RNA–Protein interactions for RNA: ENST00000359943.7

FAM3C-201, Transcript of family with sequence similarity 3 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3C, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-201ENST00000359943 NISCHQ9Y2I1 1504 aa42.55■■■■■ 4.4
FAM3C-201ENST00000359943 SHROOM4Q9ULL8 1493 aa36.65■■■■□ 3.46
FAM3C-201ENST00000359943 CCDC180Q9P1Z9 1646 aa36■■■■□ 3.35
FAM3C-201ENST00000359943 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
FAM3C-201ENST00000359943 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
FAM3C-201ENST00000359943 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
FAM3C-201ENST00000359943 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
FAM3C-201ENST00000359943 CHIC1Q5VXU3 224 aa34.58■■■■□ 3.13
FAM3C-201ENST00000359943 MYO15BQ96JP2 1530 aa34.47■■■■□ 3.11
FAM3C-201ENST00000359943 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
FAM3C-201ENST00000359943 ABCC9O60706 1549 aa33.96■■■■□ 3.03
FAM3C-201ENST00000359943 LOC105371045A0A1W2PR82 267 aa33.77■■■■□ 3
FAM3C-201ENST00000359943 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
FAM3C-201ENST00000359943 PCGF6Q9BYE7 350 aa33.52■■■□□ 2.96
FAM3C-201ENST00000359943 CECR2Q9BXF3 1484 aa33.41■■■□□ 2.94
FAM3C-201ENST00000359943 NACADO15069 1562 aa33.4■■■□□ 2.94
FAM3C-201ENST00000359943 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
FAM3C-201ENST00000359943 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
FAM3C-201ENST00000359943 HRCP23327 699 aa33.21■■■□□ 2.91
FAM3C-201ENST00000359943 FAM9AQ8IZU1 332 aaPredicted RBP33.2■■■□□ 2.91
FAM3C-201ENST00000359943 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
FAM3C-201ENST00000359943 EHMT2Q96KQ7 1210 aa33.13■■■□□ 2.89
FAM3C-201ENST00000359943 WIZO95785 1651 aa33.01■■■□□ 2.88
FAM3C-201ENST00000359943 PPARGC1BQ86YN6 1023 aaKnown RBP32.87■■■□□ 2.85
FAM3C-201ENST00000359943 TRIM26Q12899 539 aaPredicted RBP32.68■■■□□ 2.82
FAM3C-201ENST00000359943 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
FAM3C-201ENST00000359943 PABPN1Q86U42 306 aaKnown RBP eCLIP32.61■■■□□ 2.81
FAM3C-201ENST00000359943 UNC13AQ9UPW8 1703 aa32.53■■■□□ 2.8
FAM3C-201ENST00000359943 SMARCA4P51532 1647 aa32.42■■■□□ 2.78
FAM3C-201ENST00000359943 CCDC88BA6NC98 1476 aa32.34■■■□□ 2.77
FAM3C-201ENST00000359943 ABCC8Q09428 1581 aa32.32■■■□□ 2.76
FAM3C-201ENST00000359943 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
FAM3C-201ENST00000359943 TOP2AP11388 1531 aaKnown RBP32.32■■■□□ 2.76
FAM3C-201ENST00000359943 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
FAM3C-201ENST00000359943 BICRAQ9NZM4 1560 aa32.17■■■□□ 2.74
FAM3C-201ENST00000359943 SOGA1O94964 1423 aa32.01■■■□□ 2.71
FAM3C-201ENST00000359943 TTBK1Q5TCY1 1321 aaPredicted RBP31.97■■■□□ 2.71
FAM3C-201ENST00000359943 RUSC2Q8N2Y8 1516 aa31.89■■■□□ 2.7
FAM3C-201ENST00000359943 UBTFP17480 764 aaKnown RBP31.74■■■□□ 2.67
FAM3C-201ENST00000359943 CSRNP3Q8WYN3 585 aa31.73■■■□□ 2.67
FAM3C-201ENST00000359943 ZEB1P37275 1124 aaPredicted RBP31.7■■■□□ 2.67
FAM3C-201ENST00000359943 CEP162Q5TB80 1403 aa31.68■■■□□ 2.66
FAM3C-201ENST00000359943 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
FAM3C-201ENST00000359943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.67■■■□□ 2.66
FAM3C-201ENST00000359943 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
FAM3C-201ENST00000359943 PEG3Q9GZU2 1588 aa31.66■■■□□ 2.66
FAM3C-201ENST00000359943 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
FAM3C-201ENST00000359943 TNIKQ9UKE5 1360 aa31.53■■■□□ 2.64
FAM3C-201ENST00000359943 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
FAM3C-201ENST00000359943 CCER1Q8TC90 406 aaPredicted RBP31.45■■■□□ 2.63
FAM3C-201ENST00000359943 EEA1Q15075 1411 aa31.45■■■□□ 2.62
FAM3C-201ENST00000359943 RANGAP1P46060 587 aaPredicted RBP31.43■■■□□ 2.62
FAM3C-201ENST00000359943 GOLGA3Q08378 1498 aa31.38■■■□□ 2.61
FAM3C-201ENST00000359943 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.59
FAM3C-201ENST00000359943 RAPGEF2Q9Y4G8 1499 aa31.17■■■□□ 2.58
FAM3C-201ENST00000359943 CLIP1P30622 1438 aa31.12■■■□□ 2.57
FAM3C-201ENST00000359943 KIF21BO75037 1637 aa31.07■■■□□ 2.56
FAM3C-201ENST00000359943 HNRNPUL2Q1KMD3 747 aaKnown RBP31.02■■■□□ 2.56
FAM3C-201ENST00000359943 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
FAM3C-201ENST00000359943 NCAPD3P42695 1498 aa31■■■□□ 2.55
FAM3C-201ENST00000359943 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
FAM3C-201ENST00000359943 VPS8Q8N3P4 1428 aa30.89■■■□□ 2.54
FAM3C-201ENST00000359943 CUX1P39880 1505 aa30.88■■■□□ 2.53
FAM3C-201ENST00000359943 APLP2Q06481 763 aa30.86■■■□□ 2.53
FAM3C-201ENST00000359943 BIVM-ERCC5R4GMW8 1640 aa30.85■■■□□ 2.53
FAM3C-201ENST00000359943 CFTRP13569 1480 aa30.76■■■□□ 2.52
FAM3C-201ENST00000359943 PRXQ9BXM0 1461 aa30.73■■■□□ 2.51
FAM3C-201ENST00000359943 DIEXFQ68CQ4 756 aaKnown RBP30.7■■■□□ 2.51
FAM3C-201ENST00000359943 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
FAM3C-201ENST00000359943 KANK4Q5T7N3 995 aaPredicted RBP30.64■■■□□ 2.5
FAM3C-201ENST00000359943 SCAF1Q9H7N4 1312 aaKnown RBP30.62■■■□□ 2.49
FAM3C-201ENST00000359943 ARAP1Q96P48 1450 aa30.61■■■□□ 2.49
FAM3C-201ENST00000359943 ERICH3Q5RHP9 1530 aa30.59■■■□□ 2.49
FAM3C-201ENST00000359943 CADPSQ9ULU8 1353 aa30.5■■■□□ 2.47
FAM3C-201ENST00000359943 PELP1Q8IZL8 1130 aaKnown RBP30.49■■■□□ 2.47
FAM3C-201ENST00000359943 CUX2O14529 1486 aa30.49■■■□□ 2.47
FAM3C-201ENST00000359943 ZNF316A6NFI3 1004 aaPredicted RBP30.44■■■□□ 2.46
FAM3C-201ENST00000359943 IGF1RP08069 1367 aa30.42■■■□□ 2.46
FAM3C-201ENST00000359943 CC2D2AQ9P2K1 1620 aa30.42■■■□□ 2.46
FAM3C-201ENST00000359943 NEUROD1Q13562 356 aa30.39■■■□□ 2.46
FAM3C-201ENST00000359943 ARHGAP35Q9NRY4 1499 aa30.39■■■□□ 2.46
FAM3C-201ENST00000359943 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
FAM3C-201ENST00000359943 ITGAEP38570 1179 aa30.35■■■□□ 2.45
FAM3C-201ENST00000359943 P3H3Q8IVL6 736 aa30.29■■■□□ 2.44
FAM3C-201ENST00000359943 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
FAM3C-201ENST00000359943 PRDM2Q13029 1718 aa30.28■■■□□ 2.44
FAM3C-201ENST00000359943 ACIN1Q9UKV3 1341 aaKnown RBP30.27■■■□□ 2.44
FAM3C-201ENST00000359943 NESP48681 1621 aa30.24■■■□□ 2.43
FAM3C-201ENST00000359943 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
FAM3C-201ENST00000359943 YTHDC1Q96MU7 727 aaKnown RBP30.2■■■□□ 2.42
FAM3C-201ENST00000359943 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.42
FAM3C-201ENST00000359943 ATP1B4Q9UN42 357 aaPredicted RBP30.18■■■□□ 2.42
FAM3C-201ENST00000359943 DHX57Q6P158 1386 aaKnown RBP30.16■■■□□ 2.42
FAM3C-201ENST00000359943 MIER1Q8N108 512 aa30.14■■■□□ 2.42
FAM3C-201ENST00000359943 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
FAM3C-201ENST00000359943 RRBP1Q9P2E9 1410 aaKnown RBP30.1■■■□□ 2.41
FAM3C-201ENST00000359943 CCNB3Q8WWL7 1395 aa30.1■■■□□ 2.41
FAM3C-201ENST00000359943 GTF3C3Q9Y5Q9 886 aa30.04■■■□□ 2.4
FAM3C-201ENST00000359943 CENPBP07199 599 aaPredicted RBP30.03■■■□□ 2.4
FAM3C-201ENST00000359943 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms