RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
CPEB4-202ENST00000334035 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
CPEB4-202ENST00000334035 MYT1Q01538 1121 aa10.88□□□□□ -0.67
CPEB4-202ENST00000334035 DCAF8L2P0C7V8 631 aa10.62□□□□□ -0.71
CPEB4-202ENST00000334035 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
CPEB4-202ENST00000334035 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
CPEB4-202ENST00000334035 CENPBP07199 599 aaPredicted RBP10.45□□□□□ -0.74
CPEB4-202ENST00000334035 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
CPEB4-202ENST00000334035 PCGF6Q9BYE7 350 aa10.3□□□□□ -0.76
CPEB4-202ENST00000334035 HRCP23327 699 aa10.28□□□□□ -0.76
CPEB4-202ENST00000334035 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
CPEB4-202ENST00000334035 ERICH6Q7L0X2 663 aa10.12□□□□□ -0.79
CPEB4-202ENST00000334035 APLP2Q06481 763 aa10.11□□□□□ -0.79
CPEB4-202ENST00000334035 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
CPEB4-202ENST00000334035 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
CPEB4-202ENST00000334035 TTBK1Q5TCY1 1321 aaPredicted RBP9.99□□□□□ -0.81
CPEB4-202ENST00000334035 NEFLP07196 543 aa9.97□□□□□ -0.81
CPEB4-202ENST00000334035 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
CPEB4-202ENST00000334035 FAM9AQ8IZU1 332 aaPredicted RBP9.89□□□□□ -0.83
CPEB4-202ENST00000334035 YTHDC1Q96MU7 727 aaKnown RBP9.85□□□□□ -0.83
CPEB4-202ENST00000334035 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
CPEB4-202ENST00000334035 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
CPEB4-202ENST00000334035 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.85
CPEB4-202ENST00000334035 DCAF1Q9Y4B6 1507 aa9.7□□□□□ -0.86
CPEB4-202ENST00000334035 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
CPEB4-202ENST00000334035 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
CPEB4-202ENST00000334035 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
CPEB4-202ENST00000334035 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
CPEB4-202ENST00000334035 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
CPEB4-202ENST00000334035 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
CPEB4-202ENST00000334035 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
CPEB4-202ENST00000334035 RANGAP1P46060 587 aaPredicted RBP9.55□□□□□ -0.88
CPEB4-202ENST00000334035 LOC105371045A0A1W2PR82 267 aa9.55□□□□□ -0.88
CPEB4-202ENST00000334035 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
CPEB4-202ENST00000334035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.47□□□□□ -0.89
CPEB4-202ENST00000334035 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.89
CPEB4-202ENST00000334035 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
CPEB4-202ENST00000334035 CCDC180Q9P1Z9 1646 aa9.45□□□□□ -0.9
CPEB4-202ENST00000334035 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
CPEB4-202ENST00000334035 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
CPEB4-202ENST00000334035 ANP32CO43423 234 aa9.36□□□□□ -0.91
CPEB4-202ENST00000334035 ANP32AP39687 249 aaKnown RBP9.31□□□□□ -0.92
CPEB4-202ENST00000334035 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
CPEB4-202ENST00000334035 GLIPR1L2Q4G1C9 344 aa9.3□□□□□ -0.92
CPEB4-202ENST00000334035 ITGAEP38570 1179 aa9.3□□□□□ -0.92
CPEB4-202ENST00000334035 BCANQ96GW7 911 aa9.3□□□□□ -0.92
CPEB4-202ENST00000334035 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
CPEB4-202ENST00000334035 ANP32EQ9BTT0 268 aa9.27□□□□□ -0.93
CPEB4-202ENST00000334035 POLR3GLQ9BT43 218 aa9.24□□□□□ -0.93
CPEB4-202ENST00000334035 FKBP8Q14318 412 aa9.17□□□□□ -0.94
CPEB4-202ENST00000334035 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
CPEB4-202ENST00000334035 EEA1Q15075 1411 aa9.14□□□□□ -0.95
CPEB4-202ENST00000334035 MYO15BQ96JP2 1530 aa9.14□□□□□ -0.95
CPEB4-202ENST00000334035 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
CPEB4-202ENST00000334035 FAM50AQ14320 339 aaKnown RBP9.11□□□□□ -0.95
CPEB4-202ENST00000334035 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
CPEB4-202ENST00000334035 MIER1Q8N108 512 aa9.08□□□□□ -0.96
CPEB4-202ENST00000334035 DDRGK1Q96HY6 314 aa9.07□□□□□ -0.96
CPEB4-202ENST00000334035 ANP32BQ92688 251 aaKnown RBP9.06□□□□□ -0.96
CPEB4-202ENST00000334035 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
CPEB4-202ENST00000334035 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
CPEB4-202ENST00000334035 TONSLQ96HA7 1378 aa9.04□□□□□ -0.96
CPEB4-202ENST00000334035 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
CPEB4-202ENST00000334035 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
CPEB4-202ENST00000334035 PPM1GO15355 546 aaPredicted RBP9.02□□□□□ -0.97
CPEB4-202ENST00000334035 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
CPEB4-202ENST00000334035 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
CPEB4-202ENST00000334035 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
CPEB4-202ENST00000334035 UPF2Q9HAU5 1272 aaKnown RBP9□□□□□ -0.97
CPEB4-202ENST00000334035 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
CPEB4-202ENST00000334035 TNIKQ9UKE5 1360 aa8.99□□□□□ -0.97
CPEB4-202ENST00000334035 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
CPEB4-202ENST00000334035 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.97□□□□□ -0.97
CPEB4-202ENST00000334035 CEP162Q5TB80 1403 aa8.97□□□□□ -0.97
CPEB4-202ENST00000334035 CANXP27824 592 aaKnown RBP8.96□□□□□ -0.98
CPEB4-202ENST00000334035 NBR1Q14596 966 aa8.96□□□□□ -0.98
CPEB4-202ENST00000334035 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.98
CPEB4-202ENST00000334035 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
CPEB4-202ENST00000334035 CLIP1P30622 1438 aa8.95□□□□□ -0.98
CPEB4-202ENST00000334035 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
CPEB4-202ENST00000334035 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
CPEB4-202ENST00000334035 CCER2I3L3R5 266 aa8.94□□□□□ -0.98
CPEB4-202ENST00000334035 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
CPEB4-202ENST00000334035 RB1CC1Q8TDY2 1594 aa8.93□□□□□ -0.98
CPEB4-202ENST00000334035 BECN1Q14457 450 aa8.92□□□□□ -0.98
CPEB4-202ENST00000334035 CEP164Q9UPV0 1460 aa8.9□□□□□ -0.98
CPEB4-202ENST00000334035 ZNF326Q5BKZ1 582 aaKnown RBP8.9□□□□□ -0.98
CPEB4-202ENST00000334035 RSF1Q96T23 1441 aaPredicted RBP8.89□□□□□ -0.99
CPEB4-202ENST00000334035 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
CPEB4-202ENST00000334035 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
CPEB4-202ENST00000334035 NEFMP07197 916 aa8.87□□□□□ -0.99
CPEB4-202ENST00000334035 TNNT2P45379 298 aaPredicted RBP8.86□□□□□ -0.99
CPEB4-202ENST00000334035 RBM19Q9Y4C8 960 aaKnown RBP8.86□□□□□ -0.99
CPEB4-202ENST00000334035 FAM9BQ8IZU0 186 aa8.85□□□□□ -0.99
CPEB4-202ENST00000334035 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
CPEB4-202ENST00000334035 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.993e-7■■■□□ 17
CPEB4-202ENST00000334035 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
CPEB4-202ENST00000334035 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
CPEB4-202ENST00000334035 L1TD1Q5T7N2 865 aaKnown RBP8.83□□□□□ -1
CPEB4-202ENST00000334035 HSP90AA1P07900 732 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms