RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 NISCHQ9Y2I1 1504 aa58.47■■■■■ 6.95
TPR-202ENST00000451586 CCDC180Q9P1Z9 1646 aa51.75■■■■■ 5.88
TPR-202ENST00000451586 ABCC9O60706 1549 aa50.45■■■■■ 5.67
TPR-202ENST00000451586 DCAF8L2P0C7V8 631 aa48.88■■■■■ 5.42
TPR-202ENST00000451586 ZCCHC6Q5VYS8 1495 aaKnown RBP48.75■■■■■ 5.4
TPR-202ENST00000451586 NACADO15069 1562 aa48.62■■■■■ 5.37
TPR-202ENST00000451586 RB1CC1Q8TDY2 1594 aa48.59■■■■■ 5.37
TPR-202ENST00000451586 MYO15BQ96JP2 1530 aa48.39■■■■■ 5.34
TPR-202ENST00000451586 DCAF1Q9Y4B6 1507 aa48.33■■■■■ 5.33
TPR-202ENST00000451586 UNC13AQ9UPW8 1703 aa47.52■■■■■ 5.2
TPR-202ENST00000451586 SCRIBQ14160 1630 aa47.34■■■■■ 5.17
TPR-202ENST00000451586 PABPN1Q86U42 306 aaKnown RBP eCLIP47.27■■■■■ 5.16
TPR-202ENST00000451586 BICRAQ9NZM4 1560 aa47.15■■■■■ 5.14
TPR-202ENST00000451586 SHROOM4Q9ULL8 1493 aa46.56■■■■■ 5.04
TPR-202ENST00000451586 DNAJC5BQ9UF47 199 aa46.07■■■■■ 4.97
TPR-202ENST00000451586 EIF4G1Q04637 1599 aaKnown RBP45.86■■■■■ 4.93
TPR-202ENST00000451586 CC2D2AQ9P2K1 1620 aa45.61■■■■■ 4.89
TPR-202ENST00000451586 CECR2Q9BXF3 1484 aa45.58■■■■■ 4.89
TPR-202ENST00000451586 SMARCA4P51532 1647 aa45.29■■■■■ 4.84
TPR-202ENST00000451586 BAZ1AQ9NRL2 1556 aaPredicted RBP45.27■■■■■ 4.84
TPR-202ENST00000451586 MROH2BQ7Z745 1585 aa45.11■■■■■ 4.81
TPR-202ENST00000451586 ATAD2BQ9ULI0 1458 aa44.98■■■■■ 4.79
TPR-202ENST00000451586 SMARCA2P51531 1590 aa44.9■■■■■ 4.78
TPR-202ENST00000451586 NCAPD3P42695 1498 aa44.89■■■■■ 4.78
TPR-202ENST00000451586 PEG3Q9GZU2 1588 aa44.79■■■■■ 4.76
TPR-202ENST00000451586 RSF1Q96T23 1441 aaPredicted RBP44.72■■■■■ 4.75
TPR-202ENST00000451586 HMGXB3Q12766 1538 aa44.65■■■■■ 4.74
TPR-202ENST00000451586 WIZO95785 1651 aa44.64■■■■■ 4.74
TPR-202ENST00000451586 BAZ1BQ9UIG0 1483 aaKnown RBP44.62■■■■■ 4.73
TPR-202ENST00000451586 TOP2AP11388 1531 aaKnown RBP44.13■■■■■ 4.65
TPR-202ENST00000451586 SUPT5HO00267 1087 aaKnown RBP43.95■■■■■ 4.63
TPR-202ENST00000451586 NESP48681 1621 aa43.77■■■■■ 4.6
TPR-202ENST00000451586 CCDC88BA6NC98 1476 aa43.68■■■■■ 4.58
TPR-202ENST00000451586 CADPSQ9ULU8 1353 aa43.63■■■■■ 4.57
TPR-202ENST00000451586 LAMC3Q9Y6N6 1575 aa43.61■■■■■ 4.57
TPR-202ENST00000451586 ERCC6Q03468 1493 aa43.42■■■■■ 4.54
TPR-202ENST00000451586 CFTRP13569 1480 aa43.41■■■■■ 4.54
TPR-202ENST00000451586 PDS5BQ9NTI5 1447 aa43.35■■■■■ 4.53
TPR-202ENST00000451586 KIF21AQ7Z4S6 1674 aa43.2■■■■■ 4.51
TPR-202ENST00000451586 FANCD2Q9BXW9 1451 aa43.11■■■■■ 4.49
TPR-202ENST00000451586 PRDM2Q13029 1718 aa43.05■■■■■ 4.48
TPR-202ENST00000451586 CEP164Q9UPV0 1460 aa43■■■■■ 4.47
TPR-202ENST00000451586 THOC2Q8NI27 1593 aaKnown RBP42.95■■■■■ 4.47
TPR-202ENST00000451586 MRC2Q9UBG0 1479 aa42.87■■■■■ 4.45
TPR-202ENST00000451586 CUX2O14529 1486 aa42.79■■■■■ 4.44
TPR-202ENST00000451586 WDR62O43379 1518 aa42.71■■■■■ 4.43
TPR-202ENST00000451586 URB2Q14146 1524 aaKnown RBP42.66■■■■■ 4.42
TPR-202ENST00000451586 TOPBP1Q92547 1522 aa42.46■■■■■ 4.39
TPR-202ENST00000451586 ABCC8Q09428 1581 aa42.44■■■■■ 4.38
TPR-202ENST00000451586 DNMBPQ6XZF7 1577 aa42.42■■■■■ 4.38
TPR-202ENST00000451586 CUX1P39880 1505 aa42.29■■■■■ 4.36
TPR-202ENST00000451586 WRNQ14191 1432 aaPredicted RBP eCLIP42.14■■■■■ 4.34
TPR-202ENST00000451586 POLA1P09884 1462 aaPredicted RBP42.12■■■■■ 4.33
TPR-202ENST00000451586 IFT140Q96RY7 1462 aa42.09■■■■■ 4.33
TPR-202ENST00000451586 FGD5Q6ZNL6 1462 aa42.08■■■■■ 4.33
TPR-202ENST00000451586 SYNJ1O43426 1573 aa42.01■■■■■ 4.32
TPR-202ENST00000451586 SOGA1O94964 1423 aa42■■■■■ 4.31
TPR-202ENST00000451586 RAD54L2Q9Y4B4 1467 aa41.99■■■■■ 4.31
TPR-202ENST00000451586 TOP2BQ02880 1626 aa41.98■■■■■ 4.31
TPR-202ENST00000451586 TARBP1Q13395 1621 aaKnown RBP41.95■■■■■ 4.31
TPR-202ENST00000451586 BIVM-ERCC5R4GMW8 1640 aa41.95■■■■■ 4.31
TPR-202ENST00000451586 ZNF608Q9ULD9 1512 aaPredicted RBP41.92■■■■■ 4.3
TPR-202ENST00000451586 AQRO60306 1485 aaKnown RBP eCLIP41.75■■■■■ 4.27
TPR-202ENST00000451586 TDRD9Q8NDG6 1382 aaKnown RBP41.75■■■■■ 4.27
TPR-202ENST00000451586 EIF4G3O43432 1585 aaKnown RBP41.71■■■■■ 4.27
TPR-202ENST00000451586 ABCA10Q8WWZ4 1543 aa41.67■■■■■ 4.26
TPR-202ENST00000451586 WDR97A6NE52 1622 aa41.66■■■■■ 4.26
TPR-202ENST00000451586 GAPVD1Q14C86 1478 aa41.49■■■■■ 4.23
TPR-202ENST00000451586 TRIM41Q8WV44 630 aa41.46■■■■■ 4.23
TPR-202ENST00000451586 ABCA5Q8WWZ7 1642 aa41.45■■■■■ 4.23
TPR-202ENST00000451586 GRIN2BQ13224 1484 aa41.41■■■■■ 4.22
TPR-202ENST00000451586 PBRM1Q86U86 1689 aa41.34■■■■■ 4.21
TPR-202ENST00000451586 SNAPC4Q5SXM2 1469 aa41.33■■■■■ 4.21
TPR-202ENST00000451586 MAGI1Q96QZ7 1491 aaPredicted RBP41.24■■■■■ 4.19
TPR-202ENST00000451586 FBLN2P98095 1184 aa41.23■■■■■ 4.19
TPR-202ENST00000451586 KIF27Q86VH2 1401 aa41.23■■■■■ 4.19
TPR-202ENST00000451586 CHIC1Q5VXU3 224 aa41.2■■■■■ 4.19
TPR-202ENST00000451586 OSCARQ8IYS5 282 aa41.18■■■■■ 4.18
TPR-202ENST00000451586 DNAJC5Q9H3Z4 198 aa41.17■■■■■ 4.18
TPR-202ENST00000451586 ERICH3Q5RHP9 1530 aa41.15■■■■■ 4.18
TPR-202ENST00000451586 CHD1O14646 1710 aa41.14■■■■■ 4.18
TPR-202ENST00000451586 CHMP7Q8WUX9 453 aaPredicted RBP41.14■■■■■ 4.18
TPR-202ENST00000451586 SYNJ2O15056 1496 aa41.1■■■■■ 4.17
TPR-202ENST00000451586 IGF1RP08069 1367 aa41.07■■■■■ 4.16
TPR-202ENST00000451586 RUSC2Q8N2Y8 1516 aa41.04■■■■■ 4.16
TPR-202ENST00000451586 ADAMTS12P58397 1594 aa41.03■■■■■ 4.16
TPR-202ENST00000451586 FHAD1B1AJZ9 1412 aa41.01■■■■■ 4.15
TPR-202ENST00000451586 GRIN2AQ12879 1464 aa40.88■■■■■ 4.13
TPR-202ENST00000451586 CUL7Q14999 1698 aa40.83■■■■■ 4.13
TPR-202ENST00000451586 CARMIL1Q5VZK9 1371 aa40.82■■■■■ 4.12
TPR-202ENST00000451586 NUP160Q12769 1436 aa40.68■■■■■ 4.1
TPR-202ENST00000451586 CLASP1Q7Z460 1538 aa40.68■■■■■ 4.1
TPR-202ENST00000451586 CEP170Q5SW79 1584 aa40.67■■■■■ 4.1
TPR-202ENST00000451586 FAM9AQ8IZU1 332 aaPredicted RBP40.65■■■■■ 4.1
TPR-202ENST00000451586 CSRNP3Q8WYN3 585 aa40.64■■■■■ 4.1
TPR-202ENST00000451586 EEA1Q15075 1411 aa40.63■■■■■ 4.09
TPR-202ENST00000451586 RAPGEF2Q9Y4G8 1499 aa40.58■■■■■ 4.09
TPR-202ENST00000451586 PRXQ9BXM0 1461 aa40.51■■■■■ 4.08
TPR-202ENST00000451586 ARHGEF11O15085 1522 aa40.45■■■■■ 4.07
TPR-202ENST00000451586 RIMBP3CA6NJZ7 1639 aa40.42■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms