RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 MYT1Q01538 1121 aa14.73□□□□□ -0.05
CPEB4-201ENST00000265085 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
CPEB4-201ENST00000265085 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
CPEB4-201ENST00000265085 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
CPEB4-201ENST00000265085 CENPBP07199 599 aaPredicted RBP13.05□□□□□ -0.32
CPEB4-201ENST00000265085 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
CPEB4-201ENST00000265085 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
CPEB4-201ENST00000265085 HRCP23327 699 aa12.67□□□□□ -0.38
CPEB4-201ENST00000265085 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
CPEB4-201ENST00000265085 YTHDC1Q96MU7 727 aaKnown RBP12.62□□□□□ -0.39
CPEB4-201ENST00000265085 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
CPEB4-201ENST00000265085 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
CPEB4-201ENST00000265085 GLIPR1L2Q4G1C9 344 aa12.43□□□□□ -0.42
CPEB4-201ENST00000265085 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
CPEB4-201ENST00000265085 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
CPEB4-201ENST00000265085 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
CPEB4-201ENST00000265085 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.45
CPEB4-201ENST00000265085 NEFLP07196 543 aa12.25□□□□□ -0.45
CPEB4-201ENST00000265085 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
CPEB4-201ENST00000265085 GTF3C3Q9Y5Q9 886 aa12.23□□□□□ -0.45
CPEB4-201ENST00000265085 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
CPEB4-201ENST00000265085 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
CPEB4-201ENST00000265085 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
CPEB4-201ENST00000265085 ANP32EQ9BTT0 268 aa12.08□□□□□ -0.48
CPEB4-201ENST00000265085 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
CPEB4-201ENST00000265085 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
CPEB4-201ENST00000265085 APLP2Q06481 763 aa11.91□□□□□ -0.5
CPEB4-201ENST00000265085 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
CPEB4-201ENST00000265085 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
CPEB4-201ENST00000265085 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
CPEB4-201ENST00000265085 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
CPEB4-201ENST00000265085 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
CPEB4-201ENST00000265085 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
CPEB4-201ENST00000265085 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
CPEB4-201ENST00000265085 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
CPEB4-201ENST00000265085 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
CPEB4-201ENST00000265085 PKNOX2Q96KN3 472 aa11.67□□□□□ -0.54
CPEB4-201ENST00000265085 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
CPEB4-201ENST00000265085 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
CPEB4-201ENST00000265085 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
CPEB4-201ENST00000265085 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
CPEB4-201ENST00000265085 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
CPEB4-201ENST00000265085 BCANQ96GW7 911 aa11.53□□□□□ -0.56
CPEB4-201ENST00000265085 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
CPEB4-201ENST00000265085 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
CPEB4-201ENST00000265085 NBR1Q14596 966 aa11.48□□□□□ -0.57
CPEB4-201ENST00000265085 POLR3GLQ9BT43 218 aa11.46□□□□□ -0.57
CPEB4-201ENST00000265085 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
CPEB4-201ENST00000265085 UBE2Q2Q8WVN8 375 aa11.45□□□□□ -0.58
CPEB4-201ENST00000265085 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
CPEB4-201ENST00000265085 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
CPEB4-201ENST00000265085 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.59
CPEB4-201ENST00000265085 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
CPEB4-201ENST00000265085 TRIM44Q96DX7 344 aaPredicted RBP11.36□□□□□ -0.59
CPEB4-201ENST00000265085 A0A0U1RQG5 324 aaPredicted RBP11.36□□□□□ -0.59
CPEB4-201ENST00000265085 NEFMP07197 916 aa11.35□□□□□ -0.59
CPEB4-201ENST00000265085 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
CPEB4-201ENST00000265085 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
CPEB4-201ENST00000265085 CNGB1Q14028 1251 aaPredicted RBP11.32□□□□□ -0.6
CPEB4-201ENST00000265085 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
CPEB4-201ENST00000265085 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
CPEB4-201ENST00000265085 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
CPEB4-201ENST00000265085 PDE4CQ08493 712 aa11.3□□□□□ -0.6
CPEB4-201ENST00000265085 NAP1L5Q96NT1 182 aaPredicted RBP11.3□□□□□ -0.6
CPEB4-201ENST00000265085 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
CPEB4-201ENST00000265085 FKBP8Q14318 412 aa11.26□□□□□ -0.61
CPEB4-201ENST00000265085 PTMSP20962 102 aa11.25□□□□□ -0.61
CPEB4-201ENST00000265085 HSP90AA2PQ14568 343 aaPredicted RBP11.24□□□□□ -0.61
CPEB4-201ENST00000265085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
CPEB4-201ENST00000265085 CCDC180Q9P1Z9 1646 aa11.21□□□□□ -0.61
CPEB4-201ENST00000265085 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
CPEB4-201ENST00000265085 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
CPEB4-201ENST00000265085 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
CPEB4-201ENST00000265085 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
CPEB4-201ENST00000265085 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
CPEB4-201ENST00000265085 ARXQ96QS3 562 aa11.14□□□□□ -0.63
CPEB4-201ENST00000265085 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
CPEB4-201ENST00000265085 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
CPEB4-201ENST00000265085 RBM19Q9Y4C8 960 aaKnown RBP11.13□□□□□ -0.63
CPEB4-201ENST00000265085 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
CPEB4-201ENST00000265085 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
CPEB4-201ENST00000265085 HOMEZQ8IX15 550 aa11.11□□□□□ -0.63
CPEB4-201ENST00000265085 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
CPEB4-201ENST00000265085 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
CPEB4-201ENST00000265085 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
CPEB4-201ENST00000265085 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
CPEB4-201ENST00000265085 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
CPEB4-201ENST00000265085 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
CPEB4-201ENST00000265085 APPP05067 770 aa11.05□□□□□ -0.64
CPEB4-201ENST00000265085 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
CPEB4-201ENST00000265085 DDRGK1Q96HY6 314 aa11.04□□□□□ -0.64
CPEB4-201ENST00000265085 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
CPEB4-201ENST00000265085 ANP32CO43423 234 aa11□□□□□ -0.65
CPEB4-201ENST00000265085 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
CPEB4-201ENST00000265085 ITGAEP38570 1179 aa11□□□□□ -0.65
CPEB4-201ENST00000265085 CHIC1Q5VXU3 224 aa10.99□□□□□ -0.65
CPEB4-201ENST00000265085 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
CPEB4-201ENST00000265085 DNTTIP2Q5QJE6 756 aaKnown RBP10.98□□□□□ -0.65
CPEB4-201ENST00000265085 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
CPEB4-201ENST00000265085 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms