RNA–Protein interactions for RNA: ENST00000324989.11

CRMP1-201, Transcript of collapsin response mediator protein 1, humanhuman

TSL 1 (best) BASIC

Gene CRMP1, Length 3,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRMP1-201ENST00000324989 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
CRMP1-201ENST00000324989 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
CRMP1-201ENST00000324989 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
CRMP1-201ENST00000324989 DCAF8L2P0C7V8 631 aa33.04■■■□□ 2.88
CRMP1-201ENST00000324989 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
CRMP1-201ENST00000324989 CHIC1Q5VXU3 224 aa32.69■■■□□ 2.82
CRMP1-201ENST00000324989 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
CRMP1-201ENST00000324989 PCGF6Q9BYE7 350 aa32.49■■■□□ 2.79
CRMP1-201ENST00000324989 HRCP23327 699 aa32.47■■■□□ 2.79
CRMP1-201ENST00000324989 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
CRMP1-201ENST00000324989 PPARGC1BQ86YN6 1023 aaKnown RBP32.12■■■□□ 2.73
CRMP1-201ENST00000324989 LOC105371045A0A1W2PR82 267 aa32.05■■■□□ 2.72
CRMP1-201ENST00000324989 DCAF1Q9Y4B6 1507 aa31.57■■■□□ 2.64
CRMP1-201ENST00000324989 TRIM26Q12899 539 aaPredicted RBP31.42■■■□□ 2.62
CRMP1-201ENST00000324989 EHMT2Q96KQ7 1210 aa31.38■■■□□ 2.61
CRMP1-201ENST00000324989 FAM9AQ8IZU1 332 aaPredicted RBP31.35■■■□□ 2.61
CRMP1-201ENST00000324989 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
CRMP1-201ENST00000324989 SCRIBQ14160 1630 aa31.07■■■□□ 2.57
CRMP1-201ENST00000324989 ABCC9O60706 1549 aa31.07■■■□□ 2.56
CRMP1-201ENST00000324989 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.56
CRMP1-201ENST00000324989 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
CRMP1-201ENST00000324989 ZEB1P37275 1124 aaPredicted RBP30.79■■■□□ 2.52
CRMP1-201ENST00000324989 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
CRMP1-201ENST00000324989 TTBK1Q5TCY1 1321 aaPredicted RBP30.43■■■□□ 2.46
CRMP1-201ENST00000324989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.4■■■□□ 2.46
CRMP1-201ENST00000324989 SCAF1Q9H7N4 1312 aaKnown RBP30.36■■■□□ 2.45
CRMP1-201ENST00000324989 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
CRMP1-201ENST00000324989 CCER1Q8TC90 406 aaPredicted RBP30.3■■■□□ 2.44
CRMP1-201ENST00000324989 WIZO95785 1651 aa30.23■■■□□ 2.43
CRMP1-201ENST00000324989 NACADO15069 1562 aa30.03■■■□□ 2.4
CRMP1-201ENST00000324989 PELP1Q8IZL8 1130 aaKnown RBP29.94■■■□□ 2.38
CRMP1-201ENST00000324989 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
CRMP1-201ENST00000324989 NEUROD1Q13562 356 aa29.87■■■□□ 2.37
CRMP1-201ENST00000324989 DIEXFQ68CQ4 756 aaKnown RBP29.86■■■□□ 2.37
CRMP1-201ENST00000324989 BAZ1AQ9NRL2 1556 aaPredicted RBP29.82■■■□□ 2.37
CRMP1-201ENST00000324989 ACIN1Q9UKV3 1341 aaKnown RBP29.82■■■□□ 2.36
CRMP1-201ENST00000324989 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
CRMP1-201ENST00000324989 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
CRMP1-201ENST00000324989 CEP162Q5TB80 1403 aa29.71■■■□□ 2.35
CRMP1-201ENST00000324989 SOGA1O94964 1423 aa29.7■■■□□ 2.35
CRMP1-201ENST00000324989 GTF3C3Q9Y5Q9 886 aa29.67■■■□□ 2.34
CRMP1-201ENST00000324989 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
CRMP1-201ENST00000324989 CENPBP07199 599 aaPredicted RBP29.62■■■□□ 2.33
CRMP1-201ENST00000324989 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
CRMP1-201ENST00000324989 YTHDC1Q96MU7 727 aaKnown RBP29.55■■■□□ 2.32
CRMP1-201ENST00000324989 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
CRMP1-201ENST00000324989 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
CRMP1-201ENST00000324989 HNRNPUL2Q1KMD3 747 aaKnown RBP29.5■■■□□ 2.31
CRMP1-201ENST00000324989 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
CRMP1-201ENST00000324989 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
CRMP1-201ENST00000324989 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
CRMP1-201ENST00000324989 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
CRMP1-201ENST00000324989 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
CRMP1-201ENST00000324989 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
CRMP1-201ENST00000324989 ZNF316A6NFI3 1004 aaPredicted RBP29.39■■■□□ 2.3
CRMP1-201ENST00000324989 GOLGA3Q08378 1498 aa29.25■■■□□ 2.27
CRMP1-201ENST00000324989 EEA1Q15075 1411 aa29.22■■■□□ 2.27
CRMP1-201ENST00000324989 APLP2Q06481 763 aa29.18■■■□□ 2.26
CRMP1-201ENST00000324989 MIER1Q8N108 512 aa29.18■■■□□ 2.26
CRMP1-201ENST00000324989 UNC13AQ9UPW8 1703 aa29.12■■■□□ 2.25
CRMP1-201ENST00000324989 CLIP1P30622 1438 aa29.08■■■□□ 2.25
CRMP1-201ENST00000324989 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
CRMP1-201ENST00000324989 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
CRMP1-201ENST00000324989 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.22
CRMP1-201ENST00000324989 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
CRMP1-201ENST00000324989 KIF21BO75037 1637 aa28.79■■■□□ 2.2
CRMP1-201ENST00000324989 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
CRMP1-201ENST00000324989 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.19
CRMP1-201ENST00000324989 ITGAEP38570 1179 aa28.69■■■□□ 2.18
CRMP1-201ENST00000324989 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
CRMP1-201ENST00000324989 KANK4Q5T7N3 995 aaPredicted RBP28.65■■■□□ 2.18
CRMP1-201ENST00000324989 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
CRMP1-201ENST00000324989 DHX57Q6P158 1386 aaKnown RBP28.55■■■□□ 2.16
CRMP1-201ENST00000324989 MYT1Q01538 1121 aa28.43■■■□□ 2.14
CRMP1-201ENST00000324989 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
CRMP1-201ENST00000324989 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
CRMP1-201ENST00000324989 CLSPNQ9HAW4 1339 aa28.35■■■□□ 2.13
CRMP1-201ENST00000324989 SUPT16HQ9Y5B9 1047 aaKnown RBP28.34■■■□□ 2.13
CRMP1-201ENST00000324989 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
CRMP1-201ENST00000324989 KCNH8Q96L42 1107 aa28.27■■■□□ 2.12
CRMP1-201ENST00000324989 CCNB3Q8WWL7 1395 aa28.25■■■□□ 2.11
CRMP1-201ENST00000324989 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
CRMP1-201ENST00000324989 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
CRMP1-201ENST00000324989 KIF27Q86VH2 1401 aa28.22■■■□□ 2.11
CRMP1-201ENST00000324989 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
CRMP1-201ENST00000324989 RRBP1Q9P2E9 1410 aaKnown RBP28.17■■■□□ 2.1
CRMP1-201ENST00000324989 CUX1P39880 1505 aa28.17■■■□□ 2.1
CRMP1-201ENST00000324989 BCANQ96GW7 911 aa28.16■■■□□ 2.1
CRMP1-201ENST00000324989 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.1
CRMP1-201ENST00000324989 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
CRMP1-201ENST00000324989 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
CRMP1-201ENST00000324989 ARHGAP35Q9NRY4 1499 aa28.12■■■□□ 2.09
CRMP1-201ENST00000324989 DDX10Q13206 875 aaKnown RBP28.09■■■□□ 2.09
CRMP1-201ENST00000324989 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
CRMP1-201ENST00000324989 SIN3AQ96ST3 1273 aa28.09■■■□□ 2.09
CRMP1-201ENST00000324989 TSHZ2Q9NRE2 1034 aa27.98■■■□□ 2.07
CRMP1-201ENST00000324989 CUX2O14529 1486 aa27.97■■■□□ 2.07
CRMP1-201ENST00000324989 FKBP8Q14318 412 aa27.91■■■□□ 2.06
CRMP1-201ENST00000324989 MAPKBP1O60336 1514 aa27.9■■■□□ 2.06
CRMP1-201ENST00000324989 SETD5Q9C0A6 1442 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms