RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 NISCHQ9Y2I1 1504 aa41.15■■■■■ 4.18
SUSD1-204ENST00000374270 SHROOM4Q9ULL8 1493 aa36.14■■■■□ 3.38
SUSD1-204ENST00000374270 DCAF8L2P0C7V8 631 aa35.8■■■■□ 3.32
SUSD1-204ENST00000374270 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
SUSD1-204ENST00000374270 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
SUSD1-204ENST00000374270 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
SUSD1-204ENST00000374270 CHIC1Q5VXU3 224 aa33.68■■■□□ 2.98
SUSD1-204ENST00000374270 ABCC9O60706 1549 aa33.45■■■□□ 2.94
SUSD1-204ENST00000374270 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
SUSD1-204ENST00000374270 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
SUSD1-204ENST00000374270 DCAF1Q9Y4B6 1507 aa33.2■■■□□ 2.9
SUSD1-204ENST00000374270 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
SUSD1-204ENST00000374270 EHMT2Q96KQ7 1210 aa33.09■■■□□ 2.89
SUSD1-204ENST00000374270 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
SUSD1-204ENST00000374270 PCGF6Q9BYE7 350 aa32.86■■■□□ 2.85
SUSD1-204ENST00000374270 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
SUSD1-204ENST00000374270 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
SUSD1-204ENST00000374270 CECR2Q9BXF3 1484 aa32.53■■■□□ 2.8
SUSD1-204ENST00000374270 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
SUSD1-204ENST00000374270 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
SUSD1-204ENST00000374270 NACADO15069 1562 aa32.28■■■□□ 2.76
SUSD1-204ENST00000374270 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
SUSD1-204ENST00000374270 HRCP23327 699 aa32.14■■■□□ 2.74
SUSD1-204ENST00000374270 PPARGC1BQ86YN6 1023 aaKnown RBP32.13■■■□□ 2.73
SUSD1-204ENST00000374270 WIZO95785 1651 aa31.98■■■□□ 2.71
SUSD1-204ENST00000374270 TTBK1Q5TCY1 1321 aaPredicted RBP31.84■■■□□ 2.69
SUSD1-204ENST00000374270 TRIM26Q12899 539 aaPredicted RBP31.78■■■□□ 2.68
SUSD1-204ENST00000374270 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
SUSD1-204ENST00000374270 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
SUSD1-204ENST00000374270 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
SUSD1-204ENST00000374270 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
SUSD1-204ENST00000374270 UBTFP17480 764 aaKnown RBP31.33■■■□□ 2.61
SUSD1-204ENST00000374270 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
SUSD1-204ENST00000374270 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
SUSD1-204ENST00000374270 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
SUSD1-204ENST00000374270 SOGA1O94964 1423 aa31.17■■■□□ 2.58
SUSD1-204ENST00000374270 SMARCA2P51531 1590 aa31.1■■■□□ 2.57
SUSD1-204ENST00000374270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
SUSD1-204ENST00000374270 BICRAQ9NZM4 1560 aa31.07■■■□□ 2.56
SUSD1-204ENST00000374270 RUSC2Q8N2Y8 1516 aa31.04■■■□□ 2.56
SUSD1-204ENST00000374270 CSRNP3Q8WYN3 585 aa31.03■■■□□ 2.56
SUSD1-204ENST00000374270 CCER1Q8TC90 406 aaPredicted RBP30.9■■■□□ 2.54
SUSD1-204ENST00000374270 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
SUSD1-204ENST00000374270 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
SUSD1-204ENST00000374270 BAZ1BQ9UIG0 1483 aaKnown RBP30.81■■■□□ 2.52
SUSD1-204ENST00000374270 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
SUSD1-204ENST00000374270 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
SUSD1-204ENST00000374270 ZEB1P37275 1124 aaPredicted RBP30.75■■■□□ 2.51
SUSD1-204ENST00000374270 HNRNPUL2Q1KMD3 747 aaKnown RBP30.6■■■□□ 2.49
SUSD1-204ENST00000374270 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
SUSD1-204ENST00000374270 APLP2Q06481 763 aa30.49■■■□□ 2.47
SUSD1-204ENST00000374270 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
SUSD1-204ENST00000374270 GOLGA3Q08378 1498 aa30.43■■■□□ 2.46
SUSD1-204ENST00000374270 EEA1Q15075 1411 aa30.37■■■□□ 2.45
SUSD1-204ENST00000374270 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
SUSD1-204ENST00000374270 CLIP1P30622 1438 aa30.31■■■□□ 2.44
SUSD1-204ENST00000374270 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
SUSD1-204ENST00000374270 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
SUSD1-204ENST00000374270 ITGAEP38570 1179 aa30.13■■■□□ 2.41
SUSD1-204ENST00000374270 ATP1B4Q9UN42 357 aaPredicted RBP30.11■■■□□ 2.41
SUSD1-204ENST00000374270 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
SUSD1-204ENST00000374270 P3H3Q8IVL6 736 aa30.04■■■□□ 2.4
SUSD1-204ENST00000374270 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
SUSD1-204ENST00000374270 DIEXFQ68CQ4 756 aaKnown RBP29.96■■■□□ 2.39
SUSD1-204ENST00000374270 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
SUSD1-204ENST00000374270 CUX1P39880 1505 aa29.92■■■□□ 2.38
SUSD1-204ENST00000374270 TOP2BQ02880 1626 aa29.9■■■□□ 2.38
SUSD1-204ENST00000374270 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
SUSD1-204ENST00000374270 KIF21BO75037 1637 aa29.85■■■□□ 2.37
SUSD1-204ENST00000374270 CUX2O14529 1486 aa29.8■■■□□ 2.36
SUSD1-204ENST00000374270 CFTRP13569 1480 aa29.8■■■□□ 2.36
SUSD1-204ENST00000374270 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
SUSD1-204ENST00000374270 YTHDC1Q96MU7 727 aaKnown RBP29.79■■■□□ 2.36
SUSD1-204ENST00000374270 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
SUSD1-204ENST00000374270 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
SUSD1-204ENST00000374270 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
SUSD1-204ENST00000374270 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
SUSD1-204ENST00000374270 ZNF316A6NFI3 1004 aaPredicted RBP29.64■■■□□ 2.34
SUSD1-204ENST00000374270 SCAF1Q9H7N4 1312 aaKnown RBP29.64■■■□□ 2.34
SUSD1-204ENST00000374270 NESP48681 1621 aa29.62■■■□□ 2.33
SUSD1-204ENST00000374270 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
SUSD1-204ENST00000374270 IGF1RP08069 1367 aa29.61■■■□□ 2.33
SUSD1-204ENST00000374270 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
SUSD1-204ENST00000374270 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
SUSD1-204ENST00000374270 FGD5Q6ZNL6 1462 aa29.57■■■□□ 2.32
SUSD1-204ENST00000374270 FAM50AQ14320 339 aaKnown RBP29.56■■■□□ 2.32
SUSD1-204ENST00000374270 NEUROD1Q13562 356 aa29.54■■■□□ 2.32
SUSD1-204ENST00000374270 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
SUSD1-204ENST00000374270 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
SUSD1-204ENST00000374270 ARHGAP35Q9NRY4 1499 aa29.45■■■□□ 2.3
SUSD1-204ENST00000374270 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
SUSD1-204ENST00000374270 ARID3CA6NKF2 412 aa29.42■■■□□ 2.3
SUSD1-204ENST00000374270 MIER1Q8N108 512 aa29.4■■■□□ 2.3
SUSD1-204ENST00000374270 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
SUSD1-204ENST00000374270 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
SUSD1-204ENST00000374270 CENPBP07199 599 aaPredicted RBP29.29■■■□□ 2.28
SUSD1-204ENST00000374270 FHOD3Q2V2M9 1422 aa29.28■■■□□ 2.28
SUSD1-204ENST00000374270 CCNB3Q8WWL7 1395 aa29.28■■■□□ 2.28
SUSD1-204ENST00000374270 GTF3C3Q9Y5Q9 886 aa29.28■■■□□ 2.28
SUSD1-204ENST00000374270 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms