Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SPTSSBQ8NFR3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SPTSSBQ8NFR3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SPTSSBQ8NFR3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SPTSSBQ8NFR3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ANOS2P-203ENST00000472227 1816 ntBASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
SPTSSBQ8NFR3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 AC092068.2-201ENST00000590491 1708 ntBASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SPTSSBQ8NFR3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 MIR600HG-201ENST00000449175 5984 ntBASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.52□□□□□ -0.57
SPTSSBQ8NFR3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SPTSSBQ8NFR3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms