Protein–RNA interactions for Protein: P29373

CRABP2, Cellular retinoic acid-binding protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP2P29373 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CRABP2P29373 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRABP2P29373 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.58■□□□□ 0.89
CRABP2P29373 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CRABP2P29373 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRABP2P29373 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRABP2P29373 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRABP2P29373 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CRABP2P29373 AL358852.1-201ENST00000623174 1268 ntBASIC20.58■□□□□ 0.89
CRABP2P29373 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CRABP2P29373 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRABP2P29373 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CRABP2P29373 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRABP2P29373 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 AC073314.1-201ENST00000568729 2216 ntBASIC20.57■□□□□ 0.88
CRABP2P29373 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.57■□□□□ 0.88
CRABP2P29373 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CRABP2P29373 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.57■□□□□ 0.88
CRABP2P29373 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.57■□□□□ 0.88
CRABP2P29373 AC061975.6-201ENST00000579045 1553 ntBASIC20.57■□□□□ 0.88
CRABP2P29373 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.57■□□□□ 0.88
CRABP2P29373 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.57■□□□□ 0.88
CRABP2P29373 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRABP2P29373 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
CRABP2P29373 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CRABP2P29373 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CRABP2P29373 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CRABP2P29373 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CRABP2P29373 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.56■□□□□ 0.88
CRABP2P29373 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.56■□□□□ 0.88
CRABP2P29373 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CRABP2P29373 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CRABP2P29373 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.56■□□□□ 0.88
CRABP2P29373 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.56■□□□□ 0.88
CRABP2P29373 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CRABP2P29373 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRABP2P29373 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
CRABP2P29373 AC011484.1-201ENST00000377652 1995 ntBASIC20.55■□□□□ 0.88
CRABP2P29373 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRABP2P29373 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRABP2P29373 POU5F1P4-201ENST00000413175 1085 ntBASIC20.55■□□□□ 0.88
CRABP2P29373 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRABP2P29373 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.55■□□□□ 0.88
CRABP2P29373 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.55■□□□□ 0.88
CRABP2P29373 AL139246.5-201ENST00000606645 996 ntBASIC20.55■□□□□ 0.88
CRABP2P29373 AC008175.2-201ENST00000612840 297 ntBASIC20.55■□□□□ 0.88
CRABP2P29373 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.55■□□□□ 0.88
CRABP2P29373 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRABP2P29373 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.55■□□□□ 0.88
CRABP2P29373 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRABP2P29373 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CRABP2P29373 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CRABP2P29373 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CRABP2P29373 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CRABP2P29373 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRABP2P29373 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.53■□□□□ 0.88
CRABP2P29373 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CRABP2P29373 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRABP2P29373 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
CRABP2P29373 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms