RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
USP8-203ENST00000419830 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
USP8-203ENST00000419830 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
USP8-203ENST00000419830 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.16
USP8-203ENST00000419830 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
USP8-203ENST00000419830 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
USP8-203ENST00000419830 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
USP8-203ENST00000419830 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
USP8-203ENST00000419830 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
USP8-203ENST00000419830 HRCP23327 699 aa15.22■□□□□ 0.03
USP8-203ENST00000419830 ABCC9O60706 1549 aa15.17■□□□□ 0.02
USP8-203ENST00000419830 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
USP8-203ENST00000419830 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
USP8-203ENST00000419830 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
USP8-203ENST00000419830 SCRIBQ14160 1630 aa15.08■□□□□ 0
USP8-203ENST00000419830 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
USP8-203ENST00000419830 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
USP8-203ENST00000419830 NACADO15069 1562 aa14.86□□□□□ -0.03
USP8-203ENST00000419830 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
USP8-203ENST00000419830 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
USP8-203ENST00000419830 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
USP8-203ENST00000419830 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
USP8-203ENST00000419830 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
USP8-203ENST00000419830 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
USP8-203ENST00000419830 WIZO95785 1651 aa14.69□□□□□ -0.06
USP8-203ENST00000419830 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
USP8-203ENST00000419830 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
USP8-203ENST00000419830 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
USP8-203ENST00000419830 ZEB1P37275 1124 aaPredicted RBP14.51□□□□□ -0.09
USP8-203ENST00000419830 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
USP8-203ENST00000419830 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
USP8-203ENST00000419830 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
USP8-203ENST00000419830 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
USP8-203ENST00000419830 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
USP8-203ENST00000419830 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
USP8-203ENST00000419830 SOGA1O94964 1423 aa14.29□□□□□ -0.12
USP8-203ENST00000419830 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
USP8-203ENST00000419830 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
USP8-203ENST00000419830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
USP8-203ENST00000419830 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
USP8-203ENST00000419830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP8-203ENST00000419830 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
USP8-203ENST00000419830 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
USP8-203ENST00000419830 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
USP8-203ENST00000419830 EEA1Q15075 1411 aa14.18□□□□□ -0.14
USP8-203ENST00000419830 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
USP8-203ENST00000419830 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
USP8-203ENST00000419830 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
USP8-203ENST00000419830 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
USP8-203ENST00000419830 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
USP8-203ENST00000419830 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
USP8-203ENST00000419830 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
USP8-203ENST00000419830 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
USP8-203ENST00000419830 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
USP8-203ENST00000419830 KIF21BO75037 1637 aa14□□□□□ -0.17
USP8-203ENST00000419830 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
USP8-203ENST00000419830 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
USP8-203ENST00000419830 CLIP1P30622 1438 aa13.95□□□□□ -0.18
USP8-203ENST00000419830 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
USP8-203ENST00000419830 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
USP8-203ENST00000419830 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
USP8-203ENST00000419830 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
USP8-203ENST00000419830 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
USP8-203ENST00000419830 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
USP8-203ENST00000419830 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
USP8-203ENST00000419830 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
USP8-203ENST00000419830 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
USP8-203ENST00000419830 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
USP8-203ENST00000419830 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
USP8-203ENST00000419830 APLP2Q06481 763 aa13.77□□□□□ -0.21
USP8-203ENST00000419830 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
USP8-203ENST00000419830 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
USP8-203ENST00000419830 CUX1P39880 1505 aa13.75□□□□□ -0.21
USP8-203ENST00000419830 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
USP8-203ENST00000419830 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
USP8-203ENST00000419830 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
USP8-203ENST00000419830 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
USP8-203ENST00000419830 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
USP8-203ENST00000419830 CFTRP13569 1480 aa13.69□□□□□ -0.22
USP8-203ENST00000419830 MIER1Q8N108 512 aa13.68□□□□□ -0.22
USP8-203ENST00000419830 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
USP8-203ENST00000419830 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
USP8-203ENST00000419830 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
USP8-203ENST00000419830 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
USP8-203ENST00000419830 RRBP1Q9P2E9 1410 aaKnown RBP13.61□□□□□ -0.23
USP8-203ENST00000419830 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
USP8-203ENST00000419830 IGF1RP08069 1367 aa13.57□□□□□ -0.24
USP8-203ENST00000419830 CUX2O14529 1486 aa13.55□□□□□ -0.24
USP8-203ENST00000419830 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
USP8-203ENST00000419830 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
USP8-203ENST00000419830 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
USP8-203ENST00000419830 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
USP8-203ENST00000419830 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
USP8-203ENST00000419830 MAP3K1Q13233 1512 aa13.46□□□□□ -0.25
USP8-203ENST00000419830 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
USP8-203ENST00000419830 ITGAEP38570 1179 aa13.44□□□□□ -0.26
USP8-203ENST00000419830 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
USP8-203ENST00000419830 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
USP8-203ENST00000419830 MAPKBP1O60336 1514 aa13.4□□□□□ -0.26
USP8-203ENST00000419830 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms