2 1469 aa37.46■■■■□ 3.59
KDELR1-203ENST00000597017 DNAJC5Q9H3Z4 198 aa37.43■■■■□ 3.58
KDELR1-203ENST00000597017 CHD1O14646 1710 aa37.4■■■■□ 3.58
KDELR1-203ENST00000597017 MAGI1Q96QZ7 1491 aaPredicted RBP37.36■■■■□ 3.57
KDELR1-203ENST00000597017 OSCARQ8IYS5 282 aa37.25■■■■□ 3.55
KDELR1-203ENST00000597017 FBLN2P98095 1184 aa37.25■■■■□ 3.55
KDELR1-203ENST00000597017 ERICH3Q5RHP9 1530 aa37.24■■■■□ 3.55
KDELR1-203ENST00000597017 SYNJ2O15056 1496 aa37.22■■■■□ 3.55
KDELR1-203ENST00000597017 ADAMTS12P58397 1594 aa37.22■■■■□ 3.55
KDELR1-203ENST00000597017 TRIM41Q8WV44 630 aa37.21■■■■□ 3.55
KDELR1-203ENST00000597017 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
KDELR1-203ENST00000597017 CHMP7Q8WUX9 453 aaPredicted RBP37.14■■■■□ 3.54
KDELR1-203ENST00000597017 FHAD1B1AJZ9 1412 aa37.08■■■■□ 3.53
KDELR1-203ENST00000597017 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
KDELR1-203ENST00000597017 IGF1RP08069 1367 aa37.02■■■■□ 3.52
KDELR1-203ENST00000597017 RUSC2Q8N2Y8 1516 aa37.02■■■■□ 3.52
KDELR1-203ENST00000597017 CUL7Q14999 1698 aa36.97■■■■□ 3.51
KDELR1-203ENST00000597017 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
KDELR1-203ENST00000597017 CHIC1Q5VXU3 224 aa36.92■■■■□ 3.5
KDELR1-203ENST00000597017 CEP170Q5SW79 1584 aa36.89■■■■□ 3.5
KDELR1-203ENST00000597017 NUP160Q12769 1436 aa36.84■■■■□ 3.49
KDELR1-203ENST00000597017 CARMIL1Q5VZK9 1371 aa36.8■■■■□ 3.48
KDELR1-203ENST00000597017 RIMBP3CA6NJZ7 1639 aa36.78■■■■□ 3.48
KDELR1-203ENST00000597017 RIMBP3BA6NNM3 1639 aa36.78■■■■□ 3.48
KDELR1-203ENST00000597017 RIMBP3Q9UFD9 1639 aa36.78■■■■□ 3.48
KDELR1-203ENST00000597017 ARHGEF11O15085 1522 aa36.76■■■■□ 3.47
KDELR1-203ENST00000597017 RAPGEF2Q9Y4G8 1499 aa36.63■■■■□ 3.45
KDELR1-203ENST00000597017 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
KDELR1-203ENST00000597017 EEA1Q15075 1411 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms