RNA–Protein interactions for RNA: ENST00000478393.5

ACTR3C-204, Transcript of ARP3 actin related protein 3 homolog C, humanhuman

TSL 1 (best)

Gene ACTR3C, Length 5,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3C-204ENST00000478393 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
ACTR3C-204ENST00000478393 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
ACTR3C-204ENST00000478393 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
ACTR3C-204ENST00000478393 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
ACTR3C-204ENST00000478393 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
ACTR3C-204ENST00000478393 APLP2Q06481 763 aa18.1■□□□□ 0.49
ACTR3C-204ENST00000478393 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
ACTR3C-204ENST00000478393 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
ACTR3C-204ENST00000478393 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
ACTR3C-204ENST00000478393 ABCC9O60706 1549 aa17.53■□□□□ 0.4
ACTR3C-204ENST00000478393 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.39
ACTR3C-204ENST00000478393 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
ACTR3C-204ENST00000478393 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
ACTR3C-204ENST00000478393 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.36
ACTR3C-204ENST00000478393 NACADO15069 1562 aa17.21■□□□□ 0.35
ACTR3C-204ENST00000478393 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
ACTR3C-204ENST00000478393 DCAF1Q9Y4B6 1507 aa17.1■□□□□ 0.33
ACTR3C-204ENST00000478393 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
ACTR3C-204ENST00000478393 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
ACTR3C-204ENST00000478393 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
ACTR3C-204ENST00000478393 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTR3C-204ENST00000478393 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
ACTR3C-204ENST00000478393 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
ACTR3C-204ENST00000478393 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
ACTR3C-204ENST00000478393 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
ACTR3C-204ENST00000478393 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
ACTR3C-204ENST00000478393 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
ACTR3C-204ENST00000478393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
ACTR3C-204ENST00000478393 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
ACTR3C-204ENST00000478393 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
ACTR3C-204ENST00000478393 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
ACTR3C-204ENST00000478393 EEA1Q15075 1411 aa16.59■□□□□ 0.25
ACTR3C-204ENST00000478393 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
ACTR3C-204ENST00000478393 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
ACTR3C-204ENST00000478393 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
ACTR3C-204ENST00000478393 NEFLP07196 543 aa16.54■□□□□ 0.24
ACTR3C-204ENST00000478393 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
ACTR3C-204ENST00000478393 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
ACTR3C-204ENST00000478393 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
ACTR3C-204ENST00000478393 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.21
ACTR3C-204ENST00000478393 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
ACTR3C-204ENST00000478393 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
ACTR3C-204ENST00000478393 ITGAEP38570 1179 aa16.27■□□□□ 0.19
ACTR3C-204ENST00000478393 FBLN2P98095 1184 aa16.27■□□□□ 0.19
ACTR3C-204ENST00000478393 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
ACTR3C-204ENST00000478393 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
ACTR3C-204ENST00000478393 HRCP23327 699 aa16.23■□□□□ 0.19
ACTR3C-204ENST00000478393 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
ACTR3C-204ENST00000478393 GOLGA3Q08378 1498 aa16.21■□□□□ 0.18
ACTR3C-204ENST00000478393 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
ACTR3C-204ENST00000478393 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
ACTR3C-204ENST00000478393 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
ACTR3C-204ENST00000478393 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
ACTR3C-204ENST00000478393 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
ACTR3C-204ENST00000478393 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.17
ACTR3C-204ENST00000478393 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
ACTR3C-204ENST00000478393 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
ACTR3C-204ENST00000478393 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
ACTR3C-204ENST00000478393 CLIP1P30622 1438 aa16.01■□□□□ 0.15
ACTR3C-204ENST00000478393 ABCC8Q09428 1581 aa16■□□□□ 0.15
ACTR3C-204ENST00000478393 MYT1Q01538 1121 aa16■□□□□ 0.15
ACTR3C-204ENST00000478393 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
ACTR3C-204ENST00000478393 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
ACTR3C-204ENST00000478393 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
ACTR3C-204ENST00000478393 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
ACTR3C-204ENST00000478393 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
ACTR3C-204ENST00000478393 NEFMP07197 916 aa15.93■□□□□ 0.14
ACTR3C-204ENST00000478393 ANP32CO43423 234 aa15.92■□□□□ 0.14
ACTR3C-204ENST00000478393 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
ACTR3C-204ENST00000478393 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
ACTR3C-204ENST00000478393 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
ACTR3C-204ENST00000478393 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
ACTR3C-204ENST00000478393 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
ACTR3C-204ENST00000478393 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
ACTR3C-204ENST00000478393 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
ACTR3C-204ENST00000478393 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
ACTR3C-204ENST00000478393 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
ACTR3C-204ENST00000478393 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
ACTR3C-204ENST00000478393 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
ACTR3C-204ENST00000478393 CUX2O14529 1486 aa15.76■□□□□ 0.11
ACTR3C-204ENST00000478393 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
ACTR3C-204ENST00000478393 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
ACTR3C-204ENST00000478393 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 BCANQ96GW7 911 aa15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
ACTR3C-204ENST00000478393 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
ACTR3C-204ENST00000478393 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ACTR3C-204ENST00000478393 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
ACTR3C-204ENST00000478393 CDCA8Q53HL2 280 aa15.63■□□□□ 0.09
ACTR3C-204ENST00000478393 WIZO95785 1651 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms