RNA–Protein interactions for RNA: ENST00000556129.1

PRC1-209, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-209ENST00000556129 NISCHQ9Y2I1 1504 aa45.33■■■■■ 4.85
PRC1-209ENST00000556129 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
PRC1-209ENST00000556129 ABCC9O60706 1549 aa39.13■■■■□ 3.85
PRC1-209ENST00000556129 DCAF8L2P0C7V8 631 aa37.87■■■■□ 3.65
PRC1-209ENST00000556129 ZCCHC6Q5VYS8 1495 aaKnown RBP37.81■■■■□ 3.64
PRC1-209ENST00000556129 NACADO15069 1562 aa37.72■■■■□ 3.63
PRC1-209ENST00000556129 RB1CC1Q8TDY2 1594 aa37.72■■■■□ 3.63
PRC1-209ENST00000556129 MYO15BQ96JP2 1530 aa37.57■■■■□ 3.61
PRC1-209ENST00000556129 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.59
PRC1-209ENST00000556129 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
PRC1-209ENST00000556129 SCRIBQ14160 1630 aa36.7■■■■□ 3.47
PRC1-209ENST00000556129 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
PRC1-209ENST00000556129 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
PRC1-209ENST00000556129 SHROOM4Q9ULL8 1493 aa36.2■■■■□ 3.39
PRC1-209ENST00000556129 DNAJC5BQ9UF47 199 aa35.67■■■■□ 3.3
PRC1-209ENST00000556129 EIF4G1Q04637 1599 aaKnown RBP35.57■■■■□ 3.28
PRC1-209ENST00000556129 CC2D2AQ9P2K1 1620 aa35.35■■■■□ 3.25
PRC1-209ENST00000556129 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
PRC1-209ENST00000556129 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
PRC1-209ENST00000556129 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
PRC1-209ENST00000556129 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
PRC1-209ENST00000556129 ATAD2BQ9ULI0 1458 aa34.88■■■■□ 3.17
PRC1-209ENST00000556129 SMARCA2P51531 1590 aa34.85■■■■□ 3.17
PRC1-209ENST00000556129 NCAPD3P42695 1498 aa34.83■■■■□ 3.17
PRC1-209ENST00000556129 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
PRC1-209ENST00000556129 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
PRC1-209ENST00000556129 RSF1Q96T23 1441 aaPredicted RBP34.64■■■■□ 3.14
PRC1-209ENST00000556129 BAZ1BQ9UIG0 1483 aaKnown RBP34.63■■■■□ 3.13
PRC1-209ENST00000556129 WIZO95785 1651 aa34.54■■■■□ 3.12
PRC1-209ENST00000556129 TOP2AP11388 1531 aaKnown RBP34.22■■■■□ 3.07
PRC1-209ENST00000556129 SUPT5HO00267 1087 aaKnown RBP34.02■■■■□ 3.04
PRC1-209ENST00000556129 NESP48681 1621 aa33.9■■■■□ 3.02
PRC1-209ENST00000556129 LAMC3Q9Y6N6 1575 aa33.85■■■■□ 3.01
PRC1-209ENST00000556129 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
PRC1-209ENST00000556129 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
PRC1-209ENST00000556129 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
PRC1-209ENST00000556129 CFTRP13569 1480 aa33.68■■■□□ 2.98
PRC1-209ENST00000556129 PDS5BQ9NTI5 1447 aa33.66■■■□□ 2.98
PRC1-209ENST00000556129 FANCD2Q9BXW9 1451 aa33.45■■■□□ 2.95
PRC1-209ENST00000556129 KIF21AQ7Z4S6 1674 aa33.45■■■□□ 2.94
PRC1-209ENST00000556129 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
PRC1-209ENST00000556129 PRDM2Q13029 1718 aa33.32■■■□□ 2.92
PRC1-209ENST00000556129 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
PRC1-209ENST00000556129 MRC2Q9UBG0 1479 aa33.28■■■□□ 2.92
PRC1-209ENST00000556129 CUX2O14529 1486 aa33.25■■■□□ 2.91
PRC1-209ENST00000556129 WDR62O43379 1518 aa33.13■■■□□ 2.89
PRC1-209ENST00000556129 URB2Q14146 1524 aaKnown RBP33.07■■■□□ 2.89
PRC1-209ENST00000556129 ABCC8Q09428 1581 aa32.96■■■□□ 2.87
PRC1-209ENST00000556129 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
PRC1-209ENST00000556129 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
PRC1-209ENST00000556129 CUX1P39880 1505 aa32.76■■■□□ 2.83
PRC1-209ENST00000556129 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
PRC1-209ENST00000556129 IFT140Q96RY7 1462 aa32.68■■■□□ 2.82
PRC1-209ENST00000556129 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
PRC1-209ENST00000556129 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
PRC1-209ENST00000556129 SOGA1O94964 1423 aa32.57■■■□□ 2.8
PRC1-209ENST00000556129 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
PRC1-209ENST00000556129 TOP2BQ02880 1626 aa32.53■■■□□ 2.8
PRC1-209ENST00000556129 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
PRC1-209ENST00000556129 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.8
PRC1-209ENST00000556129 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.79
PRC1-209ENST00000556129 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
PRC1-209ENST00000556129 EIF4G3O43432 1585 aaKnown RBP32.36■■■□□ 2.77
PRC1-209ENST00000556129 AQRO60306 1485 aaKnown RBP eCLIP32.35■■■□□ 2.773e-6■■■□□ 18.6
PRC1-209ENST00000556129 TDRD9Q8NDG6 1382 aaKnown RBP32.35■■■□□ 2.77
PRC1-209ENST00000556129 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
PRC1-209ENST00000556129 WDR97A6NE52 1622 aa32.28■■■□□ 2.76
PRC1-209ENST00000556129 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
PRC1-209ENST00000556129 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
PRC1-209ENST00000556129 ABCA5Q8WWZ7 1642 aa32.13■■■□□ 2.73
PRC1-209ENST00000556129 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
PRC1-209ENST00000556129 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
PRC1-209ENST00000556129 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
PRC1-209ENST00000556129 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
PRC1-209ENST00000556129 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
PRC1-209ENST00000556129 FBLN2P98095 1184 aa31.98■■■□□ 2.71
PRC1-209ENST00000556129 OSCARQ8IYS5 282 aa31.96■■■□□ 2.71
PRC1-209ENST00000556129 DNAJC5Q9H3Z4 198 aa31.96■■■□□ 2.71
PRC1-209ENST00000556129 ERICH3Q5RHP9 1530 aa31.93■■■□□ 2.7
PRC1-209ENST00000556129 CHMP7Q8WUX9 453 aaPredicted RBP31.92■■■□□ 2.7
PRC1-209ENST00000556129 SYNJ2O15056 1496 aa31.91■■■□□ 2.7
PRC1-209ENST00000556129 CHIC1Q5VXU3 224 aa31.86■■■□□ 2.69
PRC1-209ENST00000556129 CHD1O14646 1710 aa31.85■■■□□ 2.69
PRC1-209ENST00000556129 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
PRC1-209ENST00000556129 ADAMTS12P58397 1594 aa31.82■■■□□ 2.68
PRC1-209ENST00000556129 IGF1RP08069 1367 aa31.81■■■□□ 2.68
PRC1-209ENST00000556129 RUSC2Q8N2Y8 1516 aa31.73■■■□□ 2.67
PRC1-209ENST00000556129 GRIN2AQ12879 1464 aa31.72■■■□□ 2.67
PRC1-209ENST00000556129 CUL7Q14999 1698 aa31.67■■■□□ 2.66
PRC1-209ENST00000556129 CARMIL1Q5VZK9 1371 aa31.64■■■□□ 2.66
PRC1-209ENST00000556129 NUP160Q12769 1436 aa31.57■■■□□ 2.64
PRC1-209ENST00000556129 CLASP1Q7Z460 1538 aa31.56■■■□□ 2.64
PRC1-209ENST00000556129 EEA1Q15075 1411 aa31.53■■■□□ 2.64
PRC1-209ENST00000556129 CEP170Q5SW79 1584 aa31.52■■■□□ 2.64
PRC1-209ENST00000556129 CSRNP3Q8WYN3 585 aa31.48■■■□□ 2.63
PRC1-209ENST00000556129 RAPGEF2Q9Y4G8 1499 aa31.47■■■□□ 2.63
PRC1-209ENST00000556129 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.63
PRC1-209ENST00000556129 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
PRC1-209ENST00000556129 ARHGEF11O15085 1522 aa31.39■■■□□ 2.62
PRC1-209ENST00000556129 RIMBP3CA6NJZ7 1639 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms