RNA–Protein interactions for RNA: ENST00000555791.5

PRC1-208, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 4

Gene PRC1, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-208ENST00000555791 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
PRC1-208ENST00000555791 ABCC9O60706 1549 aa29.76■■■□□ 2.36
PRC1-208ENST00000555791 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
PRC1-208ENST00000555791 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
PRC1-208ENST00000555791 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
PRC1-208ENST00000555791 NACADO15069 1562 aa27.98■■■□□ 2.07
PRC1-208ENST00000555791 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
PRC1-208ENST00000555791 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
PRC1-208ENST00000555791 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
PRC1-208ENST00000555791 UNC13AQ9UPW8 1703 aa27.52■■■□□ 2
PRC1-208ENST00000555791 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
PRC1-208ENST00000555791 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
PRC1-208ENST00000555791 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
PRC1-208ENST00000555791 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
PRC1-208ENST00000555791 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
PRC1-208ENST00000555791 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
PRC1-208ENST00000555791 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
PRC1-208ENST00000555791 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
PRC1-208ENST00000555791 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
PRC1-208ENST00000555791 CUX2O14529 1486 aa25.9■■□□□ 1.74
PRC1-208ENST00000555791 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
PRC1-208ENST00000555791 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
PRC1-208ENST00000555791 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
PRC1-208ENST00000555791 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
PRC1-208ENST00000555791 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
PRC1-208ENST00000555791 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
PRC1-208ENST00000555791 NESP48681 1621 aa25.47■■□□□ 1.67
PRC1-208ENST00000555791 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
PRC1-208ENST00000555791 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
PRC1-208ENST00000555791 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
PRC1-208ENST00000555791 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
PRC1-208ENST00000555791 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
PRC1-208ENST00000555791 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
PRC1-208ENST00000555791 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
PRC1-208ENST00000555791 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
PRC1-208ENST00000555791 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
PRC1-208ENST00000555791 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
PRC1-208ENST00000555791 WDR62O43379 1518 aa24.91■■□□□ 1.58
PRC1-208ENST00000555791 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
PRC1-208ENST00000555791 WIZO95785 1651 aa24.78■■□□□ 1.56
PRC1-208ENST00000555791 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
PRC1-208ENST00000555791 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
PRC1-208ENST00000555791 CFTRP13569 1480 aa24.67■■□□□ 1.54
PRC1-208ENST00000555791 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
PRC1-208ENST00000555791 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
PRC1-208ENST00000555791 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
PRC1-208ENST00000555791 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
PRC1-208ENST00000555791 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
PRC1-208ENST00000555791 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
PRC1-208ENST00000555791 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
PRC1-208ENST00000555791 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
PRC1-208ENST00000555791 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
PRC1-208ENST00000555791 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
PRC1-208ENST00000555791 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
PRC1-208ENST00000555791 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
PRC1-208ENST00000555791 TOPBP1Q92547 1522 aa24.2■■□□□ 1.47
PRC1-208ENST00000555791 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
PRC1-208ENST00000555791 EIF4G3O43432 1585 aaKnown RBP24.11■■□□□ 1.45
PRC1-208ENST00000555791 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
PRC1-208ENST00000555791 CYB5RLQ6IPT4 315 aa24.03■■□□□ 1.44
PRC1-208ENST00000555791 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
PRC1-208ENST00000555791 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.431e-6■■■■■ 68
PRC1-208ENST00000555791 CHD1O14646 1710 aa23.96■■□□□ 1.43
PRC1-208ENST00000555791 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
PRC1-208ENST00000555791 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
PRC1-208ENST00000555791 FBLN2P98095 1184 aa23.88■■□□□ 1.41
PRC1-208ENST00000555791 TRHP20396 242 aaPredicted RBP23.85■■□□□ 1.41
PRC1-208ENST00000555791 SOGA1O94964 1423 aa23.83■■□□□ 1.4
PRC1-208ENST00000555791 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
PRC1-208ENST00000555791 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
PRC1-208ENST00000555791 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
PRC1-208ENST00000555791 CLASP1Q7Z460 1538 aa23.76■■□□□ 1.39
PRC1-208ENST00000555791 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
PRC1-208ENST00000555791 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
PRC1-208ENST00000555791 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
PRC1-208ENST00000555791 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
PRC1-208ENST00000555791 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
PRC1-208ENST00000555791 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
PRC1-208ENST00000555791 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
PRC1-208ENST00000555791 CUX1P39880 1505 aa23.64■■□□□ 1.37
PRC1-208ENST00000555791 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
PRC1-208ENST00000555791 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
PRC1-208ENST00000555791 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
PRC1-208ENST00000555791 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
PRC1-208ENST00000555791 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
PRC1-208ENST00000555791 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
PRC1-208ENST00000555791 NUP160Q12769 1436 aa23.32■■□□□ 1.32
PRC1-208ENST00000555791 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
PRC1-208ENST00000555791 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
PRC1-208ENST00000555791 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
PRC1-208ENST00000555791 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
PRC1-208ENST00000555791 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
PRC1-208ENST00000555791 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
PRC1-208ENST00000555791 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
PRC1-208ENST00000555791 TOP2BQ02880 1626 aa23.18■■□□□ 1.3
PRC1-208ENST00000555791 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
PRC1-208ENST00000555791 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
PRC1-208ENST00000555791 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.29
PRC1-208ENST00000555791 KIF13AQ9H1H9 1805 aa23.07■■□□□ 1.28
PRC1-208ENST00000555791 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms