RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 AEBP2Q6ZN18 517 aaPredicted RBP26.33■■□□□ 1.81
NUP58-210ENST00000477876 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
NUP58-210ENST00000477876 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
NUP58-210ENST00000477876 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
NUP58-210ENST00000477876 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
NUP58-210ENST00000477876 FOXD1Q16676 465 aa20.89■□□□□ 0.93
NUP58-210ENST00000477876 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
NUP58-210ENST00000477876 MSH5O43196 834 aa20.07■□□□□ 0.8
NUP58-210ENST00000477876 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
NUP58-210ENST00000477876 ADRA2BP18089 450 aa19.8■□□□□ 0.76
NUP58-210ENST00000477876 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
NUP58-210ENST00000477876 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
NUP58-210ENST00000477876 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
NUP58-210ENST00000477876 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
NUP58-210ENST00000477876 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
NUP58-210ENST00000477876 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
NUP58-210ENST00000477876 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
NUP58-210ENST00000477876 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
NUP58-210ENST00000477876 KCNA4P22459 653 aa17.41■□□□□ 0.38
NUP58-210ENST00000477876 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
NUP58-210ENST00000477876 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
NUP58-210ENST00000477876 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
NUP58-210ENST00000477876 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
NUP58-210ENST00000477876 RNF39Q9H2S5 420 aa17■□□□□ 0.31
NUP58-210ENST00000477876 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
NUP58-210ENST00000477876 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
NUP58-210ENST00000477876 POTEHQ6S545 545 aa16.65■□□□□ 0.26
NUP58-210ENST00000477876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■□□□□ 11
NUP58-210ENST00000477876 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
NUP58-210ENST00000477876 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
NUP58-210ENST00000477876 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
NUP58-210ENST00000477876 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
NUP58-210ENST00000477876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
NUP58-210ENST00000477876 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
NUP58-210ENST00000477876 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
NUP58-210ENST00000477876 ZBTB22O15209 634 aa16■□□□□ 0.15
NUP58-210ENST00000477876 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
NUP58-210ENST00000477876 APLP2Q06481 763 aa15.9■□□□□ 0.14
NUP58-210ENST00000477876 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
NUP58-210ENST00000477876 CAPN15O75808 1086 aa15.84■□□□□ 0.13
NUP58-210ENST00000477876 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
NUP58-210ENST00000477876 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
NUP58-210ENST00000477876 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
NUP58-210ENST00000477876 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
NUP58-210ENST00000477876 DSG3P32926 999 aa15.63■□□□□ 0.09
NUP58-210ENST00000477876 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
NUP58-210ENST00000477876 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
NUP58-210ENST00000477876 ABCB7O75027 752 aa15.5■□□□□ 0.07
NUP58-210ENST00000477876 POLA2Q14181 598 aa15.41■□□□□ 0.06
NUP58-210ENST00000477876 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
NUP58-210ENST00000477876 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
NUP58-210ENST00000477876 FBLN2P98095 1184 aa14.97□□□□□ -0.01
NUP58-210ENST00000477876 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
NUP58-210ENST00000477876 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
NUP58-210ENST00000477876 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
NUP58-210ENST00000477876 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
NUP58-210ENST00000477876 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
NUP58-210ENST00000477876 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
NUP58-210ENST00000477876 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
NUP58-210ENST00000477876 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
NUP58-210ENST00000477876 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
NUP58-210ENST00000477876 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
NUP58-210ENST00000477876 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
NUP58-210ENST00000477876 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
NUP58-210ENST00000477876 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUP58-210ENST00000477876 HAX1O00165 279 aa14.37□□□□□ -0.11
NUP58-210ENST00000477876 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
NUP58-210ENST00000477876 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
NUP58-210ENST00000477876 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
NUP58-210ENST00000477876 NISCHQ9Y2I1 1504 aa14.28□□□□□ -0.12
NUP58-210ENST00000477876 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
NUP58-210ENST00000477876 FKBP8Q14318 412 aa14.23□□□□□ -0.13
NUP58-210ENST00000477876 PROM2Q8N271 834 aa14.17□□□□□ -0.14
NUP58-210ENST00000477876 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUP58-210ENST00000477876 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
NUP58-210ENST00000477876 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
NUP58-210ENST00000477876 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
NUP58-210ENST00000477876 EVX2Q03828 476 aa14.08□□□□□ -0.16
NUP58-210ENST00000477876 LHX8Q68G74 356 aa14.08□□□□□ -0.16
NUP58-210ENST00000477876 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
NUP58-210ENST00000477876 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
NUP58-210ENST00000477876 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
NUP58-210ENST00000477876 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
NUP58-210ENST00000477876 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
NUP58-210ENST00000477876 MIER1Q8N108 512 aa13.76□□□□□ -0.21
NUP58-210ENST00000477876 GABBR2O75899 941 aa13.74□□□□□ -0.21
NUP58-210ENST00000477876 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
NUP58-210ENST00000477876 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
NUP58-210ENST00000477876 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
NUP58-210ENST00000477876 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
NUP58-210ENST00000477876 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
NUP58-210ENST00000477876 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
NUP58-210ENST00000477876 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
NUP58-210ENST00000477876 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
NUP58-210ENST00000477876 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
NUP58-210ENST00000477876 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
NUP58-210ENST00000477876 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
NUP58-210ENST00000477876 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
NUP58-210ENST00000477876 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
NUP58-210ENST00000477876 NUBP1P53384 320 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms