RNA–Protein interactions for RNA: ENST00000272748.8

LNPK-201, Transcript of lunapark, ER junction formation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNPK, Length 7,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNPK-201ENST00000272748 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
LNPK-201ENST00000272748 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
LNPK-201ENST00000272748 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
LNPK-201ENST00000272748 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
LNPK-201ENST00000272748 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
LNPK-201ENST00000272748 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
LNPK-201ENST00000272748 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
LNPK-201ENST00000272748 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
LNPK-201ENST00000272748 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
LNPK-201ENST00000272748 ABCC9O60706 1549 aa12.44□□□□□ -0.42
LNPK-201ENST00000272748 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
LNPK-201ENST00000272748 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
LNPK-201ENST00000272748 APLP2Q06481 763 aa12.27□□□□□ -0.45
LNPK-201ENST00000272748 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
LNPK-201ENST00000272748 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
LNPK-201ENST00000272748 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
LNPK-201ENST00000272748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
LNPK-201ENST00000272748 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
LNPK-201ENST00000272748 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
LNPK-201ENST00000272748 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
LNPK-201ENST00000272748 FBLN2P98095 1184 aa11.86□□□□□ -0.51
LNPK-201ENST00000272748 ITGAEP38570 1179 aa11.84□□□□□ -0.51
LNPK-201ENST00000272748 CHIC1Q5VXU3 224 aa11.8□□□□□ -0.52
LNPK-201ENST00000272748 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
LNPK-201ENST00000272748 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
LNPK-201ENST00000272748 P3H3Q8IVL6 736 aa11.62□□□□□ -0.55
LNPK-201ENST00000272748 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
LNPK-201ENST00000272748 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
LNPK-201ENST00000272748 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
LNPK-201ENST00000272748 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.58
LNPK-201ENST00000272748 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.59
LNPK-201ENST00000272748 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
LNPK-201ENST00000272748 TRIM26Q12899 539 aaPredicted RBP11.35□□□□□ -0.59
LNPK-201ENST00000272748 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
LNPK-201ENST00000272748 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
LNPK-201ENST00000272748 ZCCHC6Q5VYS8 1495 aaKnown RBP11.34□□□□□ -0.59
LNPK-201ENST00000272748 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
LNPK-201ENST00000272748 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
LNPK-201ENST00000272748 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
LNPK-201ENST00000272748 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
LNPK-201ENST00000272748 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
LNPK-201ENST00000272748 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
LNPK-201ENST00000272748 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.62
LNPK-201ENST00000272748 BCANQ96GW7 911 aa11.18□□□□□ -0.62
LNPK-201ENST00000272748 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
LNPK-201ENST00000272748 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
LNPK-201ENST00000272748 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
LNPK-201ENST00000272748 CECR2Q9BXF3 1484 aa11.13□□□□□ -0.63
LNPK-201ENST00000272748 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
LNPK-201ENST00000272748 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
LNPK-201ENST00000272748 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
LNPK-201ENST00000272748 CDK11AQ9UQ88 783 aaPredicted RBP11.1□□□□□ -0.63
LNPK-201ENST00000272748 HRCP23327 699 aa11.09□□□□□ -0.63
LNPK-201ENST00000272748 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
LNPK-201ENST00000272748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■□□□□ 9.7
LNPK-201ENST00000272748 CCDC180Q9P1Z9 1646 aa11.07□□□□□ -0.64
LNPK-201ENST00000272748 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
LNPK-201ENST00000272748 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
LNPK-201ENST00000272748 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.64
LNPK-201ENST00000272748 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
LNPK-201ENST00000272748 NACADO15069 1562 aa11.01□□□□□ -0.65
LNPK-201ENST00000272748 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
LNPK-201ENST00000272748 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
LNPK-201ENST00000272748 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
LNPK-201ENST00000272748 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
LNPK-201ENST00000272748 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
LNPK-201ENST00000272748 NEFLP07196 543 aa10.93□□□□□ -0.66
LNPK-201ENST00000272748 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
LNPK-201ENST00000272748 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
LNPK-201ENST00000272748 TDRD9Q8NDG6 1382 aaKnown RBP10.92□□□□□ -0.66
LNPK-201ENST00000272748 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
LNPK-201ENST00000272748 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
LNPK-201ENST00000272748 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
LNPK-201ENST00000272748 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
LNPK-201ENST00000272748 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.67
LNPK-201ENST00000272748 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
LNPK-201ENST00000272748 MLECQ14165 292 aa10.86□□□□□ -0.67
LNPK-201ENST00000272748 RGL3Q3MIN7 710 aa10.84□□□□□ -0.67
LNPK-201ENST00000272748 DIEXFQ68CQ4 756 aaKnown RBP10.84□□□□□ -0.67
LNPK-201ENST00000272748 HIRIP3Q9BW71 556 aaPredicted RBP10.84□□□□□ -0.67
LNPK-201ENST00000272748 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
LNPK-201ENST00000272748 CLIP1P30622 1438 aa10.82□□□□□ -0.68
LNPK-201ENST00000272748 CFDP1Q9UEE9 299 aaPredicted RBP10.81□□□□□ -0.68
LNPK-201ENST00000272748 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
LNPK-201ENST00000272748 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
LNPK-201ENST00000272748 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
LNPK-201ENST00000272748 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
LNPK-201ENST00000272748 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
LNPK-201ENST00000272748 CUX2O14529 1486 aa10.77□□□□□ -0.68
LNPK-201ENST00000272748 SOGA1O94964 1423 aa10.77□□□□□ -0.69
LNPK-201ENST00000272748 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
LNPK-201ENST00000272748 CARMIL1Q5VZK9 1371 aa10.75□□□□□ -0.69
LNPK-201ENST00000272748 C14orf37Q86TY3 774 aa10.74□□□□□ -0.69
LNPK-201ENST00000272748 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
LNPK-201ENST00000272748 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
LNPK-201ENST00000272748 CCDC88BA6NC98 1476 aa10.73□□□□□ -0.69
LNPK-201ENST00000272748 A0A0G2JS52 829 aa10.72□□□□□ -0.69
LNPK-201ENST00000272748 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
LNPK-201ENST00000272748 TONSLQ96HA7 1378 aa10.71□□□□□ -0.69
LNPK-201ENST00000272748 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms