RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
SMC2-204ENST00000440179 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
SMC2-204ENST00000440179 ABCC9O60706 1549 aa32.22■■■□□ 2.75
SMC2-204ENST00000440179 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
SMC2-204ENST00000440179 CHIC1Q5VXU3 224 aa31.38■■■□□ 2.61
SMC2-204ENST00000440179 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
SMC2-204ENST00000440179 RB1CC1Q8TDY2 1594 aa30.39■■■□□ 2.46
SMC2-204ENST00000440179 NACADO15069 1562 aa30.06■■■□□ 2.4
SMC2-204ENST00000440179 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
SMC2-204ENST00000440179 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
SMC2-204ENST00000440179 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
SMC2-204ENST00000440179 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
SMC2-204ENST00000440179 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
SMC2-204ENST00000440179 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
SMC2-204ENST00000440179 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
SMC2-204ENST00000440179 CC2D2AQ9P2K1 1620 aa29.08■■■□□ 2.25
SMC2-204ENST00000440179 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
SMC2-204ENST00000440179 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
SMC2-204ENST00000440179 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
SMC2-204ENST00000440179 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
SMC2-204ENST00000440179 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
SMC2-204ENST00000440179 CUX2O14529 1486 aa27.98■■■□□ 2.07
SMC2-204ENST00000440179 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
SMC2-204ENST00000440179 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
SMC2-204ENST00000440179 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
SMC2-204ENST00000440179 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
SMC2-204ENST00000440179 NESP48681 1621 aa27.55■■■□□ 2
SMC2-204ENST00000440179 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
SMC2-204ENST00000440179 HMGXB3Q12766 1538 aa27.52■■■□□ 2
SMC2-204ENST00000440179 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
SMC2-204ENST00000440179 SMARCA4P51532 1647 aa27.45■■□□□ 1.98
SMC2-204ENST00000440179 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
SMC2-204ENST00000440179 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
SMC2-204ENST00000440179 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
SMC2-204ENST00000440179 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
SMC2-204ENST00000440179 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
SMC2-204ENST00000440179 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
SMC2-204ENST00000440179 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
SMC2-204ENST00000440179 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
SMC2-204ENST00000440179 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SMC2-204ENST00000440179 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
SMC2-204ENST00000440179 MRC2Q9UBG0 1479 aa26.89■■□□□ 1.9
SMC2-204ENST00000440179 WDR62O43379 1518 aa26.86■■□□□ 1.89
SMC2-204ENST00000440179 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
SMC2-204ENST00000440179 WIZO95785 1651 aa26.63■■□□□ 1.85
SMC2-204ENST00000440179 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
SMC2-204ENST00000440179 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
SMC2-204ENST00000440179 CFTRP13569 1480 aa26.5■■□□□ 1.83
SMC2-204ENST00000440179 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.83
SMC2-204ENST00000440179 RIMBP3CA6NJZ7 1639 aa26.34■■□□□ 1.81
SMC2-204ENST00000440179 RIMBP3BA6NNM3 1639 aa26.34■■□□□ 1.81
SMC2-204ENST00000440179 RIMBP3Q9UFD9 1639 aa26.34■■□□□ 1.81
SMC2-204ENST00000440179 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
SMC2-204ENST00000440179 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SMC2-204ENST00000440179 ZNF608Q9ULD9 1512 aaPredicted RBP26.22■■□□□ 1.79
SMC2-204ENST00000440179 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
SMC2-204ENST00000440179 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
SMC2-204ENST00000440179 PRDM2Q13029 1718 aa26.13■■□□□ 1.77
SMC2-204ENST00000440179 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
SMC2-204ENST00000440179 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
SMC2-204ENST00000440179 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
SMC2-204ENST00000440179 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
SMC2-204ENST00000440179 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
SMC2-204ENST00000440179 CHD1O14646 1710 aa25.9■■□□□ 1.74
SMC2-204ENST00000440179 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
SMC2-204ENST00000440179 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.73
SMC2-204ENST00000440179 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
SMC2-204ENST00000440179 TARBP1Q13395 1621 aaKnown RBP25.87■■□□□ 1.73
SMC2-204ENST00000440179 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
SMC2-204ENST00000440179 FOXD1Q16676 465 aa25.82■■□□□ 1.72
SMC2-204ENST00000440179 FBLN2P98095 1184 aa25.76■■□□□ 1.71
SMC2-204ENST00000440179 POLA1P09884 1462 aaPredicted RBP25.75■■□□□ 1.71
SMC2-204ENST00000440179 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
SMC2-204ENST00000440179 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.7
SMC2-204ENST00000440179 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
SMC2-204ENST00000440179 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
SMC2-204ENST00000440179 SOGA1O94964 1423 aa25.59■■□□□ 1.69
SMC2-204ENST00000440179 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
SMC2-204ENST00000440179 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
SMC2-204ENST00000440179 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
SMC2-204ENST00000440179 MAGI1Q96QZ7 1491 aaPredicted RBP25.5■■□□□ 1.67
SMC2-204ENST00000440179 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
SMC2-204ENST00000440179 GRIN2BQ13224 1484 aa25.44■■□□□ 1.66
SMC2-204ENST00000440179 SYNJ2O15056 1496 aa25.42■■□□□ 1.66
SMC2-204ENST00000440179 CUX1P39880 1505 aa25.42■■□□□ 1.66
SMC2-204ENST00000440179 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
SMC2-204ENST00000440179 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
SMC2-204ENST00000440179 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
SMC2-204ENST00000440179 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
SMC2-204ENST00000440179 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
SMC2-204ENST00000440179 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
SMC2-204ENST00000440179 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
SMC2-204ENST00000440179 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
SMC2-204ENST00000440179 NUP160Q12769 1436 aa25.09■■□□□ 1.61
SMC2-204ENST00000440179 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
SMC2-204ENST00000440179 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
SMC2-204ENST00000440179 KIF13AQ9H1H9 1805 aa24.98■■□□□ 1.59
SMC2-204ENST00000440179 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
SMC2-204ENST00000440179 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
SMC2-204ENST00000440179 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms