RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 NISCHQ9Y2I1 1504 aa38.07■■■■□ 3.68
SF3A2-202ENST00000586396 ABCC9O60706 1549 aa34.67■■■■□ 3.14
SF3A2-202ENST00000586396 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
SF3A2-202ENST00000586396 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
SF3A2-202ENST00000586396 DNAJC5BQ9UF47 199 aa32.69■■■□□ 2.82
SF3A2-202ENST00000586396 NACADO15069 1562 aa32.56■■■□□ 2.8
SF3A2-202ENST00000586396 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
SF3A2-202ENST00000586396 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
SF3A2-202ENST00000586396 PABPN1Q86U42 306 aaKnown RBP eCLIP32.13■■■□□ 2.73
SF3A2-202ENST00000586396 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
SF3A2-202ENST00000586396 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
SF3A2-202ENST00000586396 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
SF3A2-202ENST00000586396 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
SF3A2-202ENST00000586396 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
SF3A2-202ENST00000586396 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
SF3A2-202ENST00000586396 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
SF3A2-202ENST00000586396 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
SF3A2-202ENST00000586396 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
SF3A2-202ENST00000586396 DNAJC5Q9H3Z4 198 aa30.31■■■□□ 2.44
SF3A2-202ENST00000586396 CUX2O14529 1486 aa30.06■■■□□ 2.4
SF3A2-202ENST00000586396 ERCC6Q03468 1493 aa30.01■■■□□ 2.4
SF3A2-202ENST00000586396 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
SF3A2-202ENST00000586396 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
SF3A2-202ENST00000586396 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
SF3A2-202ENST00000586396 SMARCA2P51531 1590 aa29.84■■■□□ 2.37
SF3A2-202ENST00000586396 SMARCA4P51532 1647 aa29.84■■■□□ 2.37
SF3A2-202ENST00000586396 NESP48681 1621 aa29.68■■■□□ 2.34
SF3A2-202ENST00000586396 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
SF3A2-202ENST00000586396 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
SF3A2-202ENST00000586396 THOC2Q8NI27 1593 aaKnown RBP29.54■■■□□ 2.32
SF3A2-202ENST00000586396 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
SF3A2-202ENST00000586396 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
SF3A2-202ENST00000586396 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
SF3A2-202ENST00000586396 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
SF3A2-202ENST00000586396 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
SF3A2-202ENST00000586396 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
SF3A2-202ENST00000586396 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
SF3A2-202ENST00000586396 WDR62O43379 1518 aa29.02■■■□□ 2.24
SF3A2-202ENST00000586396 WIZO95785 1651 aa29.01■■■□□ 2.23
SF3A2-202ENST00000586396 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
SF3A2-202ENST00000586396 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
SF3A2-202ENST00000586396 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SF3A2-202ENST00000586396 CFTRP13569 1480 aa28.68■■■□□ 2.18
SF3A2-202ENST00000586396 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
SF3A2-202ENST00000586396 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
SF3A2-202ENST00000586396 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
SF3A2-202ENST00000586396 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
SF3A2-202ENST00000586396 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
SF3A2-202ENST00000586396 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
SF3A2-202ENST00000586396 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
SF3A2-202ENST00000586396 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
SF3A2-202ENST00000586396 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SF3A2-202ENST00000586396 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
SF3A2-202ENST00000586396 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
SF3A2-202ENST00000586396 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.11
SF3A2-202ENST00000586396 TOPBP1Q92547 1522 aa28.2■■■□□ 2.1
SF3A2-202ENST00000586396 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
SF3A2-202ENST00000586396 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
SF3A2-202ENST00000586396 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
SF3A2-202ENST00000586396 CHD1O14646 1710 aa28.08■■■□□ 2.09
SF3A2-202ENST00000586396 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
SF3A2-202ENST00000586396 AQRO60306 1485 aaKnown RBP eCLIP27.93■■■□□ 2.069e-9■■■■■ 30.2
SF3A2-202ENST00000586396 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
SF3A2-202ENST00000586396 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
SF3A2-202ENST00000586396 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
SF3A2-202ENST00000586396 FBLN2P98095 1184 aa27.81■■■□□ 2.04
SF3A2-202ENST00000586396 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
SF3A2-202ENST00000586396 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
SF3A2-202ENST00000586396 TRHP20396 242 aaPredicted RBP27.72■■■□□ 2.03
SF3A2-202ENST00000586396 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
SF3A2-202ENST00000586396 SOGA1O94964 1423 aa27.7■■■□□ 2.03
SF3A2-202ENST00000586396 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
SF3A2-202ENST00000586396 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
SF3A2-202ENST00000586396 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
SF3A2-202ENST00000586396 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
SF3A2-202ENST00000586396 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
SF3A2-202ENST00000586396 CUX1P39880 1505 aa27.59■■■□□ 2.01
SF3A2-202ENST00000586396 GRIN2BQ13224 1484 aa27.56■■■□□ 2
SF3A2-202ENST00000586396 PBRM1Q86U86 1689 aa27.56■■■□□ 2
SF3A2-202ENST00000586396 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
SF3A2-202ENST00000586396 SYNJ2O15056 1496 aa27.52■■■□□ 2
SF3A2-202ENST00000586396 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
SF3A2-202ENST00000586396 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.98
SF3A2-202ENST00000586396 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
SF3A2-202ENST00000586396 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
SF3A2-202ENST00000586396 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
SF3A2-202ENST00000586396 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
SF3A2-202ENST00000586396 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
SF3A2-202ENST00000586396 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
SF3A2-202ENST00000586396 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.939e-7■■■□□ 18.8
SF3A2-202ENST00000586396 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
SF3A2-202ENST00000586396 NUP160Q12769 1436 aa27.11■■□□□ 1.93
SF3A2-202ENST00000586396 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
SF3A2-202ENST00000586396 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
SF3A2-202ENST00000586396 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
SF3A2-202ENST00000586396 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
SF3A2-202ENST00000586396 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
SF3A2-202ENST00000586396 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
SF3A2-202ENST00000586396 PRG4Q92954 1404 aaPredicted RBP26.87■■□□□ 1.89
SF3A2-202ENST00000586396 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms