RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
CPEB4-203ENST00000517880 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
CPEB4-203ENST00000517880 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
CPEB4-203ENST00000517880 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
CPEB4-203ENST00000517880 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
CPEB4-203ENST00000517880 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
CPEB4-203ENST00000517880 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
CPEB4-203ENST00000517880 FOXD1Q16676 465 aa20.45■□□□□ 0.86
CPEB4-203ENST00000517880 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
CPEB4-203ENST00000517880 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
CPEB4-203ENST00000517880 MSH5O43196 834 aa19.52■□□□□ 0.72
CPEB4-203ENST00000517880 DCAF8L2P0C7V8 631 aa19.49■□□□□ 0.71
CPEB4-203ENST00000517880 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
CPEB4-203ENST00000517880 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
CPEB4-203ENST00000517880 ABCC9O60706 1549 aa19.19■□□□□ 0.66
CPEB4-203ENST00000517880 NACADO15069 1562 aa19.17■□□□□ 0.66
CPEB4-203ENST00000517880 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
CPEB4-203ENST00000517880 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
CPEB4-203ENST00000517880 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
CPEB4-203ENST00000517880 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
CPEB4-203ENST00000517880 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
CPEB4-203ENST00000517880 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
CPEB4-203ENST00000517880 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
CPEB4-203ENST00000517880 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
CPEB4-203ENST00000517880 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
CPEB4-203ENST00000517880 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
CPEB4-203ENST00000517880 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
CPEB4-203ENST00000517880 ADRA2BP18089 450 aa18.23■□□□□ 0.51
CPEB4-203ENST00000517880 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
CPEB4-203ENST00000517880 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
CPEB4-203ENST00000517880 WIZO95785 1651 aa18.14■□□□□ 0.5
CPEB4-203ENST00000517880 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
CPEB4-203ENST00000517880 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
CPEB4-203ENST00000517880 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
CPEB4-203ENST00000517880 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
CPEB4-203ENST00000517880 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
CPEB4-203ENST00000517880 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.44
CPEB4-203ENST00000517880 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
CPEB4-203ENST00000517880 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
CPEB4-203ENST00000517880 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
CPEB4-203ENST00000517880 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
CPEB4-203ENST00000517880 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
CPEB4-203ENST00000517880 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
CPEB4-203ENST00000517880 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
CPEB4-203ENST00000517880 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
CPEB4-203ENST00000517880 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
CPEB4-203ENST00000517880 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
CPEB4-203ENST00000517880 EEA1Q15075 1411 aa17.36■□□□□ 0.37
CPEB4-203ENST00000517880 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
CPEB4-203ENST00000517880 CFTRP13569 1480 aa17.33■□□□□ 0.37
CPEB4-203ENST00000517880 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
CPEB4-203ENST00000517880 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
CPEB4-203ENST00000517880 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
CPEB4-203ENST00000517880 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
CPEB4-203ENST00000517880 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
CPEB4-203ENST00000517880 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.34
CPEB4-203ENST00000517880 SOGA1O94964 1423 aa17.2■□□□□ 0.34
CPEB4-203ENST00000517880 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
CPEB4-203ENST00000517880 CUX1P39880 1505 aa17.09■□□□□ 0.33
CPEB4-203ENST00000517880 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
CPEB4-203ENST00000517880 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.33
CPEB4-203ENST00000517880 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
CPEB4-203ENST00000517880 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
CPEB4-203ENST00000517880 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
CPEB4-203ENST00000517880 KIF21BO75037 1637 aa17.05■□□□□ 0.32
CPEB4-203ENST00000517880 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
CPEB4-203ENST00000517880 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.31
CPEB4-203ENST00000517880 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
CPEB4-203ENST00000517880 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
CPEB4-203ENST00000517880 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
CPEB4-203ENST00000517880 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
CPEB4-203ENST00000517880 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
CPEB4-203ENST00000517880 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
CPEB4-203ENST00000517880 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
CPEB4-203ENST00000517880 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
CPEB4-203ENST00000517880 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
CPEB4-203ENST00000517880 NESP48681 1621 aa16.9■□□□□ 0.3
CPEB4-203ENST00000517880 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
CPEB4-203ENST00000517880 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
CPEB4-203ENST00000517880 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
CPEB4-203ENST00000517880 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
CPEB4-203ENST00000517880 CUX2O14529 1486 aa16.82■□□□□ 0.28
CPEB4-203ENST00000517880 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
CPEB4-203ENST00000517880 IGF1RP08069 1367 aa16.78■□□□□ 0.28
CPEB4-203ENST00000517880 CLIP1P30622 1438 aa16.78■□□□□ 0.28
CPEB4-203ENST00000517880 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
CPEB4-203ENST00000517880 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.27
CPEB4-203ENST00000517880 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
CPEB4-203ENST00000517880 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
CPEB4-203ENST00000517880 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
CPEB4-203ENST00000517880 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
CPEB4-203ENST00000517880 HRCP23327 699 aa16.67■□□□□ 0.26
CPEB4-203ENST00000517880 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
CPEB4-203ENST00000517880 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
CPEB4-203ENST00000517880 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
CPEB4-203ENST00000517880 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
CPEB4-203ENST00000517880 CUL7Q14999 1698 aa16.64■□□□□ 0.25
CPEB4-203ENST00000517880 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
CPEB4-203ENST00000517880 APLP2Q06481 763 aa16.59■□□□□ 0.25
CPEB4-203ENST00000517880 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms