RNA–Protein interactions for RNA: ENST00000519467.1

CPEB4-206, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 5

Gene CPEB4, Length 1,348 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-206ENST00000519467 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
CPEB4-206ENST00000519467 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CPEB4-206ENST00000519467 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
CPEB4-206ENST00000519467 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
CPEB4-206ENST00000519467 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
CPEB4-206ENST00000519467 ABCC9O60706 1549 aa18.83■□□□□ 0.6
CPEB4-206ENST00000519467 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
CPEB4-206ENST00000519467 FOXD1Q16676 465 aa18.1■□□□□ 0.49
CPEB4-206ENST00000519467 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
CPEB4-206ENST00000519467 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
CPEB4-206ENST00000519467 NACADO15069 1562 aa17.46■□□□□ 0.39
CPEB4-206ENST00000519467 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.38
CPEB4-206ENST00000519467 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
CPEB4-206ENST00000519467 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
CPEB4-206ENST00000519467 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
CPEB4-206ENST00000519467 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
CPEB4-206ENST00000519467 MSH5O43196 834 aa17.15■□□□□ 0.34
CPEB4-206ENST00000519467 MYO15BQ96JP2 1530 aa17.1■□□□□ 0.33
CPEB4-206ENST00000519467 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CPEB4-206ENST00000519467 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
CPEB4-206ENST00000519467 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
CPEB4-206ENST00000519467 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
CPEB4-206ENST00000519467 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
CPEB4-206ENST00000519467 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
CPEB4-206ENST00000519467 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
CPEB4-206ENST00000519467 SCRIBQ14160 1630 aa16.75■□□□□ 0.27
CPEB4-206ENST00000519467 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
CPEB4-206ENST00000519467 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
CPEB4-206ENST00000519467 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
CPEB4-206ENST00000519467 ADRA2BP18089 450 aa16.53■□□□□ 0.24
CPEB4-206ENST00000519467 CUX2O14529 1486 aa16.37■□□□□ 0.21
CPEB4-206ENST00000519467 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
CPEB4-206ENST00000519467 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
CPEB4-206ENST00000519467 NESP48681 1621 aa16.07■□□□□ 0.16
CPEB4-206ENST00000519467 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
CPEB4-206ENST00000519467 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
CPEB4-206ENST00000519467 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
CPEB4-206ENST00000519467 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
CPEB4-206ENST00000519467 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
CPEB4-206ENST00000519467 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
CPEB4-206ENST00000519467 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
CPEB4-206ENST00000519467 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
CPEB4-206ENST00000519467 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
CPEB4-206ENST00000519467 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.12
CPEB4-206ENST00000519467 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.12
CPEB4-206ENST00000519467 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
CPEB4-206ENST00000519467 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
CPEB4-206ENST00000519467 WDR62O43379 1518 aa15.66■□□□□ 0.1
CPEB4-206ENST00000519467 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
CPEB4-206ENST00000519467 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
CPEB4-206ENST00000519467 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CPEB4-206ENST00000519467 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
CPEB4-206ENST00000519467 FANCD2Q9BXW9 1451 aa15.47■□□□□ 0.07
CPEB4-206ENST00000519467 WIZO95785 1651 aa15.42■□□□□ 0.06
CPEB4-206ENST00000519467 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
CPEB4-206ENST00000519467 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
CPEB4-206ENST00000519467 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
CPEB4-206ENST00000519467 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
CPEB4-206ENST00000519467 CFTRP13569 1480 aa15.39■□□□□ 0.05
CPEB4-206ENST00000519467 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
CPEB4-206ENST00000519467 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
CPEB4-206ENST00000519467 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
CPEB4-206ENST00000519467 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
CPEB4-206ENST00000519467 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
CPEB4-206ENST00000519467 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
CPEB4-206ENST00000519467 CYB5RLQ6IPT4 315 aa15.2■□□□□ 0.02
CPEB4-206ENST00000519467 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
CPEB4-206ENST00000519467 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
CPEB4-206ENST00000519467 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
CPEB4-206ENST00000519467 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
CPEB4-206ENST00000519467 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
CPEB4-206ENST00000519467 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
CPEB4-206ENST00000519467 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
CPEB4-206ENST00000519467 CHD1O14646 1710 aa15.08■□□□□ 0
CPEB4-206ENST00000519467 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■■■■ 29.7
CPEB4-206ENST00000519467 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
CPEB4-206ENST00000519467 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
CPEB4-206ENST00000519467 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
CPEB4-206ENST00000519467 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
CPEB4-206ENST00000519467 FBLN2P98095 1184 aa15.01□□□□□ -0.01
CPEB4-206ENST00000519467 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
CPEB4-206ENST00000519467 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
CPEB4-206ENST00000519467 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
CPEB4-206ENST00000519467 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
CPEB4-206ENST00000519467 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
CPEB4-206ENST00000519467 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
CPEB4-206ENST00000519467 SYNJ1O43426 1573 aa14.86□□□□□ -0.03
CPEB4-206ENST00000519467 SOGA1O94964 1423 aa14.85□□□□□ -0.03
CPEB4-206ENST00000519467 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
CPEB4-206ENST00000519467 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
CPEB4-206ENST00000519467 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
CPEB4-206ENST00000519467 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
CPEB4-206ENST00000519467 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
CPEB4-206ENST00000519467 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
CPEB4-206ENST00000519467 GRIN2BQ13224 1484 aa14.79□□□□□ -0.04
CPEB4-206ENST00000519467 SYNJ2O15056 1496 aa14.78□□□□□ -0.04
CPEB4-206ENST00000519467 CUX1P39880 1505 aa14.73□□□□□ -0.05
CPEB4-206ENST00000519467 ERCC6L2Q5T890 1561 aa14.7□□□□□ -0.06
CPEB4-206ENST00000519467 PBRM1Q86U86 1689 aa14.67□□□□□ -0.06
CPEB4-206ENST00000519467 ABCA5Q8WWZ7 1642 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms