RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 MYT1Q01538 1121 aa8.34□□□□□ -1.07
USP8-202ENST00000396444 NISCHQ9Y2I1 1504 aa8.3□□□□□ -1.08
USP8-202ENST00000396444 PELP1Q8IZL8 1130 aaKnown RBP8.14□□□□□ -1.11
USP8-202ENST00000396444 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
USP8-202ENST00000396444 TTBK1Q5TCY1 1321 aaPredicted RBP7.82□□□□□ -1.16
USP8-202ENST00000396444 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
USP8-202ENST00000396444 CLSPNQ9HAW4 1339 aa7.66□□□□□ -1.18
USP8-202ENST00000396444 ACIN1Q9UKV3 1341 aaKnown RBP7.62□□□□□ -1.19
USP8-202ENST00000396444 YTHDC1Q96MU7 727 aaKnown RBP7.6□□□□□ -1.19
USP8-202ENST00000396444 CCER1Q8TC90 406 aaPredicted RBP7.58□□□□□ -1.2
USP8-202ENST00000396444 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
USP8-202ENST00000396444 CCDC180Q9P1Z9 1646 aa7.55□□□□□ -1.2
USP8-202ENST00000396444 CENPBP07199 599 aaPredicted RBP7.51□□□□□ -1.21
USP8-202ENST00000396444 MYT1LQ9UL68 1186 aa7.46□□□□□ -1.22
USP8-202ENST00000396444 APLP2Q06481 763 aa7.38□□□□□ -1.23
USP8-202ENST00000396444 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
USP8-202ENST00000396444 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
USP8-202ENST00000396444 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
USP8-202ENST00000396444 ARID4BQ4LE39 1312 aaPredicted RBP7.17□□□□□ -1.26
USP8-202ENST00000396444 HRCP23327 699 aa7.16□□□□□ -1.26
USP8-202ENST00000396444 EIF5BO60841 1220 aaKnown RBP7.14□□□□□ -1.27
USP8-202ENST00000396444 MYO15BQ96JP2 1530 aa7.13□□□□□ -1.27
USP8-202ENST00000396444 NEFLP07196 543 aa7.11□□□□□ -1.27
USP8-202ENST00000396444 DCAF1Q9Y4B6 1507 aa7.11□□□□□ -1.27
USP8-202ENST00000396444 EEA1Q15075 1411 aa7.1□□□□□ -1.27
USP8-202ENST00000396444 SLC24A1O60721 1099 aa7.1□□□□□ -1.27
USP8-202ENST00000396444 TIMELESSQ9UNS1 1208 aa7.1□□□□□ -1.27
USP8-202ENST00000396444 NEUROD1Q13562 356 aa7.08□□□□□ -1.28
USP8-202ENST00000396444 SCRIBQ14160 1630 aa7.07□□□□□ -1.28
USP8-202ENST00000396444 ABCC9O60706 1549 aa7.06□□□□□ -1.28
USP8-202ENST00000396444 RB1CC1Q8TDY2 1594 aa7.05□□□□□ -1.28
USP8-202ENST00000396444 TRIM41Q8WV44 630 aa7.05□□□□□ -1.28
USP8-202ENST00000396444 SCAF1Q9H7N4 1312 aaKnown RBP7.04□□□□□ -1.28
USP8-202ENST00000396444 ANP32EQ9BTT0 268 aa7.03□□□□□ -1.28
USP8-202ENST00000396444 ERICH6BQ5W0A0 696 aa7.02□□□□□ -1.29
USP8-202ENST00000396444 ERICH6Q7L0X2 663 aa7.01□□□□□ -1.29
USP8-202ENST00000396444 NACADO15069 1562 aa6.92□□□□□ -1.3
USP8-202ENST00000396444 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
USP8-202ENST00000396444 PCGF6Q9BYE7 350 aa6.91□□□□□ -1.3
USP8-202ENST00000396444 EHMT2Q96KQ7 1210 aa6.91□□□□□ -1.3
USP8-202ENST00000396444 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
USP8-202ENST00000396444 CHIC1Q5VXU3 224 aa6.88□□□□□ -1.31
USP8-202ENST00000396444 GLIPR1L2Q4G1C9 344 aa6.87□□□□□ -1.31
USP8-202ENST00000396444 BAZ1BQ9UIG0 1483 aaKnown RBP6.86□□□□□ -1.31
USP8-202ENST00000396444 NEFMP07197 916 aa6.85□□□□□ -1.31
USP8-202ENST00000396444 IL27Q8NEV9 243 aa6.84□□□□□ -1.31
USP8-202ENST00000396444 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
USP8-202ENST00000396444 STAC3Q96MF2 364 aa6.8□□□□□ -1.32
USP8-202ENST00000396444 NGEFQ8N5V2 710 aa6.79□□□□□ -1.32
USP8-202ENST00000396444 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
USP8-202ENST00000396444 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
USP8-202ENST00000396444 CHMP4BQ9H444 224 aaKnown RBP6.76□□□□□ -1.33
USP8-202ENST00000396444 UBTFP17480 764 aaKnown RBP6.76□□□□□ -1.33
USP8-202ENST00000396444 DIEXFQ68CQ4 756 aaKnown RBP6.76□□□□□ -1.33
USP8-202ENST00000396444 ATP1B4Q9UN42 357 aaPredicted RBP6.76□□□□□ -1.33
USP8-202ENST00000396444 NCLP19338 710 aaKnown RBP6.74□□□□□ -1.33
USP8-202ENST00000396444 RANGAP1P46060 587 aaPredicted RBP6.74□□□□□ -1.33
USP8-202ENST00000396444 AAMPQ13685 434 aa6.73□□□□□ -1.33
USP8-202ENST00000396444 USP35Q9P2H5 1018 aa6.72□□□□□ -1.33
USP8-202ENST00000396444 ANP32BQ92688 251 aaKnown RBP6.72□□□□□ -1.33
USP8-202ENST00000396444 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
USP8-202ENST00000396444 ZNF316A6NFI3 1004 aaPredicted RBP6.7□□□□□ -1.34
USP8-202ENST00000396444 PKNOX2Q96KN3 472 aa6.7□□□□□ -1.34
USP8-202ENST00000396444 ANP32CO43423 234 aa6.69□□□□□ -1.34
USP8-202ENST00000396444 HAP1P54257 671 aaPredicted RBP6.69□□□□□ -1.34
USP8-202ENST00000396444 ANO8Q9HCE9 1232 aaPredicted RBP6.68□□□□□ -1.34
USP8-202ENST00000396444 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
USP8-202ENST00000396444 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
USP8-202ENST00000396444 AEBP2Q6ZN18 517 aaPredicted RBP6.67□□□□□ -1.34
USP8-202ENST00000396444 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
USP8-202ENST00000396444 BAZ1AQ9NRL2 1556 aaPredicted RBP6.67□□□□□ -1.34
USP8-202ENST00000396444 ANP32AP39687 249 aaKnown RBP6.67□□□□□ -1.34
USP8-202ENST00000396444 UNC13AQ9UPW8 1703 aa6.67□□□□□ -1.34
USP8-202ENST00000396444 FOXD1Q16676 465 aa6.66□□□□□ -1.34
USP8-202ENST00000396444 PTMSP20962 102 aa6.66□□□□□ -1.34
USP8-202ENST00000396444 CSRNP3Q8WYN3 585 aa6.66□□□□□ -1.34
USP8-202ENST00000396444 TNIKQ9UKE5 1360 aa6.66□□□□□ -1.34
USP8-202ENST00000396444 UPF2Q9HAU5 1272 aaKnown RBP6.65□□□□□ -1.34
USP8-202ENST00000396444 FHAD1B1AJZ9 1412 aa6.65□□□□□ -1.34
USP8-202ENST00000396444 KTN1Q86UP2 1357 aaKnown RBP6.64□□□□□ -1.35
USP8-202ENST00000396444 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
USP8-202ENST00000396444 MS4A1P11836 297 aa6.63□□□□□ -1.35
USP8-202ENST00000396444 WRNQ14191 1432 aaPredicted RBP eCLIP6.63□□□□□ -1.35
USP8-202ENST00000396444 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.63□□□□□ -1.35
USP8-202ENST00000396444 A0A0U1RQG5 324 aaPredicted RBP6.63□□□□□ -1.35
USP8-202ENST00000396444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.62□□□□□ -1.35
USP8-202ENST00000396444 HNRNPUL2Q1KMD3 747 aaKnown RBP6.62□□□□□ -1.35
USP8-202ENST00000396444 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
USP8-202ENST00000396444 SMARCA2P51531 1590 aa6.61□□□□□ -1.35
USP8-202ENST00000396444 PDIA4P13667 645 aaKnown RBP6.6□□□□□ -1.35
USP8-202ENST00000396444 PRKCSHP14314 528 aaPredicted RBP6.6□□□□□ -1.35
USP8-202ENST00000396444 RSPH4AQ5TD94 716 aa6.6□□□□□ -1.35
USP8-202ENST00000396444 PABPN1Q86U42 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP8-202ENST00000396444 DDRGK1Q96HY6 314 aa6.6□□□□□ -1.35
USP8-202ENST00000396444 PHLDB1Q86UU1 1377 aa6.6□□□□□ -1.35
USP8-202ENST00000396444 PRDM2Q13029 1718 aa6.59□□□□□ -1.35
USP8-202ENST00000396444 TRIM44Q96DX7 344 aaPredicted RBP6.59□□□□□ -1.35
USP8-202ENST00000396444 CCER2I3L3R5 266 aa6.58□□□□□ -1.36
USP8-202ENST00000396444 ISY1Q9ULR0 285 aaKnown RBP6.58□□□□□ -1.36
USP8-202ENST00000396444 AKNAQ7Z591 1439 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms