RNA–Protein interactions for RNA: ENST00000575870.5

SRRM2-224, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-224ENST00000575870 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
SRRM2-224ENST00000575870 CCDC180Q9P1Z9 1646 aa21.46■■□□□ 1.03
SRRM2-224ENST00000575870 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
SRRM2-224ENST00000575870 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
SRRM2-224ENST00000575870 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
SRRM2-224ENST00000575870 ABCC9O60706 1549 aa20.24■□□□□ 0.83
SRRM2-224ENST00000575870 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
SRRM2-224ENST00000575870 NACADO15069 1562 aa20.04■□□□□ 0.8
SRRM2-224ENST00000575870 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
SRRM2-224ENST00000575870 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
SRRM2-224ENST00000575870 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
SRRM2-224ENST00000575870 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
SRRM2-224ENST00000575870 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
SRRM2-224ENST00000575870 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
SRRM2-224ENST00000575870 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
SRRM2-224ENST00000575870 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
SRRM2-224ENST00000575870 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
SRRM2-224ENST00000575870 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
SRRM2-224ENST00000575870 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
SRRM2-224ENST00000575870 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
SRRM2-224ENST00000575870 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
SRRM2-224ENST00000575870 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
SRRM2-224ENST00000575870 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
SRRM2-224ENST00000575870 WIZO95785 1651 aa18.66■□□□□ 0.58
SRRM2-224ENST00000575870 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
SRRM2-224ENST00000575870 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
SRRM2-224ENST00000575870 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
SRRM2-224ENST00000575870 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
SRRM2-224ENST00000575870 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
SRRM2-224ENST00000575870 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
SRRM2-224ENST00000575870 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.54
SRRM2-224ENST00000575870 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
SRRM2-224ENST00000575870 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
SRRM2-224ENST00000575870 CFTRP13569 1480 aa18.04■□□□□ 0.48
SRRM2-224ENST00000575870 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
SRRM2-224ENST00000575870 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
SRRM2-224ENST00000575870 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
SRRM2-224ENST00000575870 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
SRRM2-224ENST00000575870 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
SRRM2-224ENST00000575870 WRNQ14191 1432 aaPredicted RBP eCLIP17.84■□□□□ 0.45
SRRM2-224ENST00000575870 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
SRRM2-224ENST00000575870 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
SRRM2-224ENST00000575870 NESP48681 1621 aa17.74■□□□□ 0.43
SRRM2-224ENST00000575870 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
SRRM2-224ENST00000575870 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
SRRM2-224ENST00000575870 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
SRRM2-224ENST00000575870 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
SRRM2-224ENST00000575870 CUX1P39880 1505 aa17.67■□□□□ 0.42
SRRM2-224ENST00000575870 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
SRRM2-224ENST00000575870 EEA1Q15075 1411 aa17.62■□□□□ 0.41
SRRM2-224ENST00000575870 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
SRRM2-224ENST00000575870 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
SRRM2-224ENST00000575870 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
SRRM2-224ENST00000575870 SOGA1O94964 1423 aa17.52■□□□□ 0.4
SRRM2-224ENST00000575870 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
SRRM2-224ENST00000575870 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
SRRM2-224ENST00000575870 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
SRRM2-224ENST00000575870 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
SRRM2-224ENST00000575870 WDR62O43379 1518 aa17.42■□□□□ 0.38
SRRM2-224ENST00000575870 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
SRRM2-224ENST00000575870 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
SRRM2-224ENST00000575870 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
SRRM2-224ENST00000575870 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
SRRM2-224ENST00000575870 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SRRM2-224ENST00000575870 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
SRRM2-224ENST00000575870 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
SRRM2-224ENST00000575870 CUX2O14529 1486 aa17.35■□□□□ 0.37
SRRM2-224ENST00000575870 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
SRRM2-224ENST00000575870 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
SRRM2-224ENST00000575870 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
SRRM2-224ENST00000575870 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
SRRM2-224ENST00000575870 KIF21BO75037 1637 aa17.32■□□□□ 0.36
SRRM2-224ENST00000575870 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
SRRM2-224ENST00000575870 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
SRRM2-224ENST00000575870 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
SRRM2-224ENST00000575870 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
SRRM2-224ENST00000575870 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
SRRM2-224ENST00000575870 IGF1RP08069 1367 aa17.27■□□□□ 0.35
SRRM2-224ENST00000575870 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
SRRM2-224ENST00000575870 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
SRRM2-224ENST00000575870 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
SRRM2-224ENST00000575870 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
SRRM2-224ENST00000575870 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
SRRM2-224ENST00000575870 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
SRRM2-224ENST00000575870 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
SRRM2-224ENST00000575870 CUL7Q14999 1698 aa17.15■□□□□ 0.34
SRRM2-224ENST00000575870 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
SRRM2-224ENST00000575870 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
SRRM2-224ENST00000575870 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
SRRM2-224ENST00000575870 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.324e-10■■■■□ 23.3
SRRM2-224ENST00000575870 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
SRRM2-224ENST00000575870 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
SRRM2-224ENST00000575870 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
SRRM2-224ENST00000575870 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
SRRM2-224ENST00000575870 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
SRRM2-224ENST00000575870 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
SRRM2-224ENST00000575870 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
SRRM2-224ENST00000575870 CLIP1P30622 1438 aa16.97■□□□□ 0.31
SRRM2-224ENST00000575870 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
SRRM2-224ENST00000575870 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms