Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.468e-8■■■■□ 26.3
U2AF2P26368 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.298e-8■■■■□ 26.3
U2AF2P26368 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.39■□□□□ 0.218e-8■■■■□ 26.3
U2AF2P26368 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.078e-8■■■■□ 26.3
U2AF2P26368 MSH5-211ENST00000463144 2296 ntTSL 511.81□□□□□ -0.528e-8■■■■□ 26.3
U2AF2P26368 NUP58-210ENST00000477876 560 ntTSL 56.14□□□□□ -1.433e-8■■■■□ 26.3
U2AF2P26368 EIF2B5-203ENST00000432982 597 ntTSL 521.39■■□□□ 1.014e-6■■■■□ 26.3
U2AF2P26368 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.984e-6■■■■□ 26.3
U2AF2P26368 EIF2B5-212ENST00000491144 3038 ntTSL 219.6■□□□□ 0.734e-6■■■■□ 26.3
U2AF2P26368 EIF2B5-209ENST00000481054 3460 ntTSL 1 (best)17.92■□□□□ 0.464e-6■■■■□ 26.3
U2AF2P26368 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.952e-7■■■■□ 26.3
U2AF2P26368 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.472e-7■■■■□ 26.3
U2AF2P26368 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.762e-7■■■■□ 26.3
U2AF2P26368 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.832e-7■■■■□ 26.3
U2AF2P26368 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.982e-7■■■■□ 26.2
U2AF2P26368 RNASET2-204ENST00000421787 1924 ntTSL 223.78■■□□□ 1.42e-7■■■■□ 26.2
U2AF2P26368 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.14■■□□□ 1.292e-7■■■■□ 26.2
U2AF2P26368 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.05■■□□□ 1.122e-7■■■■□ 26.2
U2AF2P26368 RNASET2-201ENST00000028008 1220 ntTSL 520.89■□□□□ 0.932e-7■■■■□ 26.2
U2AF2P26368 RNASET2-207ENST00000478180 963 ntTSL 520.35■□□□□ 0.852e-7■■■■□ 26.2
U2AF2P26368 RNASET2-202ENST00000358165 2445 ntTSL 219.27■□□□□ 0.682e-7■■■■□ 26.2
U2AF2P26368 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.672e-7■■■■□ 26.2
U2AF2P26368 RNASET2-209ENST00000499370 2164 ntTSL 212.98□□□□□ -0.332e-7■■■■□ 26.2
U2AF2P26368 RNASET2-208ENST00000496851 881 ntTSL 511.47□□□□□ -0.572e-7■■■■□ 26.2
U2AF2P26368 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.662e-7■■■■□ 26.2
U2AF2P26368 SLC25A16-205ENST00000493963 1121 ntTSL 1 (best)22.67■■□□□ 1.226e-7■■■■□ 26.2
U2AF2P26368 SLC25A16-204ENST00000491102 538 ntTSL 422.66■■□□□ 1.226e-7■■■■□ 26.2
U2AF2P26368 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.76e-7■■■■□ 26.2
U2AF2P26368 PRPF39-212ENST00000557477 724 ntTSL 53.89□□□□□ -1.792e-21■■■■□ 26.2
U2AF2P26368 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.723e-9■■■■□ 26.2
U2AF2P26368 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.593e-9■■■■□ 26.2
U2AF2P26368 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.933e-9■■■■□ 26.2
U2AF2P26368 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC9.19□□□□□ -0.943e-9■■■■□ 26.2
U2AF2P26368 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.163e-9■■■■□ 26.2
U2AF2P26368 VPS8-214ENST00000458721 946 ntTSL 56.11□□□□□ -1.439e-12■■■■□ 26.2
U2AF2P26368 VPS8-202ENST00000421069 552 ntTSL 52.92□□□□□ -1.949e-12■■■■□ 26.2
U2AF2P26368 GOLGA4-203ENST00000419177 760 ntTSL 318.77■□□□□ 0.67e-8■■■■□ 26.2
U2AF2P26368 GOLGA4-205ENST00000431105 568 ntTSL 316.51■□□□□ 0.237e-8■■■■□ 26.2
U2AF2P26368 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.172e-10■■■■□ 26.2
U2AF2P26368 AL355488.2-201ENST00000609909 2850 ntBASIC6.8□□□□□ -1.328e-8■■■■□ 26.2
U2AF2P26368 LAMTOR5-AS1-238ENST00000626572 1044 ntTSL 55.91□□□□□ -1.461e-7■■■■□ 26.2
U2AF2P26368 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.83■□□□□ 0.281e-6■■■■□ 26.2
U2AF2P26368 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.52■□□□□ 0.071e-6■■■■□ 26.2
U2AF2P26368 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.221e-6■■■■□ 26.2
U2AF2P26368 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC15.97■□□□□ 0.153e-6■■■■□ 26.2
U2AF2P26368 CPEB4-203ENST00000517880 1416 ntTSL 1 (best) BASIC12.46□□□□□ -0.413e-6■■■■□ 26.2
U2AF2P26368 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC9.8□□□□□ -0.843e-6■■■■□ 26.2
U2AF2P26368 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.863e-6■■■■□ 26.2
U2AF2P26368 CPEB4-206ENST00000519467 1348 ntTSL 58.56□□□□□ -1.043e-6■■■■□ 26.2
U2AF2P26368 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.65□□□□□ -1.183e-6■■■■□ 26.2
U2AF2P26368 EHMT1-205ENST00000462942 7842 ntTSL 211.4□□□□□ -0.587e-9■■■■□ 26.2
U2AF2P26368 PCNT-205ENST00000480896 10485 ntTSL 1 (best)12.34□□□□□ -0.432e-6■■■■□ 26.2
U2AF2P26368 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.472e-6■■■■□ 26.2
U2AF2P26368 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.072e-6■■■■□ 26.1
U2AF2P26368 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.671e-6■■■■□ 26.1
U2AF2P26368 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.061e-6■■■■□ 26.1
U2AF2P26368 SRRM2-224ENST00000575870 696 ntTSL 312.32□□□□□ -0.444e-18■■■■□ 26.1
U2AF2P26368 MAP1LC3B-206ENST00000564844 3085 ntTSL 1 (best)24.67■■□□□ 1.544e-11■■■■□ 26.1
U2AF2P26368 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.29■□□□□ 0.684e-11■■■■□ 26.1
U2AF2P26368 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.654e-11■■■■□ 26.1
U2AF2P26368 MAP1LC3B-208ENST00000570189 1259 ntTSL 1 (best)19.03■□□□□ 0.644e-11■■■■□ 26.1
U2AF2P26368 MAP1LC3B-205ENST00000564638 735 ntTSL 28.53□□□□□ -1.044e-11■■■■□ 26.1
U2AF2P26368 MORF4L2-204ENST00000422355 562 ntTSL 211.03□□□□□ -0.645e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.795e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.885e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.95e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.965e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.975e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-209ENST00000442614 869 ntTSL 28.71□□□□□ -1.025e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-215ENST00000498064 451 ntTSL 27.73□□□□□ -1.175e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-207ENST00000434230 899 ntTSL 27.39□□□□□ -1.235e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-214ENST00000492116 582 ntTSL 26.29□□□□□ -1.45e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-202ENST00000418819 849 ntTSL 35.77□□□□□ -1.495e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-211ENST00000467755 370 ntTSL 1 (best)5.5□□□□□ -1.535e-10■■■■□ 26.1
U2AF2P26368 MORF4L2-212ENST00000474653 573 ntTSL 22.65□□□□□ -1.995e-10■■■■□ 26.1
U2AF2P26368 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.87■□□□□ 0.134e-15■■■■□ 26.1
U2AF2P26368 RIF1-207ENST00000454583 3552 ntTSL 25.88□□□□□ -1.474e-10■■■■□ 26.1
U2AF2P26368 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.121e-9■■■■□ 26.1
U2AF2P26368 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC13.2□□□□□ -0.31e-9■■■■□ 26.1
U2AF2P26368 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.912e-6■■■■□ 26.1
U2AF2P26368 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.946e-8■■■■□ 26.1
U2AF2P26368 EXOSC7-207ENST00000481405 768 ntTSL 333.52■■■□□ 2.964e-6■■■■□ 26.1
U2AF2P26368 CLEC3B-203ENST00000490386 708 ntTSL 332.09■■■□□ 2.734e-6■■■■□ 26.1
U2AF2P26368 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.044e-6■■■■□ 26.1
U2AF2P26368 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.684e-6■■■■□ 26.1
U2AF2P26368 EXOSC7-210ENST00000491476 1395 ntTSL 516.32■□□□□ 0.24e-6■■■■□ 26.1
U2AF2P26368 EXOSC7-203ENST00000461361 1593 ntTSL 216.27■□□□□ 0.24e-6■■■■□ 26.1
U2AF2P26368 EXOSC7-205ENST00000468667 831 ntTSL 513.53□□□□□ -0.244e-6■■■■□ 26.1
U2AF2P26368 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.254e-6■■■■□ 26.1
U2AF2P26368 EXOSC7-208ENST00000482004 559 ntTSL 410.93□□□□□ -0.664e-6■■■■□ 26.1
U2AF2P26368 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.175e-7■■■■□ 26
U2AF2P26368 N4BP2-202ENST00000511480 9747 ntTSL 1 (best)5.11□□□□□ -1.595e-7■■■■□ 26
U2AF2P26368 USP8-203ENST00000419830 2402 ntTSL 210.72□□□□□ -0.692e-8■■■■□ 26
U2AF2P26368 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.382e-8■■■■□ 26
U2AF2P26368 USP8-210ENST00000560379 737 ntTSL 26.09□□□□□ -1.432e-8■■■■□ 26
U2AF2P26368 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.62□□□□□ -1.512e-8■■■■□ 26
U2AF2P26368 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.552e-8■■■■□ 26
U2AF2P26368 ANKZF1-219ENST00000483188 529 ntTSL 212.99□□□□□ -0.334e-15■■■■□ 26
U2AF2P26368 ADD3-212ENST00000486014 317 ntTSL 35.29□□□□□ -1.567e-11■■■■□ 26
U2AF2P26368 ADD3-216ENST00000488837 590 ntTSL 35.29□□□□□ -1.567e-11■■■■□ 26
Retrieved 100 of 36,523 protein–RNA pairs in 542.5 ms