RNA–Protein interactions for RNA: ENST00000613151.1

TPR-209, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5 BASIC

Gene TPR, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-209ENST00000613151 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
TPR-209ENST00000613151 CCDC180Q9P1Z9 1646 aa33.76■■■■□ 3
TPR-209ENST00000613151 ZCCHC6Q5VYS8 1495 aaKnown RBP32.81■■■□□ 2.84
TPR-209ENST00000613151 DCAF1Q9Y4B6 1507 aa32.21■■■□□ 2.75
TPR-209ENST00000613151 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
TPR-209ENST00000613151 SHROOM4Q9ULL8 1493 aa32.05■■■□□ 2.72
TPR-209ENST00000613151 MYO15BQ96JP2 1530 aa31.71■■■□□ 2.67
TPR-209ENST00000613151 ABCC9O60706 1549 aa31.7■■■□□ 2.67
TPR-209ENST00000613151 NACADO15069 1562 aa31.4■■■□□ 2.62
TPR-209ENST00000613151 SCRIBQ14160 1630 aa31.14■■■□□ 2.58
TPR-209ENST00000613151 RB1CC1Q8TDY2 1594 aa31.04■■■□□ 2.56
TPR-209ENST00000613151 SUPT5HO00267 1087 aaKnown RBP31.01■■■□□ 2.56
TPR-209ENST00000613151 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
TPR-209ENST00000613151 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
TPR-209ENST00000613151 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
TPR-209ENST00000613151 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
TPR-209ENST00000613151 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
TPR-209ENST00000613151 BAZ1AQ9NRL2 1556 aaPredicted RBP30.05■■■□□ 2.4
TPR-209ENST00000613151 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
TPR-209ENST00000613151 WIZO95785 1651 aa29.9■■■□□ 2.38
TPR-209ENST00000613151 CHIC1Q5VXU3 224 aa29.88■■■□□ 2.37
TPR-209ENST00000613151 SMARCA4P51532 1647 aa29.87■■■□□ 2.37
TPR-209ENST00000613151 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
TPR-209ENST00000613151 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.32
TPR-209ENST00000613151 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
TPR-209ENST00000613151 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
TPR-209ENST00000613151 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
TPR-209ENST00000613151 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
TPR-209ENST00000613151 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
TPR-209ENST00000613151 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
TPR-209ENST00000613151 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
TPR-209ENST00000613151 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
TPR-209ENST00000613151 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
TPR-209ENST00000613151 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
TPR-209ENST00000613151 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
TPR-209ENST00000613151 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
TPR-209ENST00000613151 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
TPR-209ENST00000613151 CFTRP13569 1480 aa28.48■■■□□ 2.15
TPR-209ENST00000613151 SYNJ1O43426 1573 aa28.44■■■□□ 2.14
TPR-209ENST00000613151 SOGA1O94964 1423 aa28.36■■■□□ 2.13
TPR-209ENST00000613151 EEA1Q15075 1411 aa28.31■■■□□ 2.12
TPR-209ENST00000613151 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
TPR-209ENST00000613151 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
TPR-209ENST00000613151 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
TPR-209ENST00000613151 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
TPR-209ENST00000613151 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
TPR-209ENST00000613151 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.1
TPR-209ENST00000613151 CSRNP3Q8WYN3 585 aa28.17■■■□□ 2.1
TPR-209ENST00000613151 CUX1P39880 1505 aa28.15■■■□□ 2.1
TPR-209ENST00000613151 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
TPR-209ENST00000613151 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
TPR-209ENST00000613151 NESP48681 1621 aa27.96■■■□□ 2.07
TPR-209ENST00000613151 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.06
TPR-209ENST00000613151 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
TPR-209ENST00000613151 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
TPR-209ENST00000613151 KIF21BO75037 1637 aa27.92■■■□□ 2.06
TPR-209ENST00000613151 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
TPR-209ENST00000613151 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.05
TPR-209ENST00000613151 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
TPR-209ENST00000613151 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
TPR-209ENST00000613151 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
TPR-209ENST00000613151 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
TPR-209ENST00000613151 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
TPR-209ENST00000613151 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
TPR-209ENST00000613151 PRXQ9BXM0 1461 aa27.74■■■□□ 2.03
TPR-209ENST00000613151 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
TPR-209ENST00000613151 HRCP23327 699 aa27.73■■■□□ 2.03
TPR-209ENST00000613151 TOPBP1Q92547 1522 aa27.71■■■□□ 2.03
TPR-209ENST00000613151 ERICH3Q5RHP9 1530 aa27.69■■■□□ 2.02
TPR-209ENST00000613151 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
TPR-209ENST00000613151 CUX2O14529 1486 aa27.67■■■□□ 2.02
TPR-209ENST00000613151 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.01
TPR-209ENST00000613151 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
TPR-209ENST00000613151 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
TPR-209ENST00000613151 IGF1RP08069 1367 aa27.58■■■□□ 2.01
TPR-209ENST00000613151 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
TPR-209ENST00000613151 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
TPR-209ENST00000613151 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
TPR-209ENST00000613151 CLIP1P30622 1438 aa27.53■■■□□ 2
TPR-209ENST00000613151 CARMIL1Q5VZK9 1371 aa27.42■■□□□ 1.98
TPR-209ENST00000613151 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
TPR-209ENST00000613151 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
TPR-209ENST00000613151 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
TPR-209ENST00000613151 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.97
TPR-209ENST00000613151 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
TPR-209ENST00000613151 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
TPR-209ENST00000613151 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
TPR-209ENST00000613151 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
TPR-209ENST00000613151 CUL7Q14999 1698 aa27.25■■□□□ 1.95
TPR-209ENST00000613151 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
TPR-209ENST00000613151 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
TPR-209ENST00000613151 WDR62O43379 1518 aa27.2■■□□□ 1.94
TPR-209ENST00000613151 ARHGAP35Q9NRY4 1499 aa27.17■■□□□ 1.94
TPR-209ENST00000613151 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
TPR-209ENST00000613151 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
TPR-209ENST00000613151 TTBK1Q5TCY1 1321 aaPredicted RBP27.06■■□□□ 1.92
TPR-209ENST00000613151 APLP2Q06481 763 aa27.04■■□□□ 1.92
TPR-209ENST00000613151 THOC2Q8NI27 1593 aaKnown RBP27.03■■□□□ 1.92
TPR-209ENST00000613151 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.921e-6■■■□□ 17.1
TPR-209ENST00000613151 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms