Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM258P61165 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM258P61165 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM258P61165 AC079598.2-202ENST00000546624 1451 ntBASIC12.63□□□□□ -0.39
TMEM258P61165 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM258P61165 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 PCDHB18P-201ENST00000524813 2368 ntBASIC12.62□□□□□ -0.39
TMEM258P61165 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM258P61165 MVK-208ENST00000539696 608 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM258P61165 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM258P61165 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM258P61165 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM258P61165 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM258P61165 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC12.61□□□□□ -0.39
TMEM258P61165 AL049812.1-201ENST00000432563 2267 ntBASIC12.61□□□□□ -0.39
TMEM258P61165 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM258P61165 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TMEM258P61165 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM258P61165 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM258P61165 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM258P61165 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 PRORSD1P-202ENST00000563365 2154 ntBASIC12.6□□□□□ -0.39
TMEM258P61165 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
TMEM258P61165 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 AC244015.2-201ENST00000616358 1861 ntBASIC12.6□□□□□ -0.39
TMEM258P61165 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 AC127502.1-201ENST00000399971 1502 ntBASIC12.6□□□□□ -0.39
TMEM258P61165 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 AL513477.1-201ENST00000602865 2407 ntBASIC12.6□□□□□ -0.39
TMEM258P61165 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
TMEM258P61165 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
TMEM258P61165 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM258P61165 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TMEM258P61165 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM258P61165 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM258P61165 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM258P61165 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM258P61165 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms