RNA–Protein interactions for RNA: ENST00000531916.5

CSRP1-214, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 5 BASIC

Gene CSRP1, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-214ENST00000531916 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
CSRP1-214ENST00000531916 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
CSRP1-214ENST00000531916 ABCC9O60706 1549 aa40.63■■■■■ 4.1
CSRP1-214ENST00000531916 RB1CC1Q8TDY2 1594 aa38.76■■■■□ 3.8
CSRP1-214ENST00000531916 NACADO15069 1562 aa38.57■■■■□ 3.77
CSRP1-214ENST00000531916 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
CSRP1-214ENST00000531916 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
CSRP1-214ENST00000531916 DNAJC5BQ9UF47 199 aa38.02■■■■□ 3.68
CSRP1-214ENST00000531916 UNC13AQ9UPW8 1703 aa37.86■■■■□ 3.65
CSRP1-214ENST00000531916 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
CSRP1-214ENST00000531916 PABPN1Q86U42 306 aaKnown RBP eCLIP37.84■■■■□ 3.65
CSRP1-214ENST00000531916 DCAF1Q9Y4B6 1507 aa37.73■■■■□ 3.63
CSRP1-214ENST00000531916 BICRAQ9NZM4 1560 aa37.69■■■■□ 3.62
CSRP1-214ENST00000531916 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
CSRP1-214ENST00000531916 SCRIBQ14160 1630 aa37.17■■■■□ 3.54
CSRP1-214ENST00000531916 CC2D2AQ9P2K1 1620 aa36.73■■■■□ 3.47
CSRP1-214ENST00000531916 EIF4G1Q04637 1599 aaKnown RBP36.71■■■■□ 3.47
CSRP1-214ENST00000531916 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
CSRP1-214ENST00000531916 NCAPD3P42695 1498 aa35.64■■■■□ 3.3
CSRP1-214ENST00000531916 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
CSRP1-214ENST00000531916 SMARCA4P51532 1647 aa35.52■■■■□ 3.28
CSRP1-214ENST00000531916 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
CSRP1-214ENST00000531916 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
CSRP1-214ENST00000531916 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
CSRP1-214ENST00000531916 PEG3Q9GZU2 1588 aa35.23■■■■□ 3.23
CSRP1-214ENST00000531916 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
CSRP1-214ENST00000531916 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
CSRP1-214ENST00000531916 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
CSRP1-214ENST00000531916 CUX2O14529 1486 aa34.99■■■■□ 3.19
CSRP1-214ENST00000531916 NESP48681 1621 aa34.97■■■■□ 3.19
CSRP1-214ENST00000531916 DNAJC5Q9H3Z4 198 aa34.77■■■■□ 3.16
CSRP1-214ENST00000531916 LAMC3Q9Y6N6 1575 aa34.77■■■■□ 3.16
CSRP1-214ENST00000531916 WIZO95785 1651 aa34.68■■■■□ 3.14
CSRP1-214ENST00000531916 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
CSRP1-214ENST00000531916 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
CSRP1-214ENST00000531916 CADPSQ9ULU8 1353 aa34.53■■■■□ 3.12
CSRP1-214ENST00000531916 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
CSRP1-214ENST00000531916 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
CSRP1-214ENST00000531916 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
CSRP1-214ENST00000531916 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
CSRP1-214ENST00000531916 CFTRP13569 1480 aa34.2■■■■□ 3.07
CSRP1-214ENST00000531916 WDR62O43379 1518 aa34.19■■■■□ 3.06
CSRP1-214ENST00000531916 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
CSRP1-214ENST00000531916 FANCD2Q9BXW9 1451 aa34.13■■■■□ 3.05
CSRP1-214ENST00000531916 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
CSRP1-214ENST00000531916 URB2Q14146 1524 aaKnown RBP33.86■■■■□ 3.01
CSRP1-214ENST00000531916 PRDM2Q13029 1718 aa33.78■■■■□ 3
CSRP1-214ENST00000531916 TOPBP1Q92547 1522 aa33.51■■■□□ 2.95
CSRP1-214ENST00000531916 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
CSRP1-214ENST00000531916 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
CSRP1-214ENST00000531916 ZNF608Q9ULD9 1512 aaPredicted RBP33.4■■■□□ 2.94
CSRP1-214ENST00000531916 DNMBPQ6XZF7 1577 aa33.39■■■□□ 2.94
CSRP1-214ENST00000531916 OSCARQ8IYS5 282 aa33.37■■■□□ 2.93
CSRP1-214ENST00000531916 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
CSRP1-214ENST00000531916 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
CSRP1-214ENST00000531916 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
CSRP1-214ENST00000531916 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
CSRP1-214ENST00000531916 AQRO60306 1485 aaKnown RBP eCLIP33.09■■■□□ 2.89
CSRP1-214ENST00000531916 RAD54L2Q9Y4B4 1467 aa33.03■■■□□ 2.88
CSRP1-214ENST00000531916 SOGA1O94964 1423 aa33.01■■■□□ 2.87
CSRP1-214ENST00000531916 CUX1P39880 1505 aa33■■■□□ 2.87
CSRP1-214ENST00000531916 FGD5Q6ZNL6 1462 aa32.98■■■□□ 2.87
CSRP1-214ENST00000531916 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
CSRP1-214ENST00000531916 RIMBP3CA6NJZ7 1639 aa32.93■■■□□ 2.86
CSRP1-214ENST00000531916 RIMBP3BA6NNM3 1639 aa32.93■■■□□ 2.86
CSRP1-214ENST00000531916 RIMBP3Q9UFD9 1639 aa32.93■■■□□ 2.86
CSRP1-214ENST00000531916 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
CSRP1-214ENST00000531916 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
CSRP1-214ENST00000531916 CHD1O14646 1710 aa32.88■■■□□ 2.85
CSRP1-214ENST00000531916 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
CSRP1-214ENST00000531916 SNAPC4Q5SXM2 1469 aa32.77■■■□□ 2.84
CSRP1-214ENST00000531916 FBLN2P98095 1184 aa32.75■■■□□ 2.83
CSRP1-214ENST00000531916 GRIN2BQ13224 1484 aa32.72■■■□□ 2.83
CSRP1-214ENST00000531916 MAGI1Q96QZ7 1491 aaPredicted RBP32.71■■■□□ 2.83
CSRP1-214ENST00000531916 ABCA10Q8WWZ4 1543 aa32.65■■■□□ 2.82
CSRP1-214ENST00000531916 GAPVD1Q14C86 1478 aa32.61■■■□□ 2.81
CSRP1-214ENST00000531916 CLASP1Q7Z460 1538 aa32.6■■■□□ 2.81
CSRP1-214ENST00000531916 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
CSRP1-214ENST00000531916 CHMP7Q8WUX9 453 aaPredicted RBP32.58■■■□□ 2.81
CSRP1-214ENST00000531916 ABCA5Q8WWZ7 1642 aa32.58■■■□□ 2.81
CSRP1-214ENST00000531916 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
CSRP1-214ENST00000531916 CYB5RLQ6IPT4 315 aa32.56■■■□□ 2.8
CSRP1-214ENST00000531916 PBRM1Q86U86 1689 aa32.55■■■□□ 2.8
CSRP1-214ENST00000531916 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
CSRP1-214ENST00000531916 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.8
CSRP1-214ENST00000531916 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
CSRP1-214ENST00000531916 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.79
CSRP1-214ENST00000531916 GRIN2AQ12879 1464 aa32.3■■■□□ 2.76
CSRP1-214ENST00000531916 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
CSRP1-214ENST00000531916 ERICH3Q5RHP9 1530 aa32.23■■■□□ 2.75
CSRP1-214ENST00000531916 FHAD1B1AJZ9 1412 aa32.22■■■□□ 2.75
CSRP1-214ENST00000531916 NUP160Q12769 1436 aa32.22■■■□□ 2.75
CSRP1-214ENST00000531916 CEP170Q5SW79 1584 aa32.18■■■□□ 2.74
CSRP1-214ENST00000531916 TRHP20396 242 aaPredicted RBP32.09■■■□□ 2.73
CSRP1-214ENST00000531916 ERCC6L2Q5T890 1561 aa32.08■■■□□ 2.73
CSRP1-214ENST00000531916 SHROOM2Q13796 1616 aa32.04■■■□□ 2.72
CSRP1-214ENST00000531916 IGF1RP08069 1367 aa31.87■■■□□ 2.69
CSRP1-214ENST00000531916 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
CSRP1-214ENST00000531916 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
CSRP1-214ENST00000531916 PRG4Q92954 1404 aaPredicted RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms