RNA–Protein interactions for RNA: ENST00000474980.1

PIGF-205, Transcript of phosphatidylinositol glycan anchor biosynthesis class F, humanhuman

TSL 2

Gene PIGF, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIGF-205ENST00000474980 NISCHQ9Y2I1 1504 aa47.22■■■■■ 5.15
PIGF-205ENST00000474980 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
PIGF-205ENST00000474980 ABCC9O60706 1549 aa41.95■■■■■ 4.31
PIGF-205ENST00000474980 RB1CC1Q8TDY2 1594 aa40.08■■■■■ 4.01
PIGF-205ENST00000474980 NACADO15069 1562 aa39.86■■■■□ 3.97
PIGF-205ENST00000474980 DCAF8L2P0C7V8 631 aa39.79■■■■□ 3.96
PIGF-205ENST00000474980 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
PIGF-205ENST00000474980 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
PIGF-205ENST00000474980 UNC13AQ9UPW8 1703 aa39.19■■■■□ 3.86
PIGF-205ENST00000474980 PABPN1Q86U42 306 aaKnown RBP eCLIP39.08■■■■□ 3.85
PIGF-205ENST00000474980 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
PIGF-205ENST00000474980 DNAJC5BQ9UF47 199 aa38.95■■■■□ 3.83
PIGF-205ENST00000474980 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
PIGF-205ENST00000474980 SCRIBQ14160 1630 aa38.57■■■■□ 3.77
PIGF-205ENST00000474980 SHROOM4Q9ULL8 1493 aa38.37■■■■□ 3.73
PIGF-205ENST00000474980 CC2D2AQ9P2K1 1620 aa37.9■■■■□ 3.66
PIGF-205ENST00000474980 EIF4G1Q04637 1599 aaKnown RBP37.89■■■■□ 3.66
PIGF-205ENST00000474980 CECR2Q9BXF3 1484 aa37.74■■■■□ 3.63
PIGF-205ENST00000474980 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
PIGF-205ENST00000474980 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
PIGF-205ENST00000474980 ATAD2BQ9ULI0 1458 aa36.71■■■■□ 3.47
PIGF-205ENST00000474980 SMARCA2P51531 1590 aa36.67■■■■□ 3.46
PIGF-205ENST00000474980 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
PIGF-205ENST00000474980 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
PIGF-205ENST00000474980 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
PIGF-205ENST00000474980 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
PIGF-205ENST00000474980 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
PIGF-205ENST00000474980 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
PIGF-205ENST00000474980 NESP48681 1621 aa36.11■■■■□ 3.37
PIGF-205ENST00000474980 WIZO95785 1651 aa36.01■■■■□ 3.36
PIGF-205ENST00000474980 CUX2O14529 1486 aa35.99■■■■□ 3.35
PIGF-205ENST00000474980 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
PIGF-205ENST00000474980 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
PIGF-205ENST00000474980 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
PIGF-205ENST00000474980 KIF21AQ7Z4S6 1674 aa35.71■■■■□ 3.31
PIGF-205ENST00000474980 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
PIGF-205ENST00000474980 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
PIGF-205ENST00000474980 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.29
PIGF-205ENST00000474980 DNAJC5Q9H3Z4 198 aa35.55■■■■□ 3.28
PIGF-205ENST00000474980 MRC2Q9UBG0 1479 aa35.38■■■■□ 3.25
PIGF-205ENST00000474980 CFTRP13569 1480 aa35.34■■■■□ 3.25
PIGF-205ENST00000474980 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
PIGF-205ENST00000474980 FANCD2Q9BXW9 1451 aa35.3■■■■□ 3.24
PIGF-205ENST00000474980 WDR62O43379 1518 aa35.27■■■■□ 3.24
PIGF-205ENST00000474980 CCDC88BA6NC98 1476 aa35.14■■■■□ 3.22
PIGF-205ENST00000474980 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
PIGF-205ENST00000474980 URB2Q14146 1524 aaKnown RBP34.97■■■■□ 3.19
PIGF-205ENST00000474980 TOPBP1Q92547 1522 aa34.67■■■■□ 3.14
PIGF-205ENST00000474980 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
PIGF-205ENST00000474980 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
PIGF-205ENST00000474980 DNMBPQ6XZF7 1577 aa34.58■■■■□ 3.13
PIGF-205ENST00000474980 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
PIGF-205ENST00000474980 ZNF608Q9ULD9 1512 aaPredicted RBP34.49■■■■□ 3.11
PIGF-205ENST00000474980 OSCARQ8IYS5 282 aa34.4■■■■□ 3.1
PIGF-205ENST00000474980 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
PIGF-205ENST00000474980 POLA1P09884 1462 aaPredicted RBP34.33■■■■□ 3.09
PIGF-205ENST00000474980 TARBP1Q13395 1621 aaKnown RBP34.32■■■■□ 3.08
PIGF-205ENST00000474980 TRIM41Q8WV44 630 aa34.23■■■■□ 3.07
PIGF-205ENST00000474980 AQRO60306 1485 aaKnown RBP eCLIP34.22■■■■□ 3.07
PIGF-205ENST00000474980 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
PIGF-205ENST00000474980 CUX1P39880 1505 aa34.19■■■■□ 3.06
PIGF-205ENST00000474980 SOGA1O94964 1423 aa34.18■■■■□ 3.06
PIGF-205ENST00000474980 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
PIGF-205ENST00000474980 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
PIGF-205ENST00000474980 CHD1O14646 1710 aa34.06■■■■□ 3.04
PIGF-205ENST00000474980 WDR97A6NE52 1622 aa34.01■■■■□ 3.04
PIGF-205ENST00000474980 FBLN2P98095 1184 aa33.99■■■■□ 3.03
PIGF-205ENST00000474980 RIMBP3CA6NJZ7 1639 aa33.95■■■■□ 3.03
PIGF-205ENST00000474980 RIMBP3BA6NNM3 1639 aa33.95■■■■□ 3.03
PIGF-205ENST00000474980 RIMBP3Q9UFD9 1639 aa33.95■■■■□ 3.03
PIGF-205ENST00000474980 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
PIGF-205ENST00000474980 ARHGEF11O15085 1522 aa33.87■■■■□ 3.01
PIGF-205ENST00000474980 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
PIGF-205ENST00000474980 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3.01
PIGF-205ENST00000474980 PBRM1Q86U86 1689 aa33.8■■■■□ 3
PIGF-205ENST00000474980 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
PIGF-205ENST00000474980 GAPVD1Q14C86 1478 aa33.79■■■■□ 3
PIGF-205ENST00000474980 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
PIGF-205ENST00000474980 WRNQ14191 1432 aaPredicted RBP eCLIP33.76■■■□□ 2.99
PIGF-205ENST00000474980 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
PIGF-205ENST00000474980 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
PIGF-205ENST00000474980 ABCA5Q8WWZ7 1642 aa33.72■■■□□ 2.99
PIGF-205ENST00000474980 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
PIGF-205ENST00000474980 SYNJ2O15056 1496 aa33.7■■■□□ 2.99
PIGF-205ENST00000474980 CLASP1Q7Z460 1538 aa33.61■■■□□ 2.97
PIGF-205ENST00000474980 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
PIGF-205ENST00000474980 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
PIGF-205ENST00000474980 ADAMTS12P58397 1594 aa33.46■■■□□ 2.95
PIGF-205ENST00000474980 GRIN2AQ12879 1464 aa33.42■■■□□ 2.94
PIGF-205ENST00000474980 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
PIGF-205ENST00000474980 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
PIGF-205ENST00000474980 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
PIGF-205ENST00000474980 NUP160Q12769 1436 aa33.27■■■□□ 2.92
PIGF-205ENST00000474980 TRHP20396 242 aaPredicted RBP33.16■■■□□ 2.9
PIGF-205ENST00000474980 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
PIGF-205ENST00000474980 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
PIGF-205ENST00000474980 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
PIGF-205ENST00000474980 CUL7Q14999 1698 aa33.01■■■□□ 2.87
PIGF-205ENST00000474980 IGF1RP08069 1367 aa33■■■□□ 2.87
PIGF-205ENST00000474980 RUSC2Q8N2Y8 1516 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms