RNA–Protein interactions for RNA: ENST00000356825.8

SMAD2-202, Transcript of SMAD family member 2, humanhuman

TSL 1 (best) BASIC

Gene SMAD2, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-202ENST00000356825 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
SMAD2-202ENST00000356825 PELP1Q8IZL8 1130 aaKnown RBP23.18■■□□□ 1.3
SMAD2-202ENST00000356825 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
SMAD2-202ENST00000356825 FAM9AQ8IZU1 332 aaPredicted RBP22.74■■□□□ 1.23
SMAD2-202ENST00000356825 APLP2Q06481 763 aa22.62■■□□□ 1.21
SMAD2-202ENST00000356825 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
SMAD2-202ENST00000356825 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
SMAD2-202ENST00000356825 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
SMAD2-202ENST00000356825 ERICH6Q7L0X2 663 aa22.16■■□□□ 1.14
SMAD2-202ENST00000356825 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
SMAD2-202ENST00000356825 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
SMAD2-202ENST00000356825 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
SMAD2-202ENST00000356825 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
SMAD2-202ENST00000356825 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
SMAD2-202ENST00000356825 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
SMAD2-202ENST00000356825 NEFLP07196 543 aa21.55■■□□□ 1.04
SMAD2-202ENST00000356825 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
SMAD2-202ENST00000356825 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1.01
SMAD2-202ENST00000356825 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
SMAD2-202ENST00000356825 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
SMAD2-202ENST00000356825 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
SMAD2-202ENST00000356825 YTHDC1Q96MU7 727 aaKnown RBP21.07■□□□□ 0.96
SMAD2-202ENST00000356825 MYT1Q01538 1121 aa21.05■□□□□ 0.96
SMAD2-202ENST00000356825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
SMAD2-202ENST00000356825 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
SMAD2-202ENST00000356825 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
SMAD2-202ENST00000356825 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
SMAD2-202ENST00000356825 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
SMAD2-202ENST00000356825 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
SMAD2-202ENST00000356825 ITGAEP38570 1179 aa20.67■□□□□ 0.9
SMAD2-202ENST00000356825 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
SMAD2-202ENST00000356825 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
SMAD2-202ENST00000356825 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.88
SMAD2-202ENST00000356825 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
SMAD2-202ENST00000356825 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
SMAD2-202ENST00000356825 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
SMAD2-202ENST00000356825 SLC24A1O60721 1099 aa20.35■□□□□ 0.85
SMAD2-202ENST00000356825 BCANQ96GW7 911 aa20.18■□□□□ 0.82
SMAD2-202ENST00000356825 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
SMAD2-202ENST00000356825 NEFMP07197 916 aa20.15■□□□□ 0.82
SMAD2-202ENST00000356825 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SMAD2-202ENST00000356825 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
SMAD2-202ENST00000356825 HRCP23327 699 aa20.06■□□□□ 0.8
SMAD2-202ENST00000356825 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
SMAD2-202ENST00000356825 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
SMAD2-202ENST00000356825 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
SMAD2-202ENST00000356825 FBLN2P98095 1184 aa19.9■□□□□ 0.78
SMAD2-202ENST00000356825 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
SMAD2-202ENST00000356825 ANP32CO43423 234 aa19.89■□□□□ 0.78
SMAD2-202ENST00000356825 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
SMAD2-202ENST00000356825 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
SMAD2-202ENST00000356825 ANP32BQ92688 251 aaKnown RBP19.81■□□□□ 0.76
SMAD2-202ENST00000356825 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
SMAD2-202ENST00000356825 HSP90AA1P07900 732 aaKnown RBP19.74■□□□□ 0.75
SMAD2-202ENST00000356825 ANP32AP39687 249 aaKnown RBP19.69■□□□□ 0.74
SMAD2-202ENST00000356825 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
SMAD2-202ENST00000356825 ABCC9O60706 1549 aa19.62■□□□□ 0.73
SMAD2-202ENST00000356825 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
SMAD2-202ENST00000356825 CDK11BP21127 795 aaKnown RBP19.59■□□□□ 0.73
SMAD2-202ENST00000356825 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
SMAD2-202ENST00000356825 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMAD2-202ENST00000356825 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SMAD2-202ENST00000356825 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
SMAD2-202ENST00000356825 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
SMAD2-202ENST00000356825 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
SMAD2-202ENST00000356825 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
SMAD2-202ENST00000356825 A0A0G2JS52 829 aa19.41■□□□□ 0.7
SMAD2-202ENST00000356825 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMAD2-202ENST00000356825 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.68
SMAD2-202ENST00000356825 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
SMAD2-202ENST00000356825 GTF3C3Q9Y5Q9 886 aa19.32■□□□□ 0.68
SMAD2-202ENST00000356825 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
SMAD2-202ENST00000356825 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
SMAD2-202ENST00000356825 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
SMAD2-202ENST00000356825 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
SMAD2-202ENST00000356825 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
SMAD2-202ENST00000356825 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMAD2-202ENST00000356825 C14orf37Q86TY3 774 aa19.15■□□□□ 0.66
SMAD2-202ENST00000356825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■□□ 16.4
SMAD2-202ENST00000356825 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
SMAD2-202ENST00000356825 HAP1P54257 671 aaPredicted RBP19.1■□□□□ 0.65
SMAD2-202ENST00000356825 TMC1Q8TDI8 760 aa19.1■□□□□ 0.65
SMAD2-202ENST00000356825 ARXQ96QS3 562 aa19.09■□□□□ 0.65
SMAD2-202ENST00000356825 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
SMAD2-202ENST00000356825 NCLP19338 710 aaKnown RBP19.06■□□□□ 0.64
SMAD2-202ENST00000356825 ZRSR1Q15695 479 aaKnown RBP19.06■□□□□ 0.64
SMAD2-202ENST00000356825 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
SMAD2-202ENST00000356825 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMAD2-202ENST00000356825 TULP1O00294 542 aaPredicted RBP19.04■□□□□ 0.64
SMAD2-202ENST00000356825 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
SMAD2-202ENST00000356825 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
SMAD2-202ENST00000356825 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.64
SMAD2-202ENST00000356825 NPHP1O15259 732 aa19.02■□□□□ 0.63
SMAD2-202ENST00000356825 CASC1Q6TDU7 716 aa19■□□□□ 0.63
SMAD2-202ENST00000356825 FKBP8Q14318 412 aa19■□□□□ 0.63
SMAD2-202ENST00000356825 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
SMAD2-202ENST00000356825 NBR1Q14596 966 aa18.96■□□□□ 0.63
SMAD2-202ENST00000356825 BECN1Q14457 450 aa18.95■□□□□ 0.62
SMAD2-202ENST00000356825 GOLGA6L22H0YM25 854 aa18.93■□□□□ 0.62
SMAD2-202ENST00000356825 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms