Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 AC027796.2-201ENST00000575326 344 ntBASIC8.67□□□□□ -1.02
MACF1Q9UPN3 AC130371.2-201ENST00000619443 611 ntBASIC8.67□□□□□ -1.02
MACF1Q9UPN3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 AC116407.4-201ENST00000623319 1061 ntBASIC8.67□□□□□ -1.02
MACF1Q9UPN3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MACF1Q9UPN3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 PRELID1P1-202ENST00000567272 903 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AC005332.1-201ENST00000577698 1310 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 YBX1P2-201ENST00000489612 999 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 AC117947.1-201ENST00000427448 529 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 CKBP1-201ENST00000565489 1086 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 KRT16P2-201ENST00000414673 1423 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 HTR7P1-201ENST00000538670 1336 ntBASIC8.66□□□□□ -1.02
MACF1Q9UPN3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
MACF1Q9UPN3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 AC053503.5-201ENST00000601508 636 ntBASIC8.65□□□□□ -1.02
MACF1Q9UPN3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 AC009078.2-202ENST00000463353 338 ntBASIC8.65□□□□□ -1.02
MACF1Q9UPN3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 AP006587.3-201ENST00000525742 1516 ntBASIC8.65□□□□□ -1.02
MACF1Q9UPN3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
MACF1Q9UPN3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 SLC25A1P4-201ENST00000567977 778 ntBASIC8.65□□□□□ -1.03
MACF1Q9UPN3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms