RNA–Protein interactions for RNA: ENST00000513459.5

PACRGL-227, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-227ENST00000513459 NISCHQ9Y2I1 1504 aa50.18■■■■■ 5.62
PACRGL-227ENST00000513459 CCDC180Q9P1Z9 1646 aa44.25■■■■■ 4.67
PACRGL-227ENST00000513459 ABCC9O60706 1549 aa42.78■■■■■ 4.44
PACRGL-227ENST00000513459 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
PACRGL-227ENST00000513459 DCAF8L2P0C7V8 631 aa41.85■■■■■ 4.29
PACRGL-227ENST00000513459 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
PACRGL-227ENST00000513459 NACADO15069 1562 aa41.52■■■■■ 4.24
PACRGL-227ENST00000513459 MYO15BQ96JP2 1530 aa41.47■■■■■ 4.23
PACRGL-227ENST00000513459 RB1CC1Q8TDY2 1594 aa41.41■■■■■ 4.22
PACRGL-227ENST00000513459 SCRIBQ14160 1630 aa40.49■■■■■ 4.07
PACRGL-227ENST00000513459 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
PACRGL-227ENST00000513459 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
PACRGL-227ENST00000513459 SHROOM4Q9ULL8 1493 aa40.14■■■■■ 4.02
PACRGL-227ENST00000513459 BICRAQ9NZM4 1560 aa40.06■■■■■ 4
PACRGL-227ENST00000513459 CECR2Q9BXF3 1484 aa39.02■■■■□ 3.84
PACRGL-227ENST00000513459 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
PACRGL-227ENST00000513459 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
PACRGL-227ENST00000513459 SMARCA4P51532 1647 aa38.77■■■■□ 3.8
PACRGL-227ENST00000513459 MROH2BQ7Z745 1585 aa38.68■■■■□ 3.78
PACRGL-227ENST00000513459 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
PACRGL-227ENST00000513459 DNAJC5BQ9UF47 199 aa38.65■■■■□ 3.78
PACRGL-227ENST00000513459 RSF1Q96T23 1441 aaPredicted RBP38.51■■■■□ 3.76
PACRGL-227ENST00000513459 ATAD2BQ9ULI0 1458 aa38.43■■■■□ 3.74
PACRGL-227ENST00000513459 SMARCA2P51531 1590 aa38.43■■■■□ 3.74
PACRGL-227ENST00000513459 PEG3Q9GZU2 1588 aa38.37■■■■□ 3.73
PACRGL-227ENST00000513459 NCAPD3P42695 1498 aa38.32■■■■□ 3.73
PACRGL-227ENST00000513459 WIZO95785 1651 aa38.27■■■■□ 3.72
PACRGL-227ENST00000513459 BAZ1BQ9UIG0 1483 aaKnown RBP38.19■■■■□ 3.7
PACRGL-227ENST00000513459 HMGXB3Q12766 1538 aa38.16■■■■□ 3.7
PACRGL-227ENST00000513459 SUPT5HO00267 1087 aaKnown RBP38.16■■■■□ 3.7
PACRGL-227ENST00000513459 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
PACRGL-227ENST00000513459 CCDC88BA6NC98 1476 aa37.51■■■■□ 3.6
PACRGL-227ENST00000513459 CADPSQ9ULU8 1353 aa37.28■■■■□ 3.56
PACRGL-227ENST00000513459 NESP48681 1621 aa37.18■■■■□ 3.54
PACRGL-227ENST00000513459 LAMC3Q9Y6N6 1575 aa37.18■■■■□ 3.54
PACRGL-227ENST00000513459 CFTRP13569 1480 aa37.16■■■■□ 3.54
PACRGL-227ENST00000513459 PDS5BQ9NTI5 1447 aa36.99■■■■□ 3.51
PACRGL-227ENST00000513459 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
PACRGL-227ENST00000513459 FANCD2Q9BXW9 1451 aa36.83■■■■□ 3.49
PACRGL-227ENST00000513459 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
PACRGL-227ENST00000513459 CEP164Q9UPV0 1460 aa36.73■■■■□ 3.47
PACRGL-227ENST00000513459 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
PACRGL-227ENST00000513459 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
PACRGL-227ENST00000513459 THOC2Q8NI27 1593 aaKnown RBP36.41■■■■□ 3.42
PACRGL-227ENST00000513459 URB2Q14146 1524 aaKnown RBP36.38■■■■□ 3.41
PACRGL-227ENST00000513459 ABCC8Q09428 1581 aa36.37■■■■□ 3.41
PACRGL-227ENST00000513459 WDR62O43379 1518 aa36.33■■■■□ 3.41
PACRGL-227ENST00000513459 WRNQ14191 1432 aaPredicted RBP eCLIP36.33■■■■□ 3.41
PACRGL-227ENST00000513459 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
PACRGL-227ENST00000513459 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
PACRGL-227ENST00000513459 CUX1P39880 1505 aa36.24■■■■□ 3.39
PACRGL-227ENST00000513459 CUX2O14529 1486 aa36.18■■■■□ 3.38
PACRGL-227ENST00000513459 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
PACRGL-227ENST00000513459 TOP2BQ02880 1626 aa36.11■■■■□ 3.37
PACRGL-227ENST00000513459 BIVM-ERCC5R4GMW8 1640 aa36.06■■■■□ 3.36
PACRGL-227ENST00000513459 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
PACRGL-227ENST00000513459 POLA1P09884 1462 aaPredicted RBP36.04■■■■□ 3.36
PACRGL-227ENST00000513459 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
PACRGL-227ENST00000513459 SOGA1O94964 1423 aa35.95■■■■□ 3.34
PACRGL-227ENST00000513459 CHIC1Q5VXU3 224 aa35.94■■■■□ 3.34
PACRGL-227ENST00000513459 IFT140Q96RY7 1462 aa35.93■■■■□ 3.34
PACRGL-227ENST00000513459 RAD54L2Q9Y4B4 1467 aa35.88■■■■□ 3.33
PACRGL-227ENST00000513459 TARBP1Q13395 1621 aaKnown RBP35.79■■■■□ 3.32
PACRGL-227ENST00000513459 ABCA10Q8WWZ4 1543 aa35.73■■■■□ 3.31
PACRGL-227ENST00000513459 ZNF608Q9ULD9 1512 aaPredicted RBP35.68■■■■□ 3.3
PACRGL-227ENST00000513459 TDRD9Q8NDG6 1382 aaKnown RBP35.67■■■■□ 3.3
PACRGL-227ENST00000513459 WDR97A6NE52 1622 aa35.61■■■■□ 3.29
PACRGL-227ENST00000513459 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
PACRGL-227ENST00000513459 KIF27Q86VH2 1401 aa35.54■■■■□ 3.28
PACRGL-227ENST00000513459 EIF4G3O43432 1585 aaKnown RBP35.53■■■■□ 3.28
PACRGL-227ENST00000513459 GAPVD1Q14C86 1478 aa35.53■■■■□ 3.28
PACRGL-227ENST00000513459 ABCA5Q8WWZ7 1642 aa35.47■■■■□ 3.27
PACRGL-227ENST00000513459 GRIN2BQ13224 1484 aa35.43■■■■□ 3.26
PACRGL-227ENST00000513459 RUSC2Q8N2Y8 1516 aa35.34■■■■□ 3.25
PACRGL-227ENST00000513459 ERICH3Q5RHP9 1530 aa35.31■■■■□ 3.24
PACRGL-227ENST00000513459 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
PACRGL-227ENST00000513459 EEA1Q15075 1411 aa35.3■■■■□ 3.24
PACRGL-227ENST00000513459 IGF1RP08069 1367 aa35.29■■■■□ 3.24
PACRGL-227ENST00000513459 SNAPC4Q5SXM2 1469 aa35.27■■■■□ 3.24
PACRGL-227ENST00000513459 MAGI1Q96QZ7 1491 aaPredicted RBP35.26■■■■□ 3.23
PACRGL-227ENST00000513459 FAM9AQ8IZU1 332 aaPredicted RBP35.25■■■■□ 3.23
PACRGL-227ENST00000513459 CSRNP3Q8WYN3 585 aa35.19■■■■□ 3.22
PACRGL-227ENST00000513459 FBLN2P98095 1184 aa35.15■■■■□ 3.22
PACRGL-227ENST00000513459 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
PACRGL-227ENST00000513459 CHMP7Q8WUX9 453 aaPredicted RBP35.15■■■■□ 3.22
PACRGL-227ENST00000513459 CARMIL1Q5VZK9 1371 aa35.12■■■■□ 3.21
PACRGL-227ENST00000513459 SYNJ2O15056 1496 aa35.11■■■■□ 3.21
PACRGL-227ENST00000513459 CUL7Q14999 1698 aa35.1■■■■□ 3.21
PACRGL-227ENST00000513459 ADAMTS12P58397 1594 aa35.09■■■■□ 3.21
PACRGL-227ENST00000513459 PRXQ9BXM0 1461 aa34.96■■■■□ 3.19
PACRGL-227ENST00000513459 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
PACRGL-227ENST00000513459 GRIN2AQ12879 1464 aa34.96■■■■□ 3.19
PACRGL-227ENST00000513459 CHD1O14646 1710 aa34.92■■■■□ 3.18
PACRGL-227ENST00000513459 OSCARQ8IYS5 282 aa34.9■■■■□ 3.18
PACRGL-227ENST00000513459 KIF21BO75037 1637 aa34.8■■■■□ 3.16
PACRGL-227ENST00000513459 NUP160Q12769 1436 aa34.76■■■■□ 3.15
PACRGL-227ENST00000513459 EHMT2Q96KQ7 1210 aa34.75■■■■□ 3.15
PACRGL-227ENST00000513459 GOLGA3Q08378 1498 aa34.71■■■■□ 3.15
PACRGL-227ENST00000513459 CEP170Q5SW79 1584 aa34.7■■■■□ 3.15
PACRGL-227ENST00000513459 UBTFP17480 764 aaKnown RBP34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms