RNA–Protein interactions for RNA: ENST00000368787.3

LCE3D-201, Transcript of late cornified envelope 3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE3D, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3D-201ENST00000368787 NISCHQ9Y2I1 1504 aa46.05■■■■■ 4.96
LCE3D-201ENST00000368787 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
LCE3D-201ENST00000368787 ABCC9O60706 1549 aa40.95■■■■■ 4.15
LCE3D-201ENST00000368787 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
LCE3D-201ENST00000368787 NACADO15069 1562 aa38.97■■■■□ 3.83
LCE3D-201ENST00000368787 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
LCE3D-201ENST00000368787 MYO15BQ96JP2 1530 aa38.54■■■■□ 3.76
LCE3D-201ENST00000368787 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
LCE3D-201ENST00000368787 UNC13AQ9UPW8 1703 aa38.21■■■■□ 3.71
LCE3D-201ENST00000368787 PABPN1Q86U42 306 aaKnown RBP eCLIP38.12■■■■□ 3.69
LCE3D-201ENST00000368787 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
LCE3D-201ENST00000368787 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
LCE3D-201ENST00000368787 BICRAQ9NZM4 1560 aa37.92■■■■□ 3.66
LCE3D-201ENST00000368787 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
LCE3D-201ENST00000368787 SCRIBQ14160 1630 aa37.55■■■■□ 3.6
LCE3D-201ENST00000368787 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
LCE3D-201ENST00000368787 EIF4G1Q04637 1599 aaKnown RBP37.02■■■■□ 3.52
LCE3D-201ENST00000368787 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
LCE3D-201ENST00000368787 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
LCE3D-201ENST00000368787 SMARCA4P51532 1647 aa35.87■■■■□ 3.33
LCE3D-201ENST00000368787 ATAD2BQ9ULI0 1458 aa35.84■■■■□ 3.33
LCE3D-201ENST00000368787 SMARCA2P51531 1590 aa35.83■■■■□ 3.33
LCE3D-201ENST00000368787 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
LCE3D-201ENST00000368787 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
LCE3D-201ENST00000368787 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
LCE3D-201ENST00000368787 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
LCE3D-201ENST00000368787 MROH2BQ7Z745 1585 aa35.44■■■■□ 3.26
LCE3D-201ENST00000368787 ERCC6Q03468 1493 aa35.42■■■■□ 3.26
LCE3D-201ENST00000368787 CUX2O14529 1486 aa35.29■■■■□ 3.24
LCE3D-201ENST00000368787 NESP48681 1621 aa35.21■■■■□ 3.23
LCE3D-201ENST00000368787 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
LCE3D-201ENST00000368787 WIZO95785 1651 aa35.02■■■■□ 3.2
LCE3D-201ENST00000368787 PDS5BQ9NTI5 1447 aa34.93■■■■□ 3.18
LCE3D-201ENST00000368787 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
LCE3D-201ENST00000368787 THOC2Q8NI27 1593 aaKnown RBP34.86■■■■□ 3.17
LCE3D-201ENST00000368787 CADPSQ9ULU8 1353 aa34.86■■■■□ 3.17
LCE3D-201ENST00000368787 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
LCE3D-201ENST00000368787 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
LCE3D-201ENST00000368787 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
LCE3D-201ENST00000368787 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
LCE3D-201ENST00000368787 CFTRP13569 1480 aa34.51■■■■□ 3.11
LCE3D-201ENST00000368787 CEP164Q9UPV0 1460 aa34.5■■■■□ 3.11
LCE3D-201ENST00000368787 WDR62O43379 1518 aa34.47■■■■□ 3.11
LCE3D-201ENST00000368787 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
LCE3D-201ENST00000368787 PRDM2Q13029 1718 aa34.23■■■■□ 3.07
LCE3D-201ENST00000368787 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
LCE3D-201ENST00000368787 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
LCE3D-201ENST00000368787 ABCC8Q09428 1581 aa33.86■■■■□ 3.01
LCE3D-201ENST00000368787 TOPBP1Q92547 1522 aa33.82■■■■□ 3
LCE3D-201ENST00000368787 IFT140Q96RY7 1462 aa33.81■■■■□ 3
LCE3D-201ENST00000368787 DNMBPQ6XZF7 1577 aa33.75■■■□□ 2.99
LCE3D-201ENST00000368787 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
LCE3D-201ENST00000368787 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
LCE3D-201ENST00000368787 EIF4G3O43432 1585 aaKnown RBP33.52■■■□□ 2.96
LCE3D-201ENST00000368787 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
LCE3D-201ENST00000368787 TRIM41Q8WV44 630 aa33.48■■■□□ 2.95
LCE3D-201ENST00000368787 TARBP1Q13395 1621 aaKnown RBP33.48■■■□□ 2.95
LCE3D-201ENST00000368787 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
LCE3D-201ENST00000368787 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
LCE3D-201ENST00000368787 SOGA1O94964 1423 aa33.36■■■□□ 2.93
LCE3D-201ENST00000368787 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
LCE3D-201ENST00000368787 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
LCE3D-201ENST00000368787 CUX1P39880 1505 aa33.29■■■□□ 2.92
LCE3D-201ENST00000368787 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
LCE3D-201ENST00000368787 CHD1O14646 1710 aa33.22■■■□□ 2.91
LCE3D-201ENST00000368787 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
LCE3D-201ENST00000368787 RIMBP3CA6NJZ7 1639 aa33.18■■■□□ 2.9
LCE3D-201ENST00000368787 RIMBP3BA6NNM3 1639 aa33.18■■■□□ 2.9
LCE3D-201ENST00000368787 RIMBP3Q9UFD9 1639 aa33.18■■■□□ 2.9
LCE3D-201ENST00000368787 FBLN2P98095 1184 aa33.16■■■□□ 2.9
LCE3D-201ENST00000368787 ARHGEF11O15085 1522 aa33.12■■■□□ 2.89
LCE3D-201ENST00000368787 GRIN2BQ13224 1484 aa33.07■■■□□ 2.88
LCE3D-201ENST00000368787 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
LCE3D-201ENST00000368787 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
LCE3D-201ENST00000368787 CHMP7Q8WUX9 453 aaPredicted RBP32.98■■■□□ 2.87
LCE3D-201ENST00000368787 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
LCE3D-201ENST00000368787 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
LCE3D-201ENST00000368787 PBRM1Q86U86 1689 aa32.93■■■□□ 2.86
LCE3D-201ENST00000368787 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
LCE3D-201ENST00000368787 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
LCE3D-201ENST00000368787 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
LCE3D-201ENST00000368787 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
LCE3D-201ENST00000368787 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
LCE3D-201ENST00000368787 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
LCE3D-201ENST00000368787 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
LCE3D-201ENST00000368787 CLASP1Q7Z460 1538 aa32.84■■■□□ 2.85
LCE3D-201ENST00000368787 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
LCE3D-201ENST00000368787 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
LCE3D-201ENST00000368787 GRIN2AQ12879 1464 aa32.62■■■□□ 2.81
LCE3D-201ENST00000368787 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
LCE3D-201ENST00000368787 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
LCE3D-201ENST00000368787 NUP160Q12769 1436 aa32.5■■■□□ 2.79
LCE3D-201ENST00000368787 CEP170Q5SW79 1584 aa32.45■■■□□ 2.78
LCE3D-201ENST00000368787 TRHP20396 242 aaPredicted RBP32.44■■■□□ 2.78
LCE3D-201ENST00000368787 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
LCE3D-201ENST00000368787 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
LCE3D-201ENST00000368787 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
LCE3D-201ENST00000368787 CUL7Q14999 1698 aa32.18■■■□□ 2.74
LCE3D-201ENST00000368787 PRG4Q92954 1404 aaPredicted RBP32.17■■■□□ 2.74
LCE3D-201ENST00000368787 JPH4Q96JJ6 628 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 384.4 ms