RNA–Protein interactions for RNA: ENST00000412717.1

PIGF-203, Transcript of phosphatidylinositol glycan anchor biosynthesis class F, humanhuman

TSL 3

Gene PIGF, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIGF-203ENST00000412717 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
PIGF-203ENST00000412717 ABCC9O60706 1549 aa27.12■■□□□ 1.93
PIGF-203ENST00000412717 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
PIGF-203ENST00000412717 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
PIGF-203ENST00000412717 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
PIGF-203ENST00000412717 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
PIGF-203ENST00000412717 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
PIGF-203ENST00000412717 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
PIGF-203ENST00000412717 NACADO15069 1562 aa25.12■■□□□ 1.61
PIGF-203ENST00000412717 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
PIGF-203ENST00000412717 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
PIGF-203ENST00000412717 BICRAQ9NZM4 1560 aa24.81■■□□□ 1.56
PIGF-203ENST00000412717 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
PIGF-203ENST00000412717 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
PIGF-203ENST00000412717 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
PIGF-203ENST00000412717 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
PIGF-203ENST00000412717 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
PIGF-203ENST00000412717 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
PIGF-203ENST00000412717 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
PIGF-203ENST00000412717 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
PIGF-203ENST00000412717 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
PIGF-203ENST00000412717 CUX2O14529 1486 aa23.54■■□□□ 1.36
PIGF-203ENST00000412717 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
PIGF-203ENST00000412717 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
PIGF-203ENST00000412717 NESP48681 1621 aa23.15■■□□□ 1.3
PIGF-203ENST00000412717 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
PIGF-203ENST00000412717 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
PIGF-203ENST00000412717 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
PIGF-203ENST00000412717 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
PIGF-203ENST00000412717 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
PIGF-203ENST00000412717 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
PIGF-203ENST00000412717 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
PIGF-203ENST00000412717 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
PIGF-203ENST00000412717 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
PIGF-203ENST00000412717 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
PIGF-203ENST00000412717 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
PIGF-203ENST00000412717 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
PIGF-203ENST00000412717 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
PIGF-203ENST00000412717 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
PIGF-203ENST00000412717 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
PIGF-203ENST00000412717 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
PIGF-203ENST00000412717 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
PIGF-203ENST00000412717 WDR62O43379 1518 aa22.49■■□□□ 1.19
PIGF-203ENST00000412717 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
PIGF-203ENST00000412717 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
PIGF-203ENST00000412717 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
PIGF-203ENST00000412717 WIZO95785 1651 aa22.23■■□□□ 1.15
PIGF-203ENST00000412717 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
PIGF-203ENST00000412717 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
PIGF-203ENST00000412717 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
PIGF-203ENST00000412717 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
PIGF-203ENST00000412717 CFTRP13569 1480 aa22.14■■□□□ 1.13
PIGF-203ENST00000412717 ARHGEF11O15085 1522 aa22.05■■□□□ 1.12
PIGF-203ENST00000412717 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
PIGF-203ENST00000412717 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
PIGF-203ENST00000412717 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
PIGF-203ENST00000412717 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
PIGF-203ENST00000412717 RSF1Q96T23 1441 aaPredicted RBP21.86■■□□□ 1.09
PIGF-203ENST00000412717 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
PIGF-203ENST00000412717 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
PIGF-203ENST00000412717 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
PIGF-203ENST00000412717 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
PIGF-203ENST00000412717 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
PIGF-203ENST00000412717 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■□□□□ 9
PIGF-203ENST00000412717 CHD1O14646 1710 aa21.72■■□□□ 1.07
PIGF-203ENST00000412717 FBLN2P98095 1184 aa21.7■■□□□ 1.06
PIGF-203ENST00000412717 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
PIGF-203ENST00000412717 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
PIGF-203ENST00000412717 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
PIGF-203ENST00000412717 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
PIGF-203ENST00000412717 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.03
PIGF-203ENST00000412717 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
PIGF-203ENST00000412717 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
PIGF-203ENST00000412717 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
PIGF-203ENST00000412717 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
PIGF-203ENST00000412717 SOGA1O94964 1423 aa21.43■■□□□ 1.02
PIGF-203ENST00000412717 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
PIGF-203ENST00000412717 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
PIGF-203ENST00000412717 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
PIGF-203ENST00000412717 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
PIGF-203ENST00000412717 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
PIGF-203ENST00000412717 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
PIGF-203ENST00000412717 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
PIGF-203ENST00000412717 FOXD1Q16676 465 aa21.26■□□□□ 0.99
PIGF-203ENST00000412717 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
PIGF-203ENST00000412717 CUX1P39880 1505 aa21.21■□□□□ 0.99
PIGF-203ENST00000412717 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
PIGF-203ENST00000412717 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
PIGF-203ENST00000412717 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
PIGF-203ENST00000412717 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
PIGF-203ENST00000412717 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PIGF-203ENST00000412717 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
PIGF-203ENST00000412717 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
PIGF-203ENST00000412717 KIF13AQ9H1H9 1805 aa20.98■□□□□ 0.95
PIGF-203ENST00000412717 NUP160Q12769 1436 aa20.97■□□□□ 0.95
PIGF-203ENST00000412717 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
PIGF-203ENST00000412717 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
PIGF-203ENST00000412717 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
PIGF-203ENST00000412717 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
PIGF-203ENST00000412717 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms