RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
CPEB4-208ENST00000520867 MYT1Q01538 1121 aa22.51■■□□□ 1.19
CPEB4-208ENST00000520867 HRCP23327 699 aa21.91■■□□□ 1.1
CPEB4-208ENST00000520867 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
CPEB4-208ENST00000520867 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
CPEB4-208ENST00000520867 PPARGC1BQ86YN6 1023 aaKnown RBP21.41■■□□□ 1.02
CPEB4-208ENST00000520867 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
CPEB4-208ENST00000520867 BCL11AQ9H165 835 aa21■□□□□ 0.95
CPEB4-208ENST00000520867 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
CPEB4-208ENST00000520867 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
CPEB4-208ENST00000520867 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
CPEB4-208ENST00000520867 APLP2Q06481 763 aa20.65■□□□□ 0.9
CPEB4-208ENST00000520867 ERICH6Q7L0X2 663 aa20.59■□□□□ 0.89
CPEB4-208ENST00000520867 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
CPEB4-208ENST00000520867 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
CPEB4-208ENST00000520867 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
CPEB4-208ENST00000520867 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
CPEB4-208ENST00000520867 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
CPEB4-208ENST00000520867 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
CPEB4-208ENST00000520867 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
CPEB4-208ENST00000520867 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
CPEB4-208ENST00000520867 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
CPEB4-208ENST00000520867 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
CPEB4-208ENST00000520867 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
CPEB4-208ENST00000520867 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
CPEB4-208ENST00000520867 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
CPEB4-208ENST00000520867 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
CPEB4-208ENST00000520867 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
CPEB4-208ENST00000520867 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
CPEB4-208ENST00000520867 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
CPEB4-208ENST00000520867 UBE2Q2Q8WVN8 375 aa19.37■□□□□ 0.69
CPEB4-208ENST00000520867 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
CPEB4-208ENST00000520867 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
CPEB4-208ENST00000520867 YTHDC1Q96MU7 727 aaKnown RBP19.21■□□□□ 0.67
CPEB4-208ENST00000520867 SALL2Q9Y467 1007 aaPredicted RBP19.16■□□□□ 0.66
CPEB4-208ENST00000520867 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
CPEB4-208ENST00000520867 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
CPEB4-208ENST00000520867 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.64
CPEB4-208ENST00000520867 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
CPEB4-208ENST00000520867 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
CPEB4-208ENST00000520867 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
CPEB4-208ENST00000520867 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
CPEB4-208ENST00000520867 PKNOX2Q96KN3 472 aa18.92■□□□□ 0.62
CPEB4-208ENST00000520867 ERICH6BQ5W0A0 696 aa18.85■□□□□ 0.61
CPEB4-208ENST00000520867 MSH5O43196 834 aa18.84■□□□□ 0.61
CPEB4-208ENST00000520867 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
CPEB4-208ENST00000520867 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
CPEB4-208ENST00000520867 MIER1Q8N108 512 aa18.81■□□□□ 0.6
CPEB4-208ENST00000520867 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
CPEB4-208ENST00000520867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CPEB4-208ENST00000520867 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.74■□□□□ 0.59
CPEB4-208ENST00000520867 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
CPEB4-208ENST00000520867 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
CPEB4-208ENST00000520867 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
CPEB4-208ENST00000520867 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
CPEB4-208ENST00000520867 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CPEB4-208ENST00000520867 BCANQ96GW7 911 aa18.46■□□□□ 0.55
CPEB4-208ENST00000520867 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
CPEB4-208ENST00000520867 FKBP8Q14318 412 aa18.26■□□□□ 0.51
CPEB4-208ENST00000520867 ZMYND15Q9H091 742 aa18.24■□□□□ 0.51
CPEB4-208ENST00000520867 NEFLP07196 543 aa18.21■□□□□ 0.51
CPEB4-208ENST00000520867 ITGAEP38570 1179 aa18.19■□□□□ 0.5
CPEB4-208ENST00000520867 NBR1Q14596 966 aa18.19■□□□□ 0.5
CPEB4-208ENST00000520867 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
CPEB4-208ENST00000520867 PDE4CQ08493 712 aa18.09■□□□□ 0.49
CPEB4-208ENST00000520867 VSIG10Q8N0Z9 540 aa18.08■□□□□ 0.49
CPEB4-208ENST00000520867 FGD1P98174 961 aa18.06■□□□□ 0.48
CPEB4-208ENST00000520867 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
CPEB4-208ENST00000520867 GLIPR1L2Q4G1C9 344 aa18.05■□□□□ 0.48
CPEB4-208ENST00000520867 PDIA4P13667 645 aaKnown RBP18.01■□□□□ 0.47
CPEB4-208ENST00000520867 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
CPEB4-208ENST00000520867 AAMPQ13685 434 aa17.99■□□□□ 0.47
CPEB4-208ENST00000520867 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
CPEB4-208ENST00000520867 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
CPEB4-208ENST00000520867 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
CPEB4-208ENST00000520867 RBM10P98175 930 aaKnown RBP17.95■□□□□ 0.46
CPEB4-208ENST00000520867 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
CPEB4-208ENST00000520867 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
CPEB4-208ENST00000520867 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
CPEB4-208ENST00000520867 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
CPEB4-208ENST00000520867 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
CPEB4-208ENST00000520867 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
CPEB4-208ENST00000520867 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
CPEB4-208ENST00000520867 BRPF3Q9ULD4 1205 aa17.84■□□□□ 0.45
CPEB4-208ENST00000520867 WASHC2CQ9Y4E1 1318 aa17.81■□□□□ 0.44
CPEB4-208ENST00000520867 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
CPEB4-208ENST00000520867 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
CPEB4-208ENST00000520867 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
CPEB4-208ENST00000520867 TAF7LQ5H9L4 462 aa17.6■□□□□ 0.41
CPEB4-208ENST00000520867 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
CPEB4-208ENST00000520867 NEFMP07197 916 aa17.59■□□□□ 0.41
CPEB4-208ENST00000520867 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
CPEB4-208ENST00000520867 HSP90AA2PQ14568 343 aaPredicted RBP17.57■□□□□ 0.4
CPEB4-208ENST00000520867 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
CPEB4-208ENST00000520867 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
CPEB4-208ENST00000520867 RRP9O43818 475 aaKnown RBP17.54■□□□□ 0.4
CPEB4-208ENST00000520867 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
CPEB4-208ENST00000520867 IRX6P78412 446 aaPredicted RBP17.52■□□□□ 0.4
CPEB4-208ENST00000520867 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
CPEB4-208ENST00000520867 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms