RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
VPS8-207ENST00000436792 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
VPS8-207ENST00000436792 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
VPS8-207ENST00000436792 APLP2Q06481 763 aa14.69□□□□□ -0.06
VPS8-207ENST00000436792 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
VPS8-207ENST00000436792 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
VPS8-207ENST00000436792 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
VPS8-207ENST00000436792 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
VPS8-207ENST00000436792 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
VPS8-207ENST00000436792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.16
VPS8-207ENST00000436792 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.16
VPS8-207ENST00000436792 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
VPS8-207ENST00000436792 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
VPS8-207ENST00000436792 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
VPS8-207ENST00000436792 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
VPS8-207ENST00000436792 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
VPS8-207ENST00000436792 ABCC9O60706 1549 aa13.74□□□□□ -0.21
VPS8-207ENST00000436792 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
VPS8-207ENST00000436792 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS8-207ENST00000436792 FBLN2P98095 1184 aa13.66□□□□□ -0.22
VPS8-207ENST00000436792 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS8-207ENST00000436792 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
VPS8-207ENST00000436792 BCANQ96GW7 911 aa13.48□□□□□ -0.25
VPS8-207ENST00000436792 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
VPS8-207ENST00000436792 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
VPS8-207ENST00000436792 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
VPS8-207ENST00000436792 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
VPS8-207ENST00000436792 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
VPS8-207ENST00000436792 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
VPS8-207ENST00000436792 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
VPS8-207ENST00000436792 NEFMP07197 916 aa13.15□□□□□ -0.31
VPS8-207ENST00000436792 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
VPS8-207ENST00000436792 ITGAEP38570 1179 aa13.13□□□□□ -0.31
VPS8-207ENST00000436792 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
VPS8-207ENST00000436792 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
VPS8-207ENST00000436792 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
VPS8-207ENST00000436792 NEFLP07196 543 aa13.05□□□□□ -0.32
VPS8-207ENST00000436792 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
VPS8-207ENST00000436792 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
VPS8-207ENST00000436792 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
VPS8-207ENST00000436792 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
VPS8-207ENST00000436792 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
VPS8-207ENST00000436792 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
VPS8-207ENST00000436792 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
VPS8-207ENST00000436792 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
VPS8-207ENST00000436792 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
VPS8-207ENST00000436792 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
VPS8-207ENST00000436792 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
VPS8-207ENST00000436792 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
VPS8-207ENST00000436792 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
VPS8-207ENST00000436792 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
VPS8-207ENST00000436792 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
VPS8-207ENST00000436792 A0A0G2JS52 829 aa12.85□□□□□ -0.35
VPS8-207ENST00000436792 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.35
VPS8-207ENST00000436792 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
VPS8-207ENST00000436792 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
VPS8-207ENST00000436792 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
VPS8-207ENST00000436792 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
VPS8-207ENST00000436792 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
VPS8-207ENST00000436792 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
VPS8-207ENST00000436792 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
VPS8-207ENST00000436792 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
VPS8-207ENST00000436792 CNGB1Q14028 1251 aaPredicted RBP12.72□□□□□ -0.37
VPS8-207ENST00000436792 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
VPS8-207ENST00000436792 MYT1Q01538 1121 aa12.71□□□□□ -0.37
VPS8-207ENST00000436792 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 FOXD1Q16676 465 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
VPS8-207ENST00000436792 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
VPS8-207ENST00000436792 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
VPS8-207ENST00000436792 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
VPS8-207ENST00000436792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS8-207ENST00000436792 NPHP1O15259 732 aa12.57□□□□□ -0.4
VPS8-207ENST00000436792 CANXP27824 592 aaKnown RBP12.57□□□□□ -0.4
VPS8-207ENST00000436792 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
VPS8-207ENST00000436792 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
VPS8-207ENST00000436792 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
VPS8-207ENST00000436792 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
VPS8-207ENST00000436792 NACADO15069 1562 aa12.49□□□□□ -0.41
VPS8-207ENST00000436792 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS8-207ENST00000436792 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
VPS8-207ENST00000436792 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
VPS8-207ENST00000436792 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
VPS8-207ENST00000436792 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
VPS8-207ENST00000436792 MLECQ14165 292 aa12.42□□□□□ -0.42
VPS8-207ENST00000436792 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
VPS8-207ENST00000436792 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
VPS8-207ENST00000436792 ARXQ96QS3 562 aa12.39□□□□□ -0.43
VPS8-207ENST00000436792 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
VPS8-207ENST00000436792 KANK1Q14678 1352 aa12.38□□□□□ -0.43
VPS8-207ENST00000436792 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
VPS8-207ENST00000436792 CCDC9Q9Y3X0 531 aaKnown RBP12.37□□□□□ -0.43
VPS8-207ENST00000436792 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
VPS8-207ENST00000436792 CARMIL2Q6F5E8 1435 aa12.36□□□□□ -0.43
VPS8-207ENST00000436792 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
VPS8-207ENST00000436792 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
VPS8-207ENST00000436792 POGKQ9P215 609 aa12.35□□□□□ -0.43
VPS8-207ENST00000436792 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms