RNA–Protein interactions for RNA: ENST00000216146.8

RPL3-201, Transcript of ribosomal protein L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL3, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-201ENST00000216146 NISCHQ9Y2I1 1504 aa43.52■■■■■ 4.56
RPL3-201ENST00000216146 ABCC9O60706 1549 aa40.13■■■■■ 4.02
RPL3-201ENST00000216146 CCDC180Q9P1Z9 1646 aa39.05■■■■□ 3.84
RPL3-201ENST00000216146 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
RPL3-201ENST00000216146 RB1CC1Q8TDY2 1594 aa37.73■■■■□ 3.63
RPL3-201ENST00000216146 NACADO15069 1562 aa37.19■■■■□ 3.54
RPL3-201ENST00000216146 PABPN1Q86U42 306 aaKnown RBP eCLIP37.15■■■■□ 3.54
RPL3-201ENST00000216146 UNC13AQ9UPW8 1703 aa36.92■■■■□ 3.5
RPL3-201ENST00000216146 BICRAQ9NZM4 1560 aa36.66■■■■□ 3.46
RPL3-201ENST00000216146 DCAF8L2P0C7V8 631 aa36.65■■■■□ 3.46
RPL3-201ENST00000216146 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
RPL3-201ENST00000216146 ZCCHC6Q5VYS8 1495 aaKnown RBP36.3■■■■□ 3.4
RPL3-201ENST00000216146 CECR2Q9BXF3 1484 aa36.3■■■■□ 3.4
RPL3-201ENST00000216146 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
RPL3-201ENST00000216146 CC2D2AQ9P2K1 1620 aa36.23■■■■□ 3.39
RPL3-201ENST00000216146 SHROOM4Q9ULL8 1493 aa36.09■■■■□ 3.37
RPL3-201ENST00000216146 DCAF1Q9Y4B6 1507 aa36■■■■□ 3.35
RPL3-201ENST00000216146 EIF4G1Q04637 1599 aaKnown RBP35.86■■■■□ 3.33
RPL3-201ENST00000216146 SCRIBQ14160 1630 aa35.45■■■■□ 3.26
RPL3-201ENST00000216146 CUX2O14529 1486 aa35.14■■■■□ 3.22
RPL3-201ENST00000216146 ERCC6Q03468 1493 aa34.76■■■■□ 3.15
RPL3-201ENST00000216146 NCAPD3P42695 1498 aa34.32■■■■□ 3.09
RPL3-201ENST00000216146 TRIM41Q8WV44 630 aa34.32■■■■□ 3.08
RPL3-201ENST00000216146 NESP48681 1621 aa34.13■■■■□ 3.05
RPL3-201ENST00000216146 THOC2Q8NI27 1593 aaKnown RBP34.07■■■■□ 3.04
RPL3-201ENST00000216146 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
RPL3-201ENST00000216146 HMGXB3Q12766 1538 aa33.97■■■■□ 3.03
RPL3-201ENST00000216146 SMARCA2P51531 1590 aa33.91■■■■□ 3.02
RPL3-201ENST00000216146 LAMC3Q9Y6N6 1575 aa33.76■■■□□ 2.99
RPL3-201ENST00000216146 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
RPL3-201ENST00000216146 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
RPL3-201ENST00000216146 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
RPL3-201ENST00000216146 BAZ1BQ9UIG0 1483 aaKnown RBP33.64■■■□□ 2.98
RPL3-201ENST00000216146 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
RPL3-201ENST00000216146 MROH2BQ7Z745 1585 aa33.56■■■□□ 2.96
RPL3-201ENST00000216146 PEG3Q9GZU2 1588 aa33.42■■■□□ 2.94
RPL3-201ENST00000216146 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
RPL3-201ENST00000216146 WDR62O43379 1518 aa33.33■■■□□ 2.93
RPL3-201ENST00000216146 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
RPL3-201ENST00000216146 RSF1Q96T23 1441 aaPredicted RBP33.3■■■□□ 2.92
RPL3-201ENST00000216146 WIZO95785 1651 aa33.22■■■□□ 2.91
RPL3-201ENST00000216146 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
RPL3-201ENST00000216146 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
RPL3-201ENST00000216146 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
RPL3-201ENST00000216146 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
RPL3-201ENST00000216146 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
RPL3-201ENST00000216146 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
RPL3-201ENST00000216146 FANCD2Q9BXW9 1451 aa32.84■■■□□ 2.85
RPL3-201ENST00000216146 ARHGEF11O15085 1522 aa32.78■■■□□ 2.84
RPL3-201ENST00000216146 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
RPL3-201ENST00000216146 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
RPL3-201ENST00000216146 TRHP20396 242 aaPredicted RBP32.6■■■□□ 2.81
RPL3-201ENST00000216146 CFTRP13569 1480 aa32.59■■■□□ 2.81
RPL3-201ENST00000216146 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
RPL3-201ENST00000216146 AEBP2Q6ZN18 517 aaPredicted RBP32.57■■■□□ 2.8
RPL3-201ENST00000216146 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
RPL3-201ENST00000216146 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
RPL3-201ENST00000216146 IFT140Q96RY7 1462 aa32.38■■■□□ 2.77
RPL3-201ENST00000216146 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
RPL3-201ENST00000216146 PRDM2Q13029 1718 aa32.25■■■□□ 2.75
RPL3-201ENST00000216146 CHD1O14646 1710 aa32.23■■■□□ 2.75
RPL3-201ENST00000216146 EIF4G3O43432 1585 aaKnown RBP32.21■■■□□ 2.75
RPL3-201ENST00000216146 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
RPL3-201ENST00000216146 FBLN2P98095 1184 aa31.99■■■□□ 2.71
RPL3-201ENST00000216146 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.716e-8■■■■■ 38.9
RPL3-201ENST00000216146 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
RPL3-201ENST00000216146 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
RPL3-201ENST00000216146 DNMBPQ6XZF7 1577 aa31.88■■■□□ 2.69
RPL3-201ENST00000216146 CLASP1Q7Z460 1538 aa31.81■■■□□ 2.68
RPL3-201ENST00000216146 SYNJ1O43426 1573 aa31.69■■■□□ 2.66
RPL3-201ENST00000216146 POLA1P09884 1462 aaPredicted RBP31.68■■■□□ 2.66
RPL3-201ENST00000216146 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
RPL3-201ENST00000216146 CHMP7Q8WUX9 453 aaPredicted RBP31.58■■■□□ 2.65
RPL3-201ENST00000216146 TDRD9Q8NDG6 1382 aaKnown RBP31.58■■■□□ 2.65
RPL3-201ENST00000216146 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
RPL3-201ENST00000216146 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
RPL3-201ENST00000216146 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
RPL3-201ENST00000216146 MAGI1Q96QZ7 1491 aaPredicted RBP31.52■■■□□ 2.64
RPL3-201ENST00000216146 SOGA1O94964 1423 aa31.5■■■□□ 2.63
RPL3-201ENST00000216146 CUX1P39880 1505 aa31.46■■■□□ 2.63
RPL3-201ENST00000216146 SYNJ2O15056 1496 aa31.42■■■□□ 2.62
RPL3-201ENST00000216146 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.625e-6■□□□□ 8.4
RPL3-201ENST00000216146 GRIN2BQ13224 1484 aa31.39■■■□□ 2.61
RPL3-201ENST00000216146 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
RPL3-201ENST00000216146 ILDR1Q86SU0 546 aaPredicted RBP31.3■■■□□ 2.6
RPL3-201ENST00000216146 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
RPL3-201ENST00000216146 BIVM-ERCC5R4GMW8 1640 aa31.25■■■□□ 2.59
RPL3-201ENST00000216146 KIF13AQ9H1H9 1805 aa31.24■■■□□ 2.59
RPL3-201ENST00000216146 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
RPL3-201ENST00000216146 ERCC6L2Q5T890 1561 aa31.19■■■□□ 2.58
RPL3-201ENST00000216146 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
RPL3-201ENST00000216146 ABCA10Q8WWZ4 1543 aa31.01■■■□□ 2.56
RPL3-201ENST00000216146 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
RPL3-201ENST00000216146 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
RPL3-201ENST00000216146 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
RPL3-201ENST00000216146 SHROOM2Q13796 1616 aa30.95■■■□□ 2.54
RPL3-201ENST00000216146 NUP160Q12769 1436 aa30.93■■■□□ 2.54
RPL3-201ENST00000216146 FAM69CQ0P6D2 419 aa30.88■■■□□ 2.53
RPL3-201ENST00000216146 ABCC10Q5T3U5 1492 aa30.87■■■□□ 2.53
RPL3-201ENST00000216146 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms