RNA–Protein interactions for RNA: ENST00000409259.1

AC013269.1-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC013269.1, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013269.1-201ENST00000409259 NISCHQ9Y2I1 1504 aa48.78■■■■■ 5.4
AC013269.1-201ENST00000409259 CCDC180Q9P1Z9 1646 aa43.25■■■■■ 4.51
AC013269.1-201ENST00000409259 ABCC9O60706 1549 aa42.14■■■■■ 4.34
AC013269.1-201ENST00000409259 ZCCHC6Q5VYS8 1495 aaKnown RBP40.67■■■■■ 4.1
AC013269.1-201ENST00000409259 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
AC013269.1-201ENST00000409259 NACADO15069 1562 aa40.65■■■■■ 4.1
AC013269.1-201ENST00000409259 RB1CC1Q8TDY2 1594 aa40.63■■■■■ 4.09
AC013269.1-201ENST00000409259 MYO15BQ96JP2 1530 aa40.51■■■■■ 4.08
AC013269.1-201ENST00000409259 DCAF1Q9Y4B6 1507 aa40.39■■■■■ 4.06
AC013269.1-201ENST00000409259 UNC13AQ9UPW8 1703 aa39.69■■■■□ 3.94
AC013269.1-201ENST00000409259 SCRIBQ14160 1630 aa39.45■■■■□ 3.91
AC013269.1-201ENST00000409259 PABPN1Q86U42 306 aaKnown RBP eCLIP39.44■■■■□ 3.9
AC013269.1-201ENST00000409259 BICRAQ9NZM4 1560 aa39.41■■■■□ 3.9
AC013269.1-201ENST00000409259 SHROOM4Q9ULL8 1493 aa39.02■■■■□ 3.84
AC013269.1-201ENST00000409259 DNAJC5BQ9UF47 199 aa38.57■■■■□ 3.76
AC013269.1-201ENST00000409259 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
AC013269.1-201ENST00000409259 CC2D2AQ9P2K1 1620 aa38.13■■■■□ 3.7
AC013269.1-201ENST00000409259 CECR2Q9BXF3 1484 aa37.98■■■■□ 3.67
AC013269.1-201ENST00000409259 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
AC013269.1-201ENST00000409259 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
AC013269.1-201ENST00000409259 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
AC013269.1-201ENST00000409259 ATAD2BQ9ULI0 1458 aa37.56■■■■□ 3.6
AC013269.1-201ENST00000409259 NCAPD3P42695 1498 aa37.54■■■■□ 3.6
AC013269.1-201ENST00000409259 SMARCA2P51531 1590 aa37.51■■■■□ 3.6
AC013269.1-201ENST00000409259 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.59
AC013269.1-201ENST00000409259 HMGXB3Q12766 1538 aa37.33■■■■□ 3.57
AC013269.1-201ENST00000409259 RSF1Q96T23 1441 aaPredicted RBP37.25■■■■□ 3.55
AC013269.1-201ENST00000409259 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
AC013269.1-201ENST00000409259 WIZO95785 1651 aa37.17■■■■□ 3.54
AC013269.1-201ENST00000409259 TOP2AP11388 1531 aaKnown RBP36.8■■■■□ 3.48
AC013269.1-201ENST00000409259 NESP48681 1621 aa36.53■■■■□ 3.44
AC013269.1-201ENST00000409259 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
AC013269.1-201ENST00000409259 CADPSQ9ULU8 1353 aa36.45■■■■□ 3.43
AC013269.1-201ENST00000409259 SUPT5HO00267 1087 aaKnown RBP36.42■■■■□ 3.42
AC013269.1-201ENST00000409259 CCDC88BA6NC98 1476 aa36.39■■■■□ 3.42
AC013269.1-201ENST00000409259 ERCC6Q03468 1493 aa36.29■■■■□ 3.4
AC013269.1-201ENST00000409259 CFTRP13569 1480 aa36.27■■■■□ 3.4
AC013269.1-201ENST00000409259 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
AC013269.1-201ENST00000409259 KIF21AQ7Z4S6 1674 aa36.07■■■■□ 3.37
AC013269.1-201ENST00000409259 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
AC013269.1-201ENST00000409259 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
AC013269.1-201ENST00000409259 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
AC013269.1-201ENST00000409259 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
AC013269.1-201ENST00000409259 CUX2O14529 1486 aa35.87■■■■□ 3.33
AC013269.1-201ENST00000409259 MRC2Q9UBG0 1479 aa35.83■■■■□ 3.33
AC013269.1-201ENST00000409259 WDR62O43379 1518 aa35.72■■■■□ 3.31
AC013269.1-201ENST00000409259 URB2Q14146 1524 aaKnown RBP35.63■■■■□ 3.29
AC013269.1-201ENST00000409259 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
AC013269.1-201ENST00000409259 TOPBP1Q92547 1522 aa35.44■■■■□ 3.26
AC013269.1-201ENST00000409259 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
AC013269.1-201ENST00000409259 CUX1P39880 1505 aa35.24■■■■□ 3.23
AC013269.1-201ENST00000409259 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
AC013269.1-201ENST00000409259 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
AC013269.1-201ENST00000409259 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
AC013269.1-201ENST00000409259 FGD5Q6ZNL6 1462 aa35.09■■■■□ 3.21
AC013269.1-201ENST00000409259 TARBP1Q13395 1621 aaKnown RBP35.05■■■■□ 3.2
AC013269.1-201ENST00000409259 SOGA1O94964 1423 aa35.03■■■■□ 3.2
AC013269.1-201ENST00000409259 ZNF608Q9ULD9 1512 aaPredicted RBP35■■■■□ 3.19
AC013269.1-201ENST00000409259 RAD54L2Q9Y4B4 1467 aa35■■■■□ 3.19
AC013269.1-201ENST00000409259 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
AC013269.1-201ENST00000409259 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
AC013269.1-201ENST00000409259 BIVM-ERCC5R4GMW8 1640 aa34.97■■■■□ 3.19
AC013269.1-201ENST00000409259 EIF4G3O43432 1585 aaKnown RBP34.84■■■■□ 3.17
AC013269.1-201ENST00000409259 AQRO60306 1485 aaKnown RBP eCLIP34.83■■■■□ 3.17
AC013269.1-201ENST00000409259 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
AC013269.1-201ENST00000409259 ABCA10Q8WWZ4 1543 aa34.78■■■■□ 3.16
AC013269.1-201ENST00000409259 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
AC013269.1-201ENST00000409259 GAPVD1Q14C86 1478 aa34.62■■■■□ 3.13
AC013269.1-201ENST00000409259 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
AC013269.1-201ENST00000409259 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
AC013269.1-201ENST00000409259 GRIN2BQ13224 1484 aa34.59■■■■□ 3.13
AC013269.1-201ENST00000409259 SNAPC4Q5SXM2 1469 aa34.49■■■■□ 3.11
AC013269.1-201ENST00000409259 PBRM1Q86U86 1689 aa34.48■■■■□ 3.11
AC013269.1-201ENST00000409259 MAGI1Q96QZ7 1491 aaPredicted RBP34.48■■■■□ 3.11
AC013269.1-201ENST00000409259 OSCARQ8IYS5 282 aa34.46■■■■□ 3.11
AC013269.1-201ENST00000409259 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
AC013269.1-201ENST00000409259 ERICH3Q5RHP9 1530 aa34.37■■■■□ 3.09
AC013269.1-201ENST00000409259 FBLN2P98095 1184 aa34.36■■■■□ 3.09
AC013269.1-201ENST00000409259 CHD1O14646 1710 aa34.35■■■■□ 3.09
AC013269.1-201ENST00000409259 KIF27Q86VH2 1401 aa34.35■■■■□ 3.09
AC013269.1-201ENST00000409259 SYNJ2O15056 1496 aa34.34■■■■□ 3.09
AC013269.1-201ENST00000409259 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.08
AC013269.1-201ENST00000409259 ADAMTS12P58397 1594 aa34.24■■■■□ 3.07
AC013269.1-201ENST00000409259 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
AC013269.1-201ENST00000409259 IGF1RP08069 1367 aa34.23■■■■□ 3.07
AC013269.1-201ENST00000409259 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
AC013269.1-201ENST00000409259 CHIC1Q5VXU3 224 aa34.14■■■■□ 3.06
AC013269.1-201ENST00000409259 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
AC013269.1-201ENST00000409259 CUL7Q14999 1698 aa34.06■■■■□ 3.04
AC013269.1-201ENST00000409259 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
AC013269.1-201ENST00000409259 CARMIL1Q5VZK9 1371 aa34.01■■■■□ 3.03
AC013269.1-201ENST00000409259 NUP160Q12769 1436 aa34.01■■■■□ 3.03
AC013269.1-201ENST00000409259 CEP170Q5SW79 1584 aa33.95■■■■□ 3.02
AC013269.1-201ENST00000409259 ARHGEF11O15085 1522 aa33.86■■■■□ 3.01
AC013269.1-201ENST00000409259 EEA1Q15075 1411 aa33.83■■■■□ 3.01
AC013269.1-201ENST00000409259 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3
AC013269.1-201ENST00000409259 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3
AC013269.1-201ENST00000409259 RIMBP3Q9UFD9 1639 aa33.82■■■■□ 3
AC013269.1-201ENST00000409259 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
AC013269.1-201ENST00000409259 CSRNP3Q8WYN3 585 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms