RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
VPS8-214ENST00000458721 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
VPS8-214ENST00000458721 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
VPS8-214ENST00000458721 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
VPS8-214ENST00000458721 FOXD1Q16676 465 aa14.96□□□□□ -0.01
VPS8-214ENST00000458721 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
VPS8-214ENST00000458721 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
VPS8-214ENST00000458721 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
VPS8-214ENST00000458721 ADRA2BP18089 450 aa14.08□□□□□ -0.16
VPS8-214ENST00000458721 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
VPS8-214ENST00000458721 MSH5O43196 834 aa13.99□□□□□ -0.17
VPS8-214ENST00000458721 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
VPS8-214ENST00000458721 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
VPS8-214ENST00000458721 ABCC9O60706 1549 aa13.08□□□□□ -0.31
VPS8-214ENST00000458721 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
VPS8-214ENST00000458721 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
VPS8-214ENST00000458721 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
VPS8-214ENST00000458721 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
VPS8-214ENST00000458721 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
VPS8-214ENST00000458721 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
VPS8-214ENST00000458721 NACADO15069 1562 aa12.45□□□□□ -0.42
VPS8-214ENST00000458721 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
VPS8-214ENST00000458721 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
VPS8-214ENST00000458721 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
VPS8-214ENST00000458721 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
VPS8-214ENST00000458721 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
VPS8-214ENST00000458721 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
VPS8-214ENST00000458721 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
VPS8-214ENST00000458721 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
VPS8-214ENST00000458721 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
VPS8-214ENST00000458721 BICRAQ9NZM4 1560 aa12.14□□□□□ -0.47
VPS8-214ENST00000458721 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
VPS8-214ENST00000458721 KCNA4P22459 653 aa12.08□□□□□ -0.48
VPS8-214ENST00000458721 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
VPS8-214ENST00000458721 DCAF8L2P0C7V8 631 aa12.03□□□□□ -0.48
VPS8-214ENST00000458721 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.48
VPS8-214ENST00000458721 RNF39Q9H2S5 420 aa11.92□□□□□ -0.5
VPS8-214ENST00000458721 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
VPS8-214ENST00000458721 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
VPS8-214ENST00000458721 EIF4G1Q04637 1599 aaKnown RBP11.87□□□□□ -0.51
VPS8-214ENST00000458721 SCRIBQ14160 1630 aa11.86□□□□□ -0.51
VPS8-214ENST00000458721 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
VPS8-214ENST00000458721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS8-214ENST00000458721 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
VPS8-214ENST00000458721 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
VPS8-214ENST00000458721 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
VPS8-214ENST00000458721 CUX2O14529 1486 aa11.48□□□□□ -0.57
VPS8-214ENST00000458721 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
VPS8-214ENST00000458721 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
VPS8-214ENST00000458721 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
VPS8-214ENST00000458721 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
VPS8-214ENST00000458721 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
VPS8-214ENST00000458721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
VPS8-214ENST00000458721 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
VPS8-214ENST00000458721 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
VPS8-214ENST00000458721 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
VPS8-214ENST00000458721 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
VPS8-214ENST00000458721 CAPN15O75808 1086 aa11.34□□□□□ -0.59
VPS8-214ENST00000458721 APLP2Q06481 763 aa11.34□□□□□ -0.59
VPS8-214ENST00000458721 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
VPS8-214ENST00000458721 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
VPS8-214ENST00000458721 BAZ1AQ9NRL2 1556 aaPredicted RBP11.31□□□□□ -0.6
VPS8-214ENST00000458721 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
VPS8-214ENST00000458721 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
VPS8-214ENST00000458721 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
VPS8-214ENST00000458721 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
VPS8-214ENST00000458721 THOC2Q8NI27 1593 aaKnown RBP11.25□□□□□ -0.61
VPS8-214ENST00000458721 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
VPS8-214ENST00000458721 DSG3P32926 999 aa11.21□□□□□ -0.61
VPS8-214ENST00000458721 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
VPS8-214ENST00000458721 NESP48681 1621 aa11.2□□□□□ -0.62
VPS8-214ENST00000458721 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
VPS8-214ENST00000458721 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
VPS8-214ENST00000458721 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
VPS8-214ENST00000458721 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
VPS8-214ENST00000458721 ZBTB22O15209 634 aa11.09□□□□□ -0.63
VPS8-214ENST00000458721 ABCB7O75027 752 aa11.07□□□□□ -0.64
VPS8-214ENST00000458721 WDR62O43379 1518 aa11.07□□□□□ -0.64
VPS8-214ENST00000458721 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
VPS8-214ENST00000458721 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
VPS8-214ENST00000458721 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
VPS8-214ENST00000458721 WIZO95785 1651 aa10.98□□□□□ -0.65
VPS8-214ENST00000458721 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
VPS8-214ENST00000458721 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
VPS8-214ENST00000458721 CFTRP13569 1480 aa10.93□□□□□ -0.66
VPS8-214ENST00000458721 POLA2Q14181 598 aa10.93□□□□□ -0.66
VPS8-214ENST00000458721 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
VPS8-214ENST00000458721 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
VPS8-214ENST00000458721 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.66
VPS8-214ENST00000458721 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
VPS8-214ENST00000458721 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
VPS8-214ENST00000458721 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
VPS8-214ENST00000458721 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
VPS8-214ENST00000458721 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
VPS8-214ENST00000458721 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
VPS8-214ENST00000458721 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
VPS8-214ENST00000458721 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
VPS8-214ENST00000458721 RIMBP3CA6NJZ7 1639 aa10.74□□□□□ -0.69
VPS8-214ENST00000458721 RIMBP3BA6NNM3 1639 aa10.74□□□□□ -0.69
VPS8-214ENST00000458721 RIMBP3Q9UFD9 1639 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms