RNA–Protein interactions for RNA: ENST00000257868.9

GDF11-201, Transcript of growth differentiation factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GDF11, Length 8,657 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-201ENST00000257868 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
GDF11-201ENST00000257868 PELP1Q8IZL8 1130 aaKnown RBP24.46■■□□□ 1.51
GDF11-201ENST00000257868 ERICH6Q7L0X2 663 aa23.79■■□□□ 1.4
GDF11-201ENST00000257868 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
GDF11-201ENST00000257868 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
GDF11-201ENST00000257868 MYT1Q01538 1121 aa23.31■■□□□ 1.32
GDF11-201ENST00000257868 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
GDF11-201ENST00000257868 APLP2Q06481 763 aa22.89■■□□□ 1.26
GDF11-201ENST00000257868 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
GDF11-201ENST00000257868 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
GDF11-201ENST00000257868 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
GDF11-201ENST00000257868 NEFLP07196 543 aa22.55■■□□□ 1.2
GDF11-201ENST00000257868 DAXXQ9UER7 740 aaPredicted RBP22.51■■□□□ 1.19
GDF11-201ENST00000257868 PCGF6Q9BYE7 350 aa22.37■■□□□ 1.17
GDF11-201ENST00000257868 YTHDC1Q96MU7 727 aaKnown RBP22.32■■□□□ 1.16
GDF11-201ENST00000257868 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
GDF11-201ENST00000257868 ATP1B4Q9UN42 357 aaPredicted RBP22.13■■□□□ 1.13
GDF11-201ENST00000257868 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
GDF11-201ENST00000257868 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
GDF11-201ENST00000257868 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
GDF11-201ENST00000257868 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
GDF11-201ENST00000257868 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
GDF11-201ENST00000257868 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
GDF11-201ENST00000257868 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
GDF11-201ENST00000257868 MYT1LQ9UL68 1186 aa21.59■■□□□ 1.05
GDF11-201ENST00000257868 SLC4A1APQ9BWU0 796 aaKnown RBP21.56■■□□□ 1.04
GDF11-201ENST00000257868 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
GDF11-201ENST00000257868 UBTFP17480 764 aaKnown RBP21.28■■□□□ 1
GDF11-201ENST00000257868 BCL11AQ9H165 835 aa21.28■■□□□ 1
GDF11-201ENST00000257868 EIF5BO60841 1220 aaKnown RBP21.17■□□□□ 0.98
GDF11-201ENST00000257868 ZBTB47Q9UFB7 747 aaPredicted RBP21.16■□□□□ 0.98
GDF11-201ENST00000257868 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
GDF11-201ENST00000257868 ITGAEP38570 1179 aa21.11■□□□□ 0.97
GDF11-201ENST00000257868 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
GDF11-201ENST00000257868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.96
GDF11-201ENST00000257868 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
GDF11-201ENST00000257868 TRIM41Q8WV44 630 aa21■□□□□ 0.95
GDF11-201ENST00000257868 BCANQ96GW7 911 aa20.87■□□□□ 0.93
GDF11-201ENST00000257868 GLIPR1L2Q4G1C9 344 aa20.85■□□□□ 0.93
GDF11-201ENST00000257868 ANP32BQ92688 251 aaKnown RBP20.82■□□□□ 0.92
GDF11-201ENST00000257868 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
GDF11-201ENST00000257868 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
GDF11-201ENST00000257868 HRCP23327 699 aa20.69■□□□□ 0.9
GDF11-201ENST00000257868 CDK11BP21127 795 aaKnown RBP20.63■□□□□ 0.89
GDF11-201ENST00000257868 HSP90AA1P07900 732 aaKnown RBP20.61■□□□□ 0.89
GDF11-201ENST00000257868 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
GDF11-201ENST00000257868 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
GDF11-201ENST00000257868 ARXQ96QS3 562 aa20.5■□□□□ 0.87
GDF11-201ENST00000257868 NEFMP07197 916 aa20.49■□□□□ 0.87
GDF11-201ENST00000257868 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
GDF11-201ENST00000257868 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
GDF11-201ENST00000257868 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
GDF11-201ENST00000257868 TRIM52Q96A61 297 aa20.33■□□□□ 0.85
GDF11-201ENST00000257868 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
GDF11-201ENST00000257868 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
GDF11-201ENST00000257868 ANP32CO43423 234 aa20.26■□□□□ 0.83
GDF11-201ENST00000257868 TULP1O00294 542 aaPredicted RBP20.24■□□□□ 0.83
GDF11-201ENST00000257868 UPF2Q9HAU5 1272 aaKnown RBP20.23■□□□□ 0.83
GDF11-201ENST00000257868 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
GDF11-201ENST00000257868 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
GDF11-201ENST00000257868 NBR1Q14596 966 aa20.18■□□□□ 0.82
GDF11-201ENST00000257868 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
GDF11-201ENST00000257868 AMER1Q5JTC6 1135 aaPredicted RBP20.08■□□□□ 0.81
GDF11-201ENST00000257868 A0A0G2JS52 829 aa20.01■□□□□ 0.79
GDF11-201ENST00000257868 TRIM44Q96DX7 344 aaPredicted RBP19.96■□□□□ 0.79
GDF11-201ENST00000257868 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
GDF11-201ENST00000257868 DNTTIP2Q5QJE6 756 aaKnown RBP19.91■□□□□ 0.78
GDF11-201ENST00000257868 TPRNQ4KMQ1 711 aa19.89■□□□□ 0.77
GDF11-201ENST00000257868 ZRSR1Q15695 479 aaKnown RBP19.85■□□□□ 0.77
GDF11-201ENST00000257868 NCLP19338 710 aaKnown RBP19.85■□□□□ 0.77
GDF11-201ENST00000257868 PTMAP06454 111 aaKnown RBP19.85■□□□□ 0.77
GDF11-201ENST00000257868 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
GDF11-201ENST00000257868 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.76
GDF11-201ENST00000257868 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
GDF11-201ENST00000257868 FKBP8Q14318 412 aa19.79■□□□□ 0.76
GDF11-201ENST00000257868 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.75■□□□□ 0.75
GDF11-201ENST00000257868 TAOK2Q9UL54 1235 aa19.73■□□□□ 0.75
GDF11-201ENST00000257868 ESF1Q9H501 851 aaKnown RBP19.7■□□□□ 0.74
GDF11-201ENST00000257868 NAP1L5Q96NT1 182 aaPredicted RBP19.69■□□□□ 0.74
GDF11-201ENST00000257868 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
GDF11-201ENST00000257868 MYH16Q9H6N6 1097 aa19.68■□□□□ 0.74
GDF11-201ENST00000257868 CLSTN1O94985 981 aa19.67■□□□□ 0.74
GDF11-201ENST00000257868 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
GDF11-201ENST00000257868 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
GDF11-201ENST00000257868 PRM3Q9NNZ6 103 aa19.65■□□□□ 0.74
GDF11-201ENST00000257868 PLCB2Q00722 1185 aa19.64■□□□□ 0.74
GDF11-201ENST00000257868 GOLGA6L22H0YM25 854 aa19.64■□□□□ 0.74
GDF11-201ENST00000257868 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
GDF11-201ENST00000257868 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
GDF11-201ENST00000257868 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.72
GDF11-201ENST00000257868 RTN4Q9NQC3 1192 aaKnown RBP19.57■□□□□ 0.72
GDF11-201ENST00000257868 ZBTB7CA1YPR0 619 aa19.57■□□□□ 0.72
GDF11-201ENST00000257868 FBLN2P98095 1184 aa19.55■□□□□ 0.72
GDF11-201ENST00000257868 BECN1Q14457 450 aa19.54■□□□□ 0.72
GDF11-201ENST00000257868 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
GDF11-201ENST00000257868 ANP32EQ9BTT0 268 aa19.52■□□□□ 0.71
GDF11-201ENST00000257868 GOLGA6L6A8MZA4 724 aa19.49■□□□□ 0.71
GDF11-201ENST00000257868 ARID3CA6NKF2 412 aa19.49■□□□□ 0.71
GDF11-201ENST00000257868 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
GDF11-201ENST00000257868 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms