Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 COPB1-211ENST00000534234 1584 ntTSL 58.1□□□□□ -1.111e-14■■■□□ 18.4
NCBP2P52298 COPB1-210ENST00000533533 537 ntTSL 48□□□□□ -1.131e-14■■■□□ 18.4
NCBP2P52298 CREB1-216ENST00000494094 580 ntTSL 25.7□□□□□ -1.52e-8■■■□□ 18.4
NCBP2P52298 CREB1-211ENST00000452474 518 ntTSL 45.7□□□□□ -1.52e-8■■■□□ 18.4
NCBP2P52298 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.713e-7■■■□□ 18.4
NCBP2P52298 COPB1-212ENST00000534771 576 ntTSL 4-0.08□□□□□ -2.421e-14■■■□□ 18.4
NCBP2P52298 KANSL3-202ENST00000416138 552 ntTSL 418.28■□□□□ 0.522e-7■■■□□ 18.4
NCBP2P52298 KANSL3-211ENST00000452268 1448 ntTSL 515.44■□□□□ 0.062e-7■■■□□ 18.4
NCBP2P52298 KANSL3-215ENST00000478492 543 ntTSL 414.26□□□□□ -0.132e-7■■■□□ 18.4
NCBP2P52298 KANSL3-207ENST00000444759 2717 ntTSL 213.77□□□□□ -0.22e-7■■■□□ 18.4
NCBP2P52298 KANSL3-203ENST00000418735 594 ntTSL 411.52□□□□□ -0.572e-7■■■□□ 18.4
NCBP2P52298 KANSL3-209ENST00000448075 701 ntTSL 510.17□□□□□ -0.782e-7■■■□□ 18.4
NCBP2P52298 KANSL3-201ENST00000354204 5253 ntTSL 1 (best)9.82□□□□□ -0.842e-7■■■□□ 18.4
NCBP2P52298 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.872e-7■■■□□ 18.4
NCBP2P52298 KANSL3-204ENST00000420155 5028 ntTSL 1 (best)9.35□□□□□ -0.912e-7■■■□□ 18.4
NCBP2P52298 KANSL3-220ENST00000597150 2811 ntTSL 28.25□□□□□ -1.092e-7■■■□□ 18.4
NCBP2P52298 FOXP1-207ENST00000471386 299 ntTSL 1 (best)23.51■■□□□ 1.353e-7■■■□□ 18.3
NCBP2P52298 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.973e-7■■■□□ 18.3
NCBP2P52298 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.373e-7■■■□□ 18.3
NCBP2P52298 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.173e-7■■■□□ 18.3
NCBP2P52298 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.98□□□□□ -0.173e-7■■■□□ 18.3
NCBP2P52298 PARL-205ENST00000421484 1347 ntTSL 523.28■■□□□ 1.322e-12■■■□□ 18.3
NCBP2P52298 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.162e-12■■■□□ 18.3
NCBP2P52298 PARL-213ENST00000639900 1545 ntTSL 521.93■■□□□ 1.12e-12■■■□□ 18.3
NCBP2P52298 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.13■□□□□ 0.652e-12■■■□□ 18.3
NCBP2P52298 PARL-211ENST00000638817 1534 ntTSL 518.44■□□□□ 0.542e-12■■■□□ 18.3
NCBP2P52298 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.29■□□□□ 0.522e-12■■■□□ 18.3
NCBP2P52298 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.032e-12■■■□□ 18.3
NCBP2P52298 PARL-209ENST00000469056 579 ntTSL 310.97□□□□□ -0.652e-12■■■□□ 18.3
NCBP2P52298 PARL-212ENST00000639100 1513 ntTSL 5 BASIC8.9□□□□□ -0.982e-12■■■□□ 18.3
NCBP2P52298 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■■□□ 18.3
NCBP2P52298 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.273e-6■■■□□ 18.3
NCBP2P52298 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.18■□□□□ 0.183e-6■■■□□ 18.3
NCBP2P52298 USP32-208ENST00000589335 691 ntTSL 518.48■□□□□ 0.556e-7■■■□□ 18.3
NCBP2P52298 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.446e-7■■■□□ 18.3
NCBP2P52298 USP32-207ENST00000588898 578 ntTSL 511.57□□□□□ -0.566e-7■■■□□ 18.3
NCBP2P52298 USP32-211ENST00000590133 2563 ntTSL 29.77□□□□□ -0.846e-7■■■□□ 18.3
NCBP2P52298 ZNF740-204ENST00000552593 966 ntTSL 322.86■■□□□ 1.258e-9■■■□□ 18.3
NCBP2P52298 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.458e-9■■■□□ 18.3
NCBP2P52298 SKI-204ENST00000508416 252 ntTSL 39.79□□□□□ -0.845e-7■■■□□ 18.3
NCBP2P52298 NEU4-211ENST00000435855 2281 ntTSL 220.16■□□□□ 0.823e-7■■■□□ 18.3
NCBP2P52298 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.83e-7■■■□□ 18.3
NCBP2P52298 NEU4-214ENST00000476542 536 ntTSL 219.83■□□□□ 0.773e-7■■■□□ 18.3
NCBP2P52298 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.553e-7■■■□□ 18.3
NCBP2P52298 NEU4-217ENST00000618597 3013 ntTSL 218.14■□□□□ 0.493e-7■■■□□ 18.3
NCBP2P52298 NEU4-206ENST00000415936 860 ntTSL 316.47■□□□□ 0.233e-7■■■□□ 18.3
NCBP2P52298 NEU4-208ENST00000423583 753 ntTSL 516.24■□□□□ 0.193e-7■■■□□ 18.3
NCBP2P52298 PIGF-205ENST00000474980 619 ntTSL 217.4■□□□□ 0.382e-9■■■□□ 18.3
NCBP2P52298 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-9■■■□□ 18.3
NCBP2P52298 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC11.13□□□□□ -0.632e-9■■■□□ 18.3
NCBP2P52298 PIGF-207ENST00000495933 3454 ntTSL 211.07□□□□□ -0.642e-9■■■□□ 18.3
NCBP2P52298 PIGF-203ENST00000412717 737 ntTSL 39.83□□□□□ -0.842e-9■■■□□ 18.3
NCBP2P52298 NADK-206ENST00000464373 722 ntTSL 224.33■■□□□ 1.498e-11■■■□□ 18.2
NCBP2P52298 LNPK-203ENST00000409660 2028 ntTSL 1 (best)24.27■■□□□ 1.482e-10■■■□□ 18.2
NCBP2P52298 NADK-212ENST00000492768 859 ntTSL 324.15■■□□□ 1.468e-11■■■□□ 18.2
NCBP2P52298 NADK-205ENST00000460602 974 ntTSL 224.15■■□□□ 1.468e-11■■■□□ 18.2
NCBP2P52298 LNPK-210ENST00000483230 252 ntTSL 523.76■■□□□ 1.392e-10■■■□□ 18.2
NCBP2P52298 TPR-202ENST00000451586 515 ntTSL 222.62■■□□□ 1.211e-8■■■□□ 18.2
NCBP2P52298 LNPK-202ENST00000392540 528 ntTSL 422.02■■□□□ 1.122e-10■■■□□ 18.2
NCBP2P52298 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.13■□□□□ 0.651e-8■■■□□ 18.2
NCBP2P52298 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.388e-11■■■□□ 18.2
NCBP2P52298 TMPO-208ENST00000548911 540 ntTSL 516.83■□□□□ 0.281e-8■■■□□ 18.2
NCBP2P52298 TMPO-205ENST00000546828 564 ntTSL 516.83■□□□□ 0.281e-8■■■□□ 18.2
NCBP2P52298 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.56■□□□□ 0.241e-8■■■□□ 18.2
NCBP2P52298 NADK-213ENST00000492845 937 ntTSL 215.86■□□□□ 0.138e-11■■■□□ 18.2
NCBP2P52298 TPR-205ENST00000474852 2757 ntTSL 1 (best)15.33■□□□□ 0.041e-8■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-206ENST00000490912 5328 ntTSL 214.57□□□□□ -0.088e-18■■■□□ 18.2
NCBP2P52298 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.48□□□□□ -0.091e-8■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-203ENST00000360787 1724 ntTSL 514.18□□□□□ -0.148e-18■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.64□□□□□ -0.238e-18■■■□□ 18.2
NCBP2P52298 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.281e-8■■■□□ 18.2
NCBP2P52298 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.328e-11■■■□□ 18.2
NCBP2P52298 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.461e-8■■■□□ 18.2
NCBP2P52298 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.71□□□□□ -0.531e-8■■■□□ 18.2
NCBP2P52298 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.648e-11■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.678e-18■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.45□□□□□ -0.748e-18■■■□□ 18.2
NCBP2P52298 LNPK-205ENST00000445472 639 ntTSL 48.46□□□□□ -1.062e-10■■■□□ 18.2
NCBP2P52298 LNPK-206ENST00000466445 554 ntTSL 47.74□□□□□ -1.172e-10■■■□□ 18.2
NCBP2P52298 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.188e-18■■■□□ 18.2
NCBP2P52298 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.212e-10■■■□□ 18.2
NCBP2P52298 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.76□□□□□ -1.492e-10■■■□□ 18.2
NCBP2P52298 RRP7BP-203ENST00000437211 1778 ntTSL 1 (best)18.48■□□□□ 0.551e-9■■■□□ 18.2
NCBP2P52298 PRC1-209ENST00000556129 583 ntTSL 317.55■□□□□ 0.41e-9■■■□□ 18.2
NCBP2P52298 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.34■□□□□ 0.371e-9■■■□□ 18.2
NCBP2P52298 PRC1-207ENST00000555745 582 ntTSL 317.32■□□□□ 0.361e-9■■■□□ 18.2
NCBP2P52298 RNF126-204ENST00000590885 1436 ntTSL 517.16■□□□□ 0.341e-9■■■□□ 18.2
NCBP2P52298 RRP7BP-204ENST00000458605 2332 ntTSL 1 (best)16.23■□□□□ 0.191e-9■■■□□ 18.2
NCBP2P52298 PRC1-213ENST00000557905 571 ntTSL 415.79■□□□□ 0.121e-9■■■□□ 18.2
NCBP2P52298 PRC1-215ENST00000559811 414 ntTSL 314.48□□□□□ -0.091e-9■■■□□ 18.2
NCBP2P52298 RRP7BP-205ENST00000566851 833 ntBASIC14.42□□□□□ -0.11e-9■■■□□ 18.2
NCBP2P52298 PRC1-212ENST00000557763 933 ntTSL 514.41□□□□□ -0.11e-9■■■□□ 18.2
NCBP2P52298 PRC1-205ENST00000553494 717 ntTSL 313.76□□□□□ -0.211e-9■■■□□ 18.2
NCBP2P52298 PRC1-203ENST00000417173 1215 ntTSL 213.64□□□□□ -0.231e-9■■■□□ 18.2
NCBP2P52298 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.61□□□□□ -0.231e-9■■■□□ 18.2
NCBP2P52298 PRC1-218ENST00000560605 576 ntTSL 412.47□□□□□ -0.411e-9■■■□□ 18.2
NCBP2P52298 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.481e-9■■■□□ 18.2
NCBP2P52298 PRC1-208ENST00000555791 660 ntTSL 412□□□□□ -0.491e-9■■■□□ 18.2
NCBP2P52298 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.671e-9■■■□□ 18.2
NCBP2P52298 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC10.21□□□□□ -0.781e-9■■■□□ 18.2
Retrieved 100 of 18,329 protein–RNA pairs in 441.1 ms