RNA–Protein interactions for RNA: ENST00000306465.8

PIGF-202, Transcript of phosphatidylinositol glycan anchor biosynthesis class F, humanhuman

TSL 1 (best) BASIC

Gene PIGF, Length 1,061 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIGF-202ENST00000306465 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
PIGF-202ENST00000306465 ABCC9O60706 1549 aa31.41■■■□□ 2.62
PIGF-202ENST00000306465 AEBP2Q6ZN18 517 aaPredicted RBP31.25■■■□□ 2.59
PIGF-202ENST00000306465 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
PIGF-202ENST00000306465 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
PIGF-202ENST00000306465 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
PIGF-202ENST00000306465 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.34
PIGF-202ENST00000306465 NACADO15069 1562 aa29.23■■■□□ 2.27
PIGF-202ENST00000306465 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
PIGF-202ENST00000306465 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
PIGF-202ENST00000306465 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
PIGF-202ENST00000306465 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
PIGF-202ENST00000306465 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
PIGF-202ENST00000306465 CECR2Q9BXF3 1484 aa28.43■■■□□ 2.14
PIGF-202ENST00000306465 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
PIGF-202ENST00000306465 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
PIGF-202ENST00000306465 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
PIGF-202ENST00000306465 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
PIGF-202ENST00000306465 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
PIGF-202ENST00000306465 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
PIGF-202ENST00000306465 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
PIGF-202ENST00000306465 CUX2O14529 1486 aa27.53■■■□□ 2
PIGF-202ENST00000306465 ERCC6Q03468 1493 aa27.22■■□□□ 1.95
PIGF-202ENST00000306465 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
PIGF-202ENST00000306465 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
PIGF-202ENST00000306465 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
PIGF-202ENST00000306465 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
PIGF-202ENST00000306465 NESP48681 1621 aa26.74■■□□□ 1.87
PIGF-202ENST00000306465 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
PIGF-202ENST00000306465 SENP3Q9H4L4 574 aaPredicted RBP26.7■■□□□ 1.86
PIGF-202ENST00000306465 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
PIGF-202ENST00000306465 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
PIGF-202ENST00000306465 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
PIGF-202ENST00000306465 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
PIGF-202ENST00000306465 KIF21AQ7Z4S6 1674 aa26.48■■□□□ 1.83
PIGF-202ENST00000306465 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
PIGF-202ENST00000306465 PDS5BQ9NTI5 1447 aa26.33■■□□□ 1.81
PIGF-202ENST00000306465 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.8
PIGF-202ENST00000306465 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
PIGF-202ENST00000306465 WDR62O43379 1518 aa26.2■■□□□ 1.79
PIGF-202ENST00000306465 MRC2Q9UBG0 1479 aa26.19■■□□□ 1.78
PIGF-202ENST00000306465 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
PIGF-202ENST00000306465 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
PIGF-202ENST00000306465 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
PIGF-202ENST00000306465 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
PIGF-202ENST00000306465 RIMBP3CA6NJZ7 1639 aa25.87■■□□□ 1.73
PIGF-202ENST00000306465 RIMBP3BA6NNM3 1639 aa25.87■■□□□ 1.73
PIGF-202ENST00000306465 RIMBP3Q9UFD9 1639 aa25.87■■□□□ 1.73
PIGF-202ENST00000306465 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
PIGF-202ENST00000306465 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
PIGF-202ENST00000306465 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
PIGF-202ENST00000306465 WIZO95785 1651 aa25.61■■□□□ 1.69
PIGF-202ENST00000306465 CFTRP13569 1480 aa25.6■■□□□ 1.69
PIGF-202ENST00000306465 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
PIGF-202ENST00000306465 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
PIGF-202ENST00000306465 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
PIGF-202ENST00000306465 TRHP20396 242 aaPredicted RBP25.39■■□□□ 1.66
PIGF-202ENST00000306465 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
PIGF-202ENST00000306465 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
PIGF-202ENST00000306465 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
PIGF-202ENST00000306465 CHD1O14646 1710 aa25.32■■□□□ 1.64
PIGF-202ENST00000306465 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
PIGF-202ENST00000306465 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
PIGF-202ENST00000306465 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
PIGF-202ENST00000306465 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
PIGF-202ENST00000306465 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
PIGF-202ENST00000306465 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
PIGF-202ENST00000306465 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.62e-6■□□□□ 9
PIGF-202ENST00000306465 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
PIGF-202ENST00000306465 FBLN2P98095 1184 aa24.97■■□□□ 1.59
PIGF-202ENST00000306465 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
PIGF-202ENST00000306465 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
PIGF-202ENST00000306465 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
PIGF-202ENST00000306465 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.57
PIGF-202ENST00000306465 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
PIGF-202ENST00000306465 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.56
PIGF-202ENST00000306465 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
PIGF-202ENST00000306465 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
PIGF-202ENST00000306465 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
PIGF-202ENST00000306465 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
PIGF-202ENST00000306465 SOGA1O94964 1423 aa24.69■■□□□ 1.54
PIGF-202ENST00000306465 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
PIGF-202ENST00000306465 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
PIGF-202ENST00000306465 FOXD1Q16676 465 aa24.67■■□□□ 1.54
PIGF-202ENST00000306465 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
PIGF-202ENST00000306465 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
PIGF-202ENST00000306465 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PIGF-202ENST00000306465 KIF13AQ9H1H9 1805 aa24.5■■□□□ 1.51
PIGF-202ENST00000306465 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
PIGF-202ENST00000306465 CUX1P39880 1505 aa24.45■■□□□ 1.5
PIGF-202ENST00000306465 ABCA5Q8WWZ7 1642 aa24.4■■□□□ 1.5
PIGF-202ENST00000306465 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
PIGF-202ENST00000306465 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PIGF-202ENST00000306465 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
PIGF-202ENST00000306465 ILDR1Q86SU0 546 aaPredicted RBP24.31■■□□□ 1.48
PIGF-202ENST00000306465 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
PIGF-202ENST00000306465 NUP160Q12769 1436 aa24.29■■□□□ 1.48
PIGF-202ENST00000306465 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
PIGF-202ENST00000306465 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
PIGF-202ENST00000306465 KDM6BO15054 1643 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms