RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 NISCHQ9Y2I1 1504 aa40.75■■■■■ 4.11
NKX2-1-202ENST00000498187 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
NKX2-1-202ENST00000498187 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
NKX2-1-202ENST00000498187 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
NKX2-1-202ENST00000498187 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
NKX2-1-202ENST00000498187 DCAF1Q9Y4B6 1507 aa33.7■■■□□ 2.99
NKX2-1-202ENST00000498187 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
NKX2-1-202ENST00000498187 CHIC1Q5VXU3 224 aa33.16■■■□□ 2.9
NKX2-1-202ENST00000498187 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
NKX2-1-202ENST00000498187 ABCC9O60706 1549 aa32.89■■■□□ 2.86
NKX2-1-202ENST00000498187 HRCP23327 699 aa32.55■■■□□ 2.8
NKX2-1-202ENST00000498187 NACADO15069 1562 aa32.5■■■□□ 2.79
NKX2-1-202ENST00000498187 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
NKX2-1-202ENST00000498187 RSF1Q96T23 1441 aaPredicted RBP32.24■■■□□ 2.75
NKX2-1-202ENST00000498187 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
NKX2-1-202ENST00000498187 LOC105371045A0A1W2PR82 267 aa32.14■■■□□ 2.74
NKX2-1-202ENST00000498187 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
NKX2-1-202ENST00000498187 CECR2Q9BXF3 1484 aa31.75■■■□□ 2.67
NKX2-1-202ENST00000498187 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
NKX2-1-202ENST00000498187 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
NKX2-1-202ENST00000498187 PPARGC1BQ86YN6 1023 aaKnown RBP31.66■■■□□ 2.66
NKX2-1-202ENST00000498187 TRIM26Q12899 539 aaPredicted RBP31.57■■■□□ 2.64
NKX2-1-202ENST00000498187 WIZO95785 1651 aa31.53■■■□□ 2.64
NKX2-1-202ENST00000498187 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
NKX2-1-202ENST00000498187 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
NKX2-1-202ENST00000498187 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
NKX2-1-202ENST00000498187 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
NKX2-1-202ENST00000498187 ZEB1P37275 1124 aaPredicted RBP31.16■■■□□ 2.58
NKX2-1-202ENST00000498187 EHMT2Q96KQ7 1210 aa31.14■■■□□ 2.58
NKX2-1-202ENST00000498187 SMARCA4P51532 1647 aa31.1■■■□□ 2.57
NKX2-1-202ENST00000498187 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
NKX2-1-202ENST00000498187 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
NKX2-1-202ENST00000498187 BICRAQ9NZM4 1560 aa31.02■■■□□ 2.56
NKX2-1-202ENST00000498187 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
NKX2-1-202ENST00000498187 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
NKX2-1-202ENST00000498187 ABCC8Q09428 1581 aa30.82■■■□□ 2.52
NKX2-1-202ENST00000498187 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
NKX2-1-202ENST00000498187 SOGA1O94964 1423 aa30.52■■■□□ 2.48
NKX2-1-202ENST00000498187 CEP162Q5TB80 1403 aa30.43■■■□□ 2.46
NKX2-1-202ENST00000498187 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
NKX2-1-202ENST00000498187 EEA1Q15075 1411 aa30.42■■■□□ 2.46
NKX2-1-202ENST00000498187 ATAD2BQ9ULI0 1458 aa30.39■■■□□ 2.46
NKX2-1-202ENST00000498187 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
NKX2-1-202ENST00000498187 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
NKX2-1-202ENST00000498187 PELP1Q8IZL8 1130 aaKnown RBP30.35■■■□□ 2.45
NKX2-1-202ENST00000498187 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
NKX2-1-202ENST00000498187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.27■■■□□ 2.44
NKX2-1-202ENST00000498187 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.43
NKX2-1-202ENST00000498187 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
NKX2-1-202ENST00000498187 SCAF1Q9H7N4 1312 aaKnown RBP30.21■■■□□ 2.43
NKX2-1-202ENST00000498187 GOLGA3Q08378 1498 aa30.21■■■□□ 2.43
NKX2-1-202ENST00000498187 CCER1Q8TC90 406 aaPredicted RBP30.21■■■□□ 2.43
NKX2-1-202ENST00000498187 TTBK1Q5TCY1 1321 aaPredicted RBP30.17■■■□□ 2.42
NKX2-1-202ENST00000498187 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
NKX2-1-202ENST00000498187 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
NKX2-1-202ENST00000498187 KIF21BO75037 1637 aa30.03■■■□□ 2.4
NKX2-1-202ENST00000498187 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
NKX2-1-202ENST00000498187 NCAPD3P42695 1498 aa30■■■□□ 2.39
NKX2-1-202ENST00000498187 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
NKX2-1-202ENST00000498187 CLIP1P30622 1438 aa29.85■■■□□ 2.37
NKX2-1-202ENST00000498187 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
NKX2-1-202ENST00000498187 DIEXFQ68CQ4 756 aaKnown RBP29.79■■■□□ 2.36
NKX2-1-202ENST00000498187 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
NKX2-1-202ENST00000498187 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
NKX2-1-202ENST00000498187 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
NKX2-1-202ENST00000498187 NEUROD1Q13562 356 aa29.71■■■□□ 2.35
NKX2-1-202ENST00000498187 CENPBP07199 599 aaPredicted RBP29.7■■■□□ 2.34
NKX2-1-202ENST00000498187 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
NKX2-1-202ENST00000498187 CFTRP13569 1480 aa29.57■■■□□ 2.32
NKX2-1-202ENST00000498187 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
NKX2-1-202ENST00000498187 APLP2Q06481 763 aa29.56■■■□□ 2.32
NKX2-1-202ENST00000498187 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
NKX2-1-202ENST00000498187 ERICH3Q5RHP9 1530 aa29.54■■■□□ 2.32
NKX2-1-202ENST00000498187 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
NKX2-1-202ENST00000498187 CUX1P39880 1505 aa29.49■■■□□ 2.31
NKX2-1-202ENST00000498187 GTF3C3Q9Y5Q9 886 aa29.48■■■□□ 2.31
NKX2-1-202ENST00000498187 ZNF316A6NFI3 1004 aaPredicted RBP29.48■■■□□ 2.31
NKX2-1-202ENST00000498187 PRDM2Q13029 1718 aa29.46■■■□□ 2.31
NKX2-1-202ENST00000498187 ARAP1Q96P48 1450 aa29.38■■■□□ 2.29
NKX2-1-202ENST00000498187 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
NKX2-1-202ENST00000498187 DNAJC5BQ9UF47 199 aa29.35■■■□□ 2.29
NKX2-1-202ENST00000498187 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
NKX2-1-202ENST00000498187 KANK4Q5T7N3 995 aaPredicted RBP29.17■■■□□ 2.26
NKX2-1-202ENST00000498187 ARHGAP35Q9NRY4 1499 aa29.11■■■□□ 2.25
NKX2-1-202ENST00000498187 CUX2O14529 1486 aa29.06■■■□□ 2.24
NKX2-1-202ENST00000498187 RRBP1Q9P2E9 1410 aaKnown RBP29.06■■■□□ 2.24
NKX2-1-202ENST00000498187 DHX57Q6P158 1386 aaKnown RBP29.05■■■□□ 2.24
NKX2-1-202ENST00000498187 MIER1Q8N108 512 aa29.04■■■□□ 2.24
NKX2-1-202ENST00000498187 YTHDC1Q96MU7 727 aaKnown RBP29.03■■■□□ 2.24
NKX2-1-202ENST00000498187 CLSPNQ9HAW4 1339 aa29.03■■■□□ 2.24
NKX2-1-202ENST00000498187 IGF1RP08069 1367 aa29.01■■■□□ 2.23
NKX2-1-202ENST00000498187 MYT1Q01538 1121 aa29■■■□□ 2.23
NKX2-1-202ENST00000498187 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.23
NKX2-1-202ENST00000498187 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
NKX2-1-202ENST00000498187 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
NKX2-1-202ENST00000498187 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
NKX2-1-202ENST00000498187 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
NKX2-1-202ENST00000498187 TIAM1Q13009 1591 aa28.83■■■□□ 2.21
NKX2-1-202ENST00000498187 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
NKX2-1-202ENST00000498187 NESP48681 1621 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms