RNA–Protein interactions for RNA: ENST00000591214.5

SMAD2-212, Transcript of SMAD family member 2, humanhuman

TSL 2 BASIC

Gene SMAD2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-212ENST00000591214 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
SMAD2-212ENST00000591214 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
SMAD2-212ENST00000591214 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
SMAD2-212ENST00000591214 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
SMAD2-212ENST00000591214 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
SMAD2-212ENST00000591214 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
SMAD2-212ENST00000591214 ABCC9O60706 1549 aa26.66■■□□□ 1.86
SMAD2-212ENST00000591214 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
SMAD2-212ENST00000591214 NACADO15069 1562 aa26.36■■□□□ 1.81
SMAD2-212ENST00000591214 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
SMAD2-212ENST00000591214 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
SMAD2-212ENST00000591214 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
SMAD2-212ENST00000591214 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
SMAD2-212ENST00000591214 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
SMAD2-212ENST00000591214 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
SMAD2-212ENST00000591214 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
SMAD2-212ENST00000591214 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
SMAD2-212ENST00000591214 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
SMAD2-212ENST00000591214 BAZ1AQ9NRL2 1556 aaPredicted RBP25.15■■□□□ 1.62
SMAD2-212ENST00000591214 SMARCA4P51532 1647 aa25■■□□□ 1.59
SMAD2-212ENST00000591214 WIZO95785 1651 aa24.95■■□□□ 1.58
SMAD2-212ENST00000591214 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SMAD2-212ENST00000591214 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
SMAD2-212ENST00000591214 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
SMAD2-212ENST00000591214 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
SMAD2-212ENST00000591214 SMARCA2P51531 1590 aa24.57■■□□□ 1.52
SMAD2-212ENST00000591214 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
SMAD2-212ENST00000591214 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
SMAD2-212ENST00000591214 BAZ1BQ9UIG0 1483 aaKnown RBP24.44■■□□□ 1.5
SMAD2-212ENST00000591214 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
SMAD2-212ENST00000591214 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
SMAD2-212ENST00000591214 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
SMAD2-212ENST00000591214 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
SMAD2-212ENST00000591214 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
SMAD2-212ENST00000591214 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
SMAD2-212ENST00000591214 CFTRP13569 1480 aa23.84■■□□□ 1.41
SMAD2-212ENST00000591214 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
SMAD2-212ENST00000591214 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
SMAD2-212ENST00000591214 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
SMAD2-212ENST00000591214 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
SMAD2-212ENST00000591214 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
SMAD2-212ENST00000591214 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
SMAD2-212ENST00000591214 EEA1Q15075 1411 aa23.62■■□□□ 1.37
SMAD2-212ENST00000591214 SOGA1O94964 1423 aa23.6■■□□□ 1.37
SMAD2-212ENST00000591214 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SMAD2-212ENST00000591214 CUX1P39880 1505 aa23.53■■□□□ 1.36
SMAD2-212ENST00000591214 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
SMAD2-212ENST00000591214 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
SMAD2-212ENST00000591214 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
SMAD2-212ENST00000591214 NESP48681 1621 aa23.45■■□□□ 1.34
SMAD2-212ENST00000591214 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
SMAD2-212ENST00000591214 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
SMAD2-212ENST00000591214 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
SMAD2-212ENST00000591214 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
SMAD2-212ENST00000591214 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
SMAD2-212ENST00000591214 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
SMAD2-212ENST00000591214 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
SMAD2-212ENST00000591214 KIF21BO75037 1637 aa23.27■■□□□ 1.32
SMAD2-212ENST00000591214 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
SMAD2-212ENST00000591214 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
SMAD2-212ENST00000591214 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
SMAD2-212ENST00000591214 TOPBP1Q92547 1522 aa23.22■■□□□ 1.31
SMAD2-212ENST00000591214 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
SMAD2-212ENST00000591214 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
SMAD2-212ENST00000591214 CUX2O14529 1486 aa23.15■■□□□ 1.3
SMAD2-212ENST00000591214 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
SMAD2-212ENST00000591214 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
SMAD2-212ENST00000591214 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
SMAD2-212ENST00000591214 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
SMAD2-212ENST00000591214 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
SMAD2-212ENST00000591214 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
SMAD2-212ENST00000591214 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
SMAD2-212ENST00000591214 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
SMAD2-212ENST00000591214 IGF1RP08069 1367 aa23.01■■□□□ 1.27
SMAD2-212ENST00000591214 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
SMAD2-212ENST00000591214 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
SMAD2-212ENST00000591214 CLIP1P30622 1438 aa22.92■■□□□ 1.26
SMAD2-212ENST00000591214 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
SMAD2-212ENST00000591214 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
SMAD2-212ENST00000591214 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
SMAD2-212ENST00000591214 WDR62O43379 1518 aa22.86■■□□□ 1.25
SMAD2-212ENST00000591214 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
SMAD2-212ENST00000591214 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
SMAD2-212ENST00000591214 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
SMAD2-212ENST00000591214 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
SMAD2-212ENST00000591214 CUL7Q14999 1698 aa22.81■■□□□ 1.24
SMAD2-212ENST00000591214 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
SMAD2-212ENST00000591214 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
SMAD2-212ENST00000591214 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
SMAD2-212ENST00000591214 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
SMAD2-212ENST00000591214 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
SMAD2-212ENST00000591214 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
SMAD2-212ENST00000591214 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
SMAD2-212ENST00000591214 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMAD2-212ENST00000591214 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
SMAD2-212ENST00000591214 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
SMAD2-212ENST00000591214 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
SMAD2-212ENST00000591214 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
SMAD2-212ENST00000591214 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
SMAD2-212ENST00000591214 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms