RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
SREBF1-203ENST00000395751 MYT1Q01538 1121 aa27.62■■■□□ 2.01
SREBF1-203ENST00000395751 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
SREBF1-203ENST00000395751 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
SREBF1-203ENST00000395751 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
SREBF1-203ENST00000395751 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
SREBF1-203ENST00000395751 CENPBP07199 599 aaPredicted RBP26.81■■□□□ 1.88
SREBF1-203ENST00000395751 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.86
SREBF1-203ENST00000395751 HRCP23327 699 aa26.64■■□□□ 1.86
SREBF1-203ENST00000395751 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
SREBF1-203ENST00000395751 ERICH6Q7L0X2 663 aa26.13■■□□□ 1.77
SREBF1-203ENST00000395751 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
SREBF1-203ENST00000395751 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
SREBF1-203ENST00000395751 PPARGC1BQ86YN6 1023 aaKnown RBP25.91■■□□□ 1.74
SREBF1-203ENST00000395751 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
SREBF1-203ENST00000395751 YTHDC1Q96MU7 727 aaKnown RBP25.82■■□□□ 1.72
SREBF1-203ENST00000395751 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
SREBF1-203ENST00000395751 APLP2Q06481 763 aa25.6■■□□□ 1.69
SREBF1-203ENST00000395751 NEFLP07196 543 aa25.56■■□□□ 1.68
SREBF1-203ENST00000395751 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
SREBF1-203ENST00000395751 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
SREBF1-203ENST00000395751 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
SREBF1-203ENST00000395751 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
SREBF1-203ENST00000395751 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
SREBF1-203ENST00000395751 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
SREBF1-203ENST00000395751 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
SREBF1-203ENST00000395751 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
SREBF1-203ENST00000395751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
SREBF1-203ENST00000395751 RTL5Q5HYW3 569 aaPredicted RBP24.73■■□□□ 1.55
SREBF1-203ENST00000395751 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
SREBF1-203ENST00000395751 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
SREBF1-203ENST00000395751 DAXXQ9UER7 740 aaPredicted RBP24.55■■□□□ 1.52
SREBF1-203ENST00000395751 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
SREBF1-203ENST00000395751 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
SREBF1-203ENST00000395751 BCANQ96GW7 911 aa24.47■■□□□ 1.51
SREBF1-203ENST00000395751 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
SREBF1-203ENST00000395751 CLSPNQ9HAW4 1339 aa24.42■■□□□ 1.5
SREBF1-203ENST00000395751 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
SREBF1-203ENST00000395751 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
SREBF1-203ENST00000395751 DCAF1Q9Y4B6 1507 aa24.21■■□□□ 1.47
SREBF1-203ENST00000395751 ANP32EQ9BTT0 268 aa24.13■■□□□ 1.45
SREBF1-203ENST00000395751 ATP1B4Q9UN42 357 aaPredicted RBP24.07■■□□□ 1.44
SREBF1-203ENST00000395751 EIF5BO60841 1220 aaKnown RBP24.03■■□□□ 1.44
SREBF1-203ENST00000395751 ITGAEP38570 1179 aa24.03■■□□□ 1.44
SREBF1-203ENST00000395751 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
SREBF1-203ENST00000395751 FKBP8Q14318 412 aa23.95■■□□□ 1.42
SREBF1-203ENST00000395751 ANP32CO43423 234 aa23.9■■□□□ 1.42
SREBF1-203ENST00000395751 ANP32AP39687 249 aaKnown RBP23.89■■□□□ 1.41
SREBF1-203ENST00000395751 GLIPR1L2Q4G1C9 344 aa23.84■■□□□ 1.41
SREBF1-203ENST00000395751 POLR3GLQ9BT43 218 aa23.76■■□□□ 1.39
SREBF1-203ENST00000395751 MIER1Q8N108 512 aa23.75■■□□□ 1.39
SREBF1-203ENST00000395751 CNGB1Q14028 1251 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-203ENST00000395751 NBR1Q14596 966 aa23.64■■□□□ 1.38
SREBF1-203ENST00000395751 ZBTB47Q9UFB7 747 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-203ENST00000395751 NPM2Q86SE8 214 aaKnown RBP23.51■■□□□ 1.35
SREBF1-203ENST00000395751 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
SREBF1-203ENST00000395751 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
SREBF1-203ENST00000395751 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
SREBF1-203ENST00000395751 HNRNPUQ00839 825 aaKnown RBP eCLIP23.37■■□□□ 1.33
SREBF1-203ENST00000395751 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
SREBF1-203ENST00000395751 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
SREBF1-203ENST00000395751 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.32
SREBF1-203ENST00000395751 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
SREBF1-203ENST00000395751 CCDC136Q96JN2 1154 aa23.23■■□□□ 1.31
SREBF1-203ENST00000395751 DEKP35659 375 aaKnown RBP23.19■■□□□ 1.3
SREBF1-203ENST00000395751 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
SREBF1-203ENST00000395751 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.3
SREBF1-203ENST00000395751 RTN4Q9NQC3 1192 aaKnown RBP23.14■■□□□ 1.3
SREBF1-203ENST00000395751 TSHZ2Q9NRE2 1034 aa23.14■■□□□ 1.29
SREBF1-203ENST00000395751 ANP32BQ92688 251 aaKnown RBP23.1■■□□□ 1.29
SREBF1-203ENST00000395751 NEFMP07197 916 aa23.06■■□□□ 1.28
SREBF1-203ENST00000395751 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
SREBF1-203ENST00000395751 ERICH6BQ5W0A0 696 aa23.05■■□□□ 1.28
SREBF1-203ENST00000395751 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
SREBF1-203ENST00000395751 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
SREBF1-203ENST00000395751 DDRGK1Q96HY6 314 aa22.93■■□□□ 1.26
SREBF1-203ENST00000395751 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
SREBF1-203ENST00000395751 PPP4R2Q9NY27 417 aa22.9■■□□□ 1.26
SREBF1-203ENST00000395751 UPF2Q9HAU5 1272 aaKnown RBP22.9■■□□□ 1.26
SREBF1-203ENST00000395751 ARXQ96QS3 562 aa22.88■■□□□ 1.25
SREBF1-203ENST00000395751 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
SREBF1-203ENST00000395751 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
SREBF1-203ENST00000395751 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
SREBF1-203ENST00000395751 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
SREBF1-203ENST00000395751 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-203ENST00000395751 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
SREBF1-203ENST00000395751 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-203ENST00000395751 TRIM44Q96DX7 344 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-203ENST00000395751 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
SREBF1-203ENST00000395751 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
SREBF1-203ENST00000395751 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
SREBF1-203ENST00000395751 TNNT2P45379 298 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-203ENST00000395751 BECN1Q14457 450 aa22.65■■□□□ 1.22
SREBF1-203ENST00000395751 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
SREBF1-203ENST00000395751 SALL2Q9Y467 1007 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-203ENST00000395751 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-203ENST00000395751 PRKCSHP14314 528 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-203ENST00000395751 CCER2I3L3R5 266 aa22.54■■□□□ 1.2
SREBF1-203ENST00000395751 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
SREBF1-203ENST00000395751 EIF4G2P78344 907 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■■□ 25.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms