Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.234e-6■■■□□ 17.5
AARSP49588 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.184e-6■■■□□ 17.5
AARSP49588 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.164e-6■■■□□ 17.5
AARSP49588 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.074e-6■■■□□ 17.5
AARSP49588 RPL3-207ENST00000459859 447 ntTSL 321.5■■□□□ 1.038e-10■■■□□ 17.5
AARSP49588 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.32■■□□□ 14e-6■■■□□ 17.5
AARSP49588 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.1■□□□□ 0.975e-11■■■□□ 17.5
AARSP49588 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.921e-8■■■□□ 17.5
AARSP49588 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.69■□□□□ 0.94e-6■■■□□ 17.5
AARSP49588 RPL3-218ENST00000498462 669 ntTSL 320.29■□□□□ 0.848e-10■■■□□ 17.5
AARSP49588 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.11■□□□□ 0.814e-6■■■□□ 17.5
AARSP49588 SREBF1-206ENST00000423161 1058 ntTSL 320.09■□□□□ 0.814e-6■■■□□ 17.5
AARSP49588 RNF126-204ENST00000590885 1436 ntTSL 520.01■□□□□ 0.794e-6■■■□□ 17.5
AARSP49588 TNIP1-207ENST00000520695 658 ntTSL 419.96■□□□□ 0.794e-6■■■□□ 17.5
AARSP49588 TNIP1-216ENST00000522926 464 ntTSL 319.96■□□□□ 0.794e-6■■■□□ 17.5
AARSP49588 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.93■□□□□ 0.784e-6■■■□□ 17.5
AARSP49588 RBM38-202ENST00000344785 2193 ntTSL 519.89■□□□□ 0.774e-6■■■□□ 17.5
AARSP49588 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.75■□□□□ 0.754e-6■■■□□ 17.5
AARSP49588 AP1G1-215ENST00000568327 1724 ntTSL 519.73■□□□□ 0.754e-6■■■□□ 17.5
AARSP49588 HYOU1-215ENST00000543287 2464 ntTSL 219.71■□□□□ 0.754e-6■■■□□ 17.5
AARSP49588 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.738e-10■■■□□ 17.5
AARSP49588 RPL3-203ENST00000402527 1205 ntTSL 519.59■□□□□ 0.738e-10■■■□□ 17.5
AARSP49588 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.714e-6■■■□□ 17.5
AARSP49588 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.74e-6■■■□□ 17.5
AARSP49588 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.674e-6■■■□□ 17.5
AARSP49588 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.03■□□□□ 0.644e-6■■■□□ 17.5
AARSP49588 PRMT1-216ENST00000530361 866 ntTSL 318.9■□□□□ 0.624e-6■■■□□ 17.5
AARSP49588 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.72■□□□□ 0.594e-6■■■□□ 17.5
AARSP49588 RPL3-208ENST00000460589 630 ntTSL 218.59■□□□□ 0.578e-10■■■□□ 17.5
AARSP49588 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.561e-8■■■□□ 17.5
AARSP49588 SREBF1-203ENST00000395751 4653 ntTSL 218.36■□□□□ 0.534e-6■■■□□ 17.5
AARSP49588 SF3A2-203ENST00000587637 501 ntTSL 218.32■□□□□ 0.522e-7■■■□□ 17.5
AARSP49588 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.514e-6■■■□□ 17.5
AARSP49588 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.16■□□□□ 0.54e-6■■■□□ 17.5
AARSP49588 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.472e-7■■■□□ 17.5
AARSP49588 PI4KA-202ENST00000399213 1636 ntTSL 517.73■□□□□ 0.434e-6■■■□□ 17.5
AARSP49588 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.44e-6■■■□□ 17.5
AARSP49588 FBXL19-203ENST00000427128 3312 ntTSL 1 (best)17.44■□□□□ 0.382e-7■■■□□ 17.5
AARSP49588 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.381e-8■■■□□ 17.5
AARSP49588 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.22■□□□□ 0.354e-6■■■□□ 17.5
AARSP49588 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.63■□□□□ 0.254e-6■■■□□ 17.5
AARSP49588 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.252e-7■■■□□ 17.5
AARSP49588 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.234e-6■■■□□ 17.5
AARSP49588 SREBF1-222ENST00000583732 580 ntTSL 416.44■□□□□ 0.224e-6■■■□□ 17.5
AARSP49588 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.24e-6■■■□□ 17.5
AARSP49588 SF3A2-202ENST00000586396 543 ntAPPRIS ALT2 TSL 316.24■□□□□ 0.192e-7■■■□□ 17.5
AARSP49588 SF3A2-206ENST00000592314 885 ntTSL 516.15■□□□□ 0.182e-7■■■□□ 17.5
AARSP49588 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.08■□□□□ 0.162e-7■■■□□ 17.5
AARSP49588 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.95■□□□□ 0.144e-6■■■□□ 17.5
AARSP49588 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.114e-6■■■□□ 17.5
AARSP49588 SRPK2-206ENST00000465112 568 ntTSL 315.63■□□□□ 0.094e-6■■■□□ 17.5
AARSP49588 RPL3-205ENST00000427905 782 ntTSL 515.45■□□□□ 0.068e-10■■■□□ 17.5
AARSP49588 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.44■□□□□ 0.061e-8■■■□□ 17.5
AARSP49588 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.062e-7■■■□□ 17.5
AARSP49588 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.064e-6■■■□□ 17.5
AARSP49588 RPL3-211ENST00000465618 2108 ntTSL 1 (best)15.41■□□□□ 0.068e-10■■■□□ 17.5
AARSP49588 WDR60-203ENST00000444851 2769 ntTSL 1 (best)15.23■□□□□ 0.034e-6■■■□□ 17.5
AARSP49588 GSR-203ENST00000523295 913 ntTSL 315.08■□□□□ 04e-6■■■□□ 17.5
AARSP49588 CNTROB-210ENST00000575408 917 ntTSL 315.02■□□□□ -04e-6■■■□□ 17.5
AARSP49588 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.98□□□□□ -0.014e-6■■■□□ 17.5
AARSP49588 SRPK2-203ENST00000460391 666 ntTSL 214.93□□□□□ -0.024e-6■■■□□ 17.5
AARSP49588 AP1G1-208ENST00000565009 2494 ntTSL 514.89□□□□□ -0.034e-6■■■□□ 17.5
AARSP49588 SMC2-204ENST00000440179 705 ntTSL 314.82□□□□□ -0.044e-6■■■□□ 17.5
AARSP49588 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.054e-6■■■□□ 17.5
AARSP49588 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.064e-6■■■□□ 17.5
AARSP49588 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.064e-6■■■□□ 17.5
AARSP49588 CNTROB-206ENST00000571540 1209 ntTSL 514.65□□□□□ -0.064e-6■■■□□ 17.5
AARSP49588 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.085e-11■■■□□ 17.5
AARSP49588 SREBF1-217ENST00000577897 536 ntTSL 414.5□□□□□ -0.094e-6■■■□□ 17.5
AARSP49588 RPL3-206ENST00000453303 916 ntTSL 514.39□□□□□ -0.118e-10■■■□□ 17.5
AARSP49588 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC14.22□□□□□ -0.134e-6■■■□□ 17.5
AARSP49588 RPL3-209ENST00000461967 767 ntTSL 214.2□□□□□ -0.148e-10■■■□□ 17.5
AARSP49588 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC14.12□□□□□ -0.154e-6■■■□□ 17.5
AARSP49588 RPL3-217ENST00000484615 827 ntTSL 214.11□□□□□ -0.158e-10■■■□□ 17.5
AARSP49588 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.154e-6■■■□□ 17.5
AARSP49588 TBX1-204ENST00000475303 546 ntTSL 214.05□□□□□ -0.164e-6■■■□□ 17.5
AARSP49588 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.194e-6■■■□□ 17.5
AARSP49588 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.83□□□□□ -0.21e-8■■■□□ 17.5
AARSP49588 ZNF276-206ENST00000563983 3403 ntTSL 213.77□□□□□ -0.214e-6■■■□□ 17.5
AARSP49588 TNIP1-213ENST00000522100 877 ntTSL 313.69□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.68□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.224e-6■■■□□ 17.5
AARSP49588 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.234e-6■■■□□ 17.5
AARSP49588 CNTROB-207ENST00000571632 2960 ntTSL 213.59□□□□□ -0.234e-6■■■□□ 17.5
AARSP49588 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC13.49□□□□□ -0.254e-6■■■□□ 17.5
AARSP49588 SRPK2-204ENST00000462282 505 ntTSL 313.31□□□□□ -0.284e-6■■■□□ 17.5
AARSP49588 PI4KA-217ENST00000492581 3925 ntTSL 213.23□□□□□ -0.294e-6■■■□□ 17.5
AARSP49588 TTF2-205ENST00000470935 849 ntTSL 512.99□□□□□ -0.334e-6■■■□□ 17.5
AARSP49588 HYOU1-208ENST00000531682 319 ntTSL 212.94□□□□□ -0.344e-6■■■□□ 17.5
AARSP49588 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.374e-6■■■□□ 17.5
AARSP49588 CNTROB-213ENST00000576587 903 ntTSL 212.55□□□□□ -0.44e-6■■■□□ 17.5
AARSP49588 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.46□□□□□ -0.422e-7■■■□□ 17.5
AARSP49588 HERC1-204ENST00000559715 495 ntTSL 212.13□□□□□ -0.474e-6■■■□□ 17.5
AARSP49588 ABCF1-205ENST00000475993 2860 ntTSL 1 (best)12.06□□□□□ -0.484e-6■■■□□ 17.5
AARSP49588 SUPT16H-207ENST00000557394 2324 ntTSL 211.95□□□□□ -0.58e-10■■■□□ 17.5
AARSP49588 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.54e-6■■■□□ 17.5
AARSP49588 ACTR3C-204ENST00000478393 5697 ntTSL 1 (best)11.88□□□□□ -0.514e-6■■■□□ 17.5
Retrieved 100 of 8,200 protein–RNA pairs in 134.7 ms