RNA–Protein interactions for RNA: ENST00000465618.5

RPL3-211, Transcript of ribosomal protein L3, humanhuman

TSL 1 (best)

Gene RPL3, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-211ENST00000465618 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
RPL3-211ENST00000465618 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
RPL3-211ENST00000465618 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
RPL3-211ENST00000465618 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
RPL3-211ENST00000465618 ABCC9O60706 1549 aa27.45■■□□□ 1.99
RPL3-211ENST00000465618 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
RPL3-211ENST00000465618 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
RPL3-211ENST00000465618 NACADO15069 1562 aa26.98■■□□□ 1.91
RPL3-211ENST00000465618 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
RPL3-211ENST00000465618 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
RPL3-211ENST00000465618 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
RPL3-211ENST00000465618 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.78
RPL3-211ENST00000465618 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
RPL3-211ENST00000465618 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
RPL3-211ENST00000465618 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
RPL3-211ENST00000465618 CECR2Q9BXF3 1484 aa25.77■■□□□ 1.72
RPL3-211ENST00000465618 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
RPL3-211ENST00000465618 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
RPL3-211ENST00000465618 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
RPL3-211ENST00000465618 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
RPL3-211ENST00000465618 WIZO95785 1651 aa25.37■■□□□ 1.65
RPL3-211ENST00000465618 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
RPL3-211ENST00000465618 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
RPL3-211ENST00000465618 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
RPL3-211ENST00000465618 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
RPL3-211ENST00000465618 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
RPL3-211ENST00000465618 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
RPL3-211ENST00000465618 NCAPD3P42695 1498 aa24.93■■□□□ 1.58
RPL3-211ENST00000465618 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
RPL3-211ENST00000465618 HMGXB3Q12766 1538 aa24.84■■□□□ 1.57
RPL3-211ENST00000465618 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
RPL3-211ENST00000465618 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
RPL3-211ENST00000465618 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
RPL3-211ENST00000465618 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
RPL3-211ENST00000465618 CFTRP13569 1480 aa24.34■■□□□ 1.49
RPL3-211ENST00000465618 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
RPL3-211ENST00000465618 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
RPL3-211ENST00000465618 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.465e-6■□□□□ 8.4
RPL3-211ENST00000465618 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
RPL3-211ENST00000465618 NESP48681 1621 aa24.08■■□□□ 1.45
RPL3-211ENST00000465618 LAMC3Q9Y6N6 1575 aa24.06■■□□□ 1.44
RPL3-211ENST00000465618 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
RPL3-211ENST00000465618 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
RPL3-211ENST00000465618 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
RPL3-211ENST00000465618 FAM9AQ8IZU1 332 aaPredicted RBP23.93■■□□□ 1.42
RPL3-211ENST00000465618 CUX1P39880 1505 aa23.93■■□□□ 1.42
RPL3-211ENST00000465618 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
RPL3-211ENST00000465618 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
RPL3-211ENST00000465618 SOGA1O94964 1423 aa23.85■■□□□ 1.41
RPL3-211ENST00000465618 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
RPL3-211ENST00000465618 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
RPL3-211ENST00000465618 EEA1Q15075 1411 aa23.77■■□□□ 1.4
RPL3-211ENST00000465618 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
RPL3-211ENST00000465618 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
RPL3-211ENST00000465618 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
RPL3-211ENST00000465618 TOPBP1Q92547 1522 aa23.72■■□□□ 1.39
RPL3-211ENST00000465618 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
RPL3-211ENST00000465618 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
RPL3-211ENST00000465618 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
RPL3-211ENST00000465618 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
RPL3-211ENST00000465618 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
RPL3-211ENST00000465618 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.36
RPL3-211ENST00000465618 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
RPL3-211ENST00000465618 ERCC6Q03468 1493 aa23.55■■□□□ 1.36
RPL3-211ENST00000465618 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
RPL3-211ENST00000465618 CUX2O14529 1486 aa23.52■■□□□ 1.36
RPL3-211ENST00000465618 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
RPL3-211ENST00000465618 WDR62O43379 1518 aa23.45■■□□□ 1.34
RPL3-211ENST00000465618 KIF21BO75037 1637 aa23.44■■□□□ 1.34
RPL3-211ENST00000465618 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
RPL3-211ENST00000465618 IGF1RP08069 1367 aa23.41■■□□□ 1.34
RPL3-211ENST00000465618 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
RPL3-211ENST00000465618 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
RPL3-211ENST00000465618 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
RPL3-211ENST00000465618 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
RPL3-211ENST00000465618 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
RPL3-211ENST00000465618 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
RPL3-211ENST00000465618 RAPGEF2Q9Y4G8 1499 aa23.35■■□□□ 1.33
RPL3-211ENST00000465618 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.33
RPL3-211ENST00000465618 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
RPL3-211ENST00000465618 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
RPL3-211ENST00000465618 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
RPL3-211ENST00000465618 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
RPL3-211ENST00000465618 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
RPL3-211ENST00000465618 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
RPL3-211ENST00000465618 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.36e-8■■■■■ 38.9
RPL3-211ENST00000465618 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
RPL3-211ENST00000465618 CUL7Q14999 1698 aa23.16■■□□□ 1.3
RPL3-211ENST00000465618 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
RPL3-211ENST00000465618 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
RPL3-211ENST00000465618 CLIP1P30622 1438 aa23.06■■□□□ 1.28
RPL3-211ENST00000465618 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
RPL3-211ENST00000465618 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
RPL3-211ENST00000465618 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
RPL3-211ENST00000465618 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
RPL3-211ENST00000465618 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
RPL3-211ENST00000465618 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
RPL3-211ENST00000465618 CTTNBP2Q8WZ74 1663 aa22.88■■□□□ 1.25
RPL3-211ENST00000465618 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
RPL3-211ENST00000465618 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms