RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
VPS8-210ENST00000446204 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
VPS8-210ENST00000446204 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
VPS8-210ENST00000446204 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
VPS8-210ENST00000446204 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
VPS8-210ENST00000446204 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
VPS8-210ENST00000446204 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
VPS8-210ENST00000446204 HRCP23327 699 aa12.51□□□□□ -0.41
VPS8-210ENST00000446204 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
VPS8-210ENST00000446204 CHIC1Q5VXU3 224 aa12.49□□□□□ -0.41
VPS8-210ENST00000446204 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
VPS8-210ENST00000446204 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
VPS8-210ENST00000446204 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
VPS8-210ENST00000446204 APLP2Q06481 763 aa12.31□□□□□ -0.44
VPS8-210ENST00000446204 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
VPS8-210ENST00000446204 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
VPS8-210ENST00000446204 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
VPS8-210ENST00000446204 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
VPS8-210ENST00000446204 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.46
VPS8-210ENST00000446204 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
VPS8-210ENST00000446204 ZCCHC6Q5VYS8 1495 aaKnown RBP12.06□□□□□ -0.48
VPS8-210ENST00000446204 RANGAP1P46060 587 aaPredicted RBP12.04□□□□□ -0.48
VPS8-210ENST00000446204 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
VPS8-210ENST00000446204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
VPS8-210ENST00000446204 DCAF1Q9Y4B6 1507 aa11.9□□□□□ -0.5
VPS8-210ENST00000446204 MYT1Q01538 1121 aa11.87□□□□□ -0.51
VPS8-210ENST00000446204 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
VPS8-210ENST00000446204 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
VPS8-210ENST00000446204 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
VPS8-210ENST00000446204 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
VPS8-210ENST00000446204 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
VPS8-210ENST00000446204 ABCC9O60706 1549 aa11.75□□□□□ -0.53
VPS8-210ENST00000446204 NEFLP07196 543 aa11.71□□□□□ -0.53
VPS8-210ENST00000446204 ITGAEP38570 1179 aa11.67□□□□□ -0.54
VPS8-210ENST00000446204 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
VPS8-210ENST00000446204 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
VPS8-210ENST00000446204 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.55
VPS8-210ENST00000446204 ACIN1Q9UKV3 1341 aaKnown RBP11.64□□□□□ -0.55
VPS8-210ENST00000446204 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
VPS8-210ENST00000446204 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
VPS8-210ENST00000446204 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS8-210ENST00000446204 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
VPS8-210ENST00000446204 SCAF1Q9H7N4 1312 aaKnown RBP11.48□□□□□ -0.57
VPS8-210ENST00000446204 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
VPS8-210ENST00000446204 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
VPS8-210ENST00000446204 RB1CC1Q8TDY2 1594 aa11.39□□□□□ -0.59
VPS8-210ENST00000446204 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
VPS8-210ENST00000446204 EEA1Q15075 1411 aa11.33□□□□□ -0.6
VPS8-210ENST00000446204 ANP32CO43423 234 aa11.33□□□□□ -0.6
VPS8-210ENST00000446204 BCANQ96GW7 911 aa11.32□□□□□ -0.6
VPS8-210ENST00000446204 CLSPNQ9HAW4 1339 aa11.32□□□□□ -0.6
VPS8-210ENST00000446204 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
VPS8-210ENST00000446204 NACADO15069 1562 aa11.31□□□□□ -0.6
VPS8-210ENST00000446204 MIER1Q8N108 512 aa11.29□□□□□ -0.6
VPS8-210ENST00000446204 TNIKQ9UKE5 1360 aa11.29□□□□□ -0.6
VPS8-210ENST00000446204 CLIP1P30622 1438 aa11.29□□□□□ -0.6
VPS8-210ENST00000446204 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
VPS8-210ENST00000446204 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
VPS8-210ENST00000446204 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
VPS8-210ENST00000446204 CNGB1Q14028 1251 aaPredicted RBP11.24□□□□□ -0.61
VPS8-210ENST00000446204 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
VPS8-210ENST00000446204 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
VPS8-210ENST00000446204 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.61
VPS8-210ENST00000446204 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
VPS8-210ENST00000446204 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
VPS8-210ENST00000446204 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
VPS8-210ENST00000446204 DDX10Q13206 875 aaKnown RBP11.17□□□□□ -0.62
VPS8-210ENST00000446204 FKBP8Q14318 412 aa11.16□□□□□ -0.62
VPS8-210ENST00000446204 SOGA1O94964 1423 aa11.15□□□□□ -0.62
VPS8-210ENST00000446204 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
VPS8-210ENST00000446204 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
VPS8-210ENST00000446204 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
VPS8-210ENST00000446204 CCDC88BA6NC98 1476 aa11.09□□□□□ -0.63
VPS8-210ENST00000446204 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
VPS8-210ENST00000446204 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
VPS8-210ENST00000446204 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
VPS8-210ENST00000446204 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS8-210ENST00000446204 WIZO95785 1651 aa11.04□□□□□ -0.64
VPS8-210ENST00000446204 VPS8Q8N3P4 1428 aa11.03□□□□□ -0.64
VPS8-210ENST00000446204 KIF27Q86VH2 1401 aa11.02□□□□□ -0.64
VPS8-210ENST00000446204 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
VPS8-210ENST00000446204 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
VPS8-210ENST00000446204 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
VPS8-210ENST00000446204 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
VPS8-210ENST00000446204 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
VPS8-210ENST00000446204 CCNB3Q8WWL7 1395 aa10.97□□□□□ -0.65
VPS8-210ENST00000446204 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
VPS8-210ENST00000446204 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.65
VPS8-210ENST00000446204 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.66
VPS8-210ENST00000446204 ANP32AP39687 249 aaKnown RBP10.94□□□□□ -0.66
VPS8-210ENST00000446204 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
VPS8-210ENST00000446204 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
VPS8-210ENST00000446204 FBLN2P98095 1184 aa10.92□□□□□ -0.66
VPS8-210ENST00000446204 KANK4Q5T7N3 995 aaPredicted RBP10.92□□□□□ -0.66
VPS8-210ENST00000446204 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS8-210ENST00000446204 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
VPS8-210ENST00000446204 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
VPS8-210ENST00000446204 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
VPS8-210ENST00000446204 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
VPS8-210ENST00000446204 ANP32EQ9BTT0 268 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms