RNA–Protein interactions for RNA: ENST00000557905.5

PRC1-213, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 4

Gene PRC1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-213ENST00000557905 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
PRC1-213ENST00000557905 CCDC180Q9P1Z9 1646 aa38.13■■■■□ 3.69
PRC1-213ENST00000557905 ABCC9O60706 1549 aa37.47■■■■□ 3.59
PRC1-213ENST00000557905 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
PRC1-213ENST00000557905 NACADO15069 1562 aa35.86■■■■□ 3.33
PRC1-213ENST00000557905 DCAF8L2P0C7V8 631 aa35.58■■■■□ 3.29
PRC1-213ENST00000557905 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
PRC1-213ENST00000557905 ZCCHC6Q5VYS8 1495 aaKnown RBP35.45■■■■□ 3.27
PRC1-213ENST00000557905 UNC13AQ9UPW8 1703 aa35.28■■■■□ 3.24
PRC1-213ENST00000557905 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
PRC1-213ENST00000557905 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
PRC1-213ENST00000557905 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
PRC1-213ENST00000557905 SCRIBQ14160 1630 aa34.69■■■■□ 3.14
PRC1-213ENST00000557905 DNAJC5BQ9UF47 199 aa34.62■■■■□ 3.13
PRC1-213ENST00000557905 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
PRC1-213ENST00000557905 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
PRC1-213ENST00000557905 CC2D2AQ9P2K1 1620 aa33.95■■■■□ 3.03
PRC1-213ENST00000557905 CECR2Q9BXF3 1484 aa33.71■■■□□ 2.99
PRC1-213ENST00000557905 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
PRC1-213ENST00000557905 BAZ1AQ9NRL2 1556 aaPredicted RBP33.07■■■□□ 2.88
PRC1-213ENST00000557905 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
PRC1-213ENST00000557905 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
PRC1-213ENST00000557905 SMARCA2P51531 1590 aa33■■■□□ 2.87
PRC1-213ENST00000557905 HMGXB3Q12766 1538 aa32.91■■■□□ 2.86
PRC1-213ENST00000557905 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
PRC1-213ENST00000557905 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
PRC1-213ENST00000557905 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
PRC1-213ENST00000557905 WIZO95785 1651 aa32.5■■■□□ 2.79
PRC1-213ENST00000557905 NESP48681 1621 aa32.34■■■□□ 2.77
PRC1-213ENST00000557905 ERCC6Q03468 1493 aa32.33■■■□□ 2.77
PRC1-213ENST00000557905 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
PRC1-213ENST00000557905 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
PRC1-213ENST00000557905 CUX2O14529 1486 aa32.14■■■□□ 2.74
PRC1-213ENST00000557905 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
PRC1-213ENST00000557905 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
PRC1-213ENST00000557905 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
PRC1-213ENST00000557905 THOC2Q8NI27 1593 aaKnown RBP32.01■■■□□ 2.71
PRC1-213ENST00000557905 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
PRC1-213ENST00000557905 CFTRP13569 1480 aa31.81■■■□□ 2.68
PRC1-213ENST00000557905 PRDM2Q13029 1718 aa31.73■■■□□ 2.67
PRC1-213ENST00000557905 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
PRC1-213ENST00000557905 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
PRC1-213ENST00000557905 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
PRC1-213ENST00000557905 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
PRC1-213ENST00000557905 WDR62O43379 1518 aa31.66■■■□□ 2.66
PRC1-213ENST00000557905 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.63
PRC1-213ENST00000557905 URB2Q14146 1524 aaKnown RBP31.41■■■□□ 2.62
PRC1-213ENST00000557905 TOPBP1Q92547 1522 aa31.18■■■□□ 2.58
PRC1-213ENST00000557905 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
PRC1-213ENST00000557905 ABCC8Q09428 1581 aa31.16■■■□□ 2.58
PRC1-213ENST00000557905 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
PRC1-213ENST00000557905 IFT140Q96RY7 1462 aa31.04■■■□□ 2.56
PRC1-213ENST00000557905 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
PRC1-213ENST00000557905 TARBP1Q13395 1621 aaKnown RBP30.9■■■□□ 2.54
PRC1-213ENST00000557905 POLA1P09884 1462 aaPredicted RBP30.88■■■□□ 2.53
PRC1-213ENST00000557905 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
PRC1-213ENST00000557905 CUX1P39880 1505 aa30.83■■■□□ 2.53
PRC1-213ENST00000557905 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
PRC1-213ENST00000557905 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
PRC1-213ENST00000557905 SOGA1O94964 1423 aa30.7■■■□□ 2.5
PRC1-213ENST00000557905 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.58e-7■■■■■ 59.6
PRC1-213ENST00000557905 WDR97A6NE52 1622 aa30.67■■■□□ 2.5
PRC1-213ENST00000557905 OSCARQ8IYS5 282 aa30.67■■■□□ 2.5
PRC1-213ENST00000557905 CHD1O14646 1710 aa30.58■■■□□ 2.49
PRC1-213ENST00000557905 TDRD9Q8NDG6 1382 aaKnown RBP30.55■■■□□ 2.48
PRC1-213ENST00000557905 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
PRC1-213ENST00000557905 TOP2BQ02880 1626 aa30.5■■■□□ 2.47
PRC1-213ENST00000557905 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
PRC1-213ENST00000557905 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
PRC1-213ENST00000557905 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
PRC1-213ENST00000557905 PBRM1Q86U86 1689 aa30.45■■■□□ 2.46
PRC1-213ENST00000557905 SNAPC4Q5SXM2 1469 aa30.43■■■□□ 2.46
PRC1-213ENST00000557905 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
PRC1-213ENST00000557905 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
PRC1-213ENST00000557905 MAGI1Q96QZ7 1491 aaPredicted RBP30.39■■■□□ 2.46
PRC1-213ENST00000557905 GAPVD1Q14C86 1478 aa30.38■■■□□ 2.45
PRC1-213ENST00000557905 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
PRC1-213ENST00000557905 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
PRC1-213ENST00000557905 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
PRC1-213ENST00000557905 FBLN2P98095 1184 aa30.32■■■□□ 2.44
PRC1-213ENST00000557905 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
PRC1-213ENST00000557905 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
PRC1-213ENST00000557905 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
PRC1-213ENST00000557905 CHMP7Q8WUX9 453 aaPredicted RBP30.2■■■□□ 2.43
PRC1-213ENST00000557905 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
PRC1-213ENST00000557905 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
PRC1-213ENST00000557905 ERICH3Q5RHP9 1530 aa30.11■■■□□ 2.41
PRC1-213ENST00000557905 GRIN2AQ12879 1464 aa30.03■■■□□ 2.4
PRC1-213ENST00000557905 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
PRC1-213ENST00000557905 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
PRC1-213ENST00000557905 NUP160Q12769 1436 aa29.92■■■□□ 2.38
PRC1-213ENST00000557905 CEP170Q5SW79 1584 aa29.92■■■□□ 2.38
PRC1-213ENST00000557905 CYB5RLQ6IPT4 315 aa29.89■■■□□ 2.38
PRC1-213ENST00000557905 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
PRC1-213ENST00000557905 CUL7Q14999 1698 aa29.81■■■□□ 2.36
PRC1-213ENST00000557905 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
PRC1-213ENST00000557905 IGF1RP08069 1367 aa29.75■■■□□ 2.35
PRC1-213ENST00000557905 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
PRC1-213ENST00000557905 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
PRC1-213ENST00000557905 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms