RNA–Protein interactions for RNA: ENST00000520931.5

TNIP1-208, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-208ENST00000520931 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
TNIP1-208ENST00000520931 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
TNIP1-208ENST00000520931 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
TNIP1-208ENST00000520931 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
TNIP1-208ENST00000520931 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
TNIP1-208ENST00000520931 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
TNIP1-208ENST00000520931 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
TNIP1-208ENST00000520931 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
TNIP1-208ENST00000520931 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
TNIP1-208ENST00000520931 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
TNIP1-208ENST00000520931 HRCP23327 699 aa28.61■■■□□ 2.17
TNIP1-208ENST00000520931 LOC105371045A0A1W2PR82 267 aa28.58■■■□□ 2.17
TNIP1-208ENST00000520931 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
TNIP1-208ENST00000520931 ABCC9O60706 1549 aa28.43■■■□□ 2.14
TNIP1-208ENST00000520931 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
TNIP1-208ENST00000520931 PPARGC1BQ86YN6 1023 aaKnown RBP28.2■■■□□ 2.1
TNIP1-208ENST00000520931 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
TNIP1-208ENST00000520931 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
TNIP1-208ENST00000520931 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
TNIP1-208ENST00000520931 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
TNIP1-208ENST00000520931 EHMT2Q96KQ7 1210 aa27.89■■■□□ 2.05
TNIP1-208ENST00000520931 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
TNIP1-208ENST00000520931 NACADO15069 1562 aa27.8■■■□□ 2.04
TNIP1-208ENST00000520931 MROH2BQ7Z745 1585 aa27.76■■■□□ 2.03
TNIP1-208ENST00000520931 WIZO95785 1651 aa27.64■■■□□ 2.02
TNIP1-208ENST00000520931 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
TNIP1-208ENST00000520931 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
TNIP1-208ENST00000520931 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
TNIP1-208ENST00000520931 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
TNIP1-208ENST00000520931 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
TNIP1-208ENST00000520931 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
TNIP1-208ENST00000520931 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
TNIP1-208ENST00000520931 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
TNIP1-208ENST00000520931 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
TNIP1-208ENST00000520931 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
TNIP1-208ENST00000520931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.91
TNIP1-208ENST00000520931 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.9
TNIP1-208ENST00000520931 SOGA1O94964 1423 aa26.89■■□□□ 1.89
TNIP1-208ENST00000520931 CCER1Q8TC90 406 aaPredicted RBP26.83■■□□□ 1.89
TNIP1-208ENST00000520931 CEP162Q5TB80 1403 aa26.79■■□□□ 1.88
TNIP1-208ENST00000520931 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
TNIP1-208ENST00000520931 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
TNIP1-208ENST00000520931 CSRNP3Q8WYN3 585 aa26.71■■□□□ 1.87
TNIP1-208ENST00000520931 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
TNIP1-208ENST00000520931 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
TNIP1-208ENST00000520931 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
TNIP1-208ENST00000520931 EEA1Q15075 1411 aa26.56■■□□□ 1.84
TNIP1-208ENST00000520931 SCAF1Q9H7N4 1312 aaKnown RBP26.52■■□□□ 1.84
TNIP1-208ENST00000520931 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
TNIP1-208ENST00000520931 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
TNIP1-208ENST00000520931 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
TNIP1-208ENST00000520931 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
TNIP1-208ENST00000520931 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
TNIP1-208ENST00000520931 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
TNIP1-208ENST00000520931 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
TNIP1-208ENST00000520931 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
TNIP1-208ENST00000520931 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
TNIP1-208ENST00000520931 CLIP1P30622 1438 aa26.26■■□□□ 1.79
TNIP1-208ENST00000520931 KIF21BO75037 1637 aa26.23■■□□□ 1.79
TNIP1-208ENST00000520931 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
TNIP1-208ENST00000520931 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
TNIP1-208ENST00000520931 ACIN1Q9UKV3 1341 aaKnown RBP26.16■■□□□ 1.78
TNIP1-208ENST00000520931 APLP2Q06481 763 aa26.11■■□□□ 1.77
TNIP1-208ENST00000520931 VPS8Q8N3P4 1428 aa26.1■■□□□ 1.77
TNIP1-208ENST00000520931 ZNF316A6NFI3 1004 aaPredicted RBP26.06■■□□□ 1.76
TNIP1-208ENST00000520931 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
TNIP1-208ENST00000520931 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
TNIP1-208ENST00000520931 GTF3C3Q9Y5Q9 886 aa25.95■■□□□ 1.74
TNIP1-208ENST00000520931 YTHDC1Q96MU7 727 aaKnown RBP25.89■■□□□ 1.74
TNIP1-208ENST00000520931 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.74
TNIP1-208ENST00000520931 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
TNIP1-208ENST00000520931 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
TNIP1-208ENST00000520931 CUX1P39880 1505 aa25.81■■□□□ 1.72
TNIP1-208ENST00000520931 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
TNIP1-208ENST00000520931 MIER1Q8N108 512 aa25.79■■□□□ 1.72
TNIP1-208ENST00000520931 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
TNIP1-208ENST00000520931 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
TNIP1-208ENST00000520931 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
TNIP1-208ENST00000520931 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
TNIP1-208ENST00000520931 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
TNIP1-208ENST00000520931 CFTRP13569 1480 aa25.64■■□□□ 1.69
TNIP1-208ENST00000520931 DHX57Q6P158 1386 aaKnown RBP25.61■■□□□ 1.69
TNIP1-208ENST00000520931 ITGAEP38570 1179 aa25.6■■□□□ 1.69
TNIP1-208ENST00000520931 ARHGAP35Q9NRY4 1499 aa25.55■■□□□ 1.68
TNIP1-208ENST00000520931 CUX2O14529 1486 aa25.5■■□□□ 1.67
TNIP1-208ENST00000520931 RRBP1Q9P2E9 1410 aaKnown RBP25.48■■□□□ 1.67
TNIP1-208ENST00000520931 CLSPNQ9HAW4 1339 aa25.46■■□□□ 1.67
TNIP1-208ENST00000520931 CCNB3Q8WWL7 1395 aa25.45■■□□□ 1.66
TNIP1-208ENST00000520931 IGF1RP08069 1367 aa25.44■■□□□ 1.66
TNIP1-208ENST00000520931 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
TNIP1-208ENST00000520931 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
TNIP1-208ENST00000520931 CARMIL1Q5VZK9 1371 aa25.36■■□□□ 1.65
TNIP1-208ENST00000520931 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
TNIP1-208ENST00000520931 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
TNIP1-208ENST00000520931 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
TNIP1-208ENST00000520931 RAB3GAP2Q9H2M9 1393 aa25.27■■□□□ 1.64
TNIP1-208ENST00000520931 TIAM1Q13009 1591 aa25.26■■□□□ 1.63
TNIP1-208ENST00000520931 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
TNIP1-208ENST00000520931 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.62
TNIP1-208ENST00000520931 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms