RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 NISCHQ9Y2I1 1504 aa45.19■■■■■ 4.83
PUF60-203ENST00000453551 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
PUF60-203ENST00000453551 ZCCHC6Q5VYS8 1495 aaKnown RBP38.24■■■■□ 3.71
PUF60-203ENST00000453551 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
PUF60-203ENST00000453551 DCAF1Q9Y4B6 1507 aa37.42■■■■□ 3.58
PUF60-203ENST00000453551 SUPT5HO00267 1087 aaKnown RBP36.76■■■■□ 3.48
PUF60-203ENST00000453551 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
PUF60-203ENST00000453551 MYO15BQ96JP2 1530 aa36.53■■■■□ 3.44
PUF60-203ENST00000453551 ABCC9O60706 1549 aa36.03■■■■□ 3.36
PUF60-203ENST00000453551 CHIC1Q5VXU3 224 aa35.92■■■■□ 3.34
PUF60-203ENST00000453551 NACADO15069 1562 aa35.89■■■■□ 3.34
PUF60-203ENST00000453551 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
PUF60-203ENST00000453551 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
PUF60-203ENST00000453551 RB1CC1Q8TDY2 1594 aa35.26■■■■□ 3.24
PUF60-203ENST00000453551 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.19
PUF60-203ENST00000453551 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
PUF60-203ENST00000453551 BAZ1AQ9NRL2 1556 aaPredicted RBP34.78■■■■□ 3.16
PUF60-203ENST00000453551 WIZO95785 1651 aa34.72■■■■□ 3.15
PUF60-203ENST00000453551 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
PUF60-203ENST00000453551 LOC105371045A0A1W2PR82 267 aa34.53■■■■□ 3.12
PUF60-203ENST00000453551 TRIM41Q8WV44 630 aa34.51■■■■□ 3.11
PUF60-203ENST00000453551 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
PUF60-203ENST00000453551 EIF4G1Q04637 1599 aaKnown RBP34.43■■■■□ 3.1
PUF60-203ENST00000453551 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
PUF60-203ENST00000453551 HRCP23327 699 aa34.32■■■■□ 3.08
PUF60-203ENST00000453551 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
PUF60-203ENST00000453551 PCGF6Q9BYE7 350 aa34.22■■■■□ 3.07
PUF60-203ENST00000453551 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
PUF60-203ENST00000453551 CCDC88BA6NC98 1476 aa34.08■■■■□ 3.05
PUF60-203ENST00000453551 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
PUF60-203ENST00000453551 TRIM26Q12899 539 aaPredicted RBP33.97■■■■□ 3.03
PUF60-203ENST00000453551 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
PUF60-203ENST00000453551 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 33e-7■■■□□ 16.4
PUF60-203ENST00000453551 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
PUF60-203ENST00000453551 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
PUF60-203ENST00000453551 EEA1Q15075 1411 aa33.59■■■□□ 2.97
PUF60-203ENST00000453551 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
PUF60-203ENST00000453551 WRNQ14191 1432 aaPredicted RBP eCLIP33.38■■■□□ 2.93
PUF60-203ENST00000453551 SOGA1O94964 1423 aa33.35■■■□□ 2.93
PUF60-203ENST00000453551 TNIKQ9UKE5 1360 aa33.29■■■□□ 2.92
PUF60-203ENST00000453551 ZEB1P37275 1124 aaPredicted RBP33.28■■■□□ 2.92
PUF60-203ENST00000453551 EHMT2Q96KQ7 1210 aa33.28■■■□□ 2.92
PUF60-203ENST00000453551 PPARGC1BQ86YN6 1023 aaKnown RBP33.24■■■□□ 2.91
PUF60-203ENST00000453551 CSRNP3Q8WYN3 585 aa33.21■■■□□ 2.91
PUF60-203ENST00000453551 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
PUF60-203ENST00000453551 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
PUF60-203ENST00000453551 CEP162Q5TB80 1403 aa33.17■■■□□ 2.9
PUF60-203ENST00000453551 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
PUF60-203ENST00000453551 GOLGA3Q08378 1498 aa33.15■■■□□ 2.9
PUF60-203ENST00000453551 NCAPD3P42695 1498 aa33.14■■■□□ 2.9
PUF60-203ENST00000453551 KIF21BO75037 1637 aa33.09■■■□□ 2.89
PUF60-203ENST00000453551 CEP164Q9UPV0 1460 aa33.02■■■□□ 2.88
PUF60-203ENST00000453551 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PUF60-203ENST00000453551 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
PUF60-203ENST00000453551 UBTFP17480 764 aaKnown RBP32.83■■■□□ 2.85
PUF60-203ENST00000453551 CFTRP13569 1480 aa32.73■■■□□ 2.83
PUF60-203ENST00000453551 ERICH3Q5RHP9 1530 aa32.64■■■□□ 2.82
PUF60-203ENST00000453551 CLIP1P30622 1438 aa32.63■■■□□ 2.81
PUF60-203ENST00000453551 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
PUF60-203ENST00000453551 RAPGEF2Q9Y4G8 1499 aa32.62■■■□□ 2.81
PUF60-203ENST00000453551 CUX1P39880 1505 aa32.61■■■□□ 2.81
PUF60-203ENST00000453551 PRXQ9BXM0 1461 aa32.56■■■□□ 2.8
PUF60-203ENST00000453551 VPS8Q8N3P4 1428 aa32.55■■■□□ 2.8
PUF60-203ENST00000453551 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
PUF60-203ENST00000453551 CCER1Q8TC90 406 aaPredicted RBP32.37■■■□□ 2.77
PUF60-203ENST00000453551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.36■■■□□ 2.77
PUF60-203ENST00000453551 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
PUF60-203ENST00000453551 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
PUF60-203ENST00000453551 TTBK1Q5TCY1 1321 aaPredicted RBP32.22■■■□□ 2.75
PUF60-203ENST00000453551 ARAP1Q96P48 1450 aa32.21■■■□□ 2.75
PUF60-203ENST00000453551 APLP2Q06481 763 aa32.14■■■□□ 2.74
PUF60-203ENST00000453551 CUX2O14529 1486 aa32.06■■■□□ 2.72
PUF60-203ENST00000453551 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
PUF60-203ENST00000453551 IGF1RP08069 1367 aa32.02■■■□□ 2.72
PUF60-203ENST00000453551 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
PUF60-203ENST00000453551 ARHGAP35Q9NRY4 1499 aa31.96■■■□□ 2.71
PUF60-203ENST00000453551 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.7
PUF60-203ENST00000453551 CARMIL1Q5VZK9 1371 aa31.87■■■□□ 2.69
PUF60-203ENST00000453551 RANGAP1P46060 587 aaPredicted RBP31.86■■■□□ 2.69
PUF60-203ENST00000453551 MAP3K1Q13233 1512 aa31.83■■■□□ 2.69
PUF60-203ENST00000453551 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
PUF60-203ENST00000453551 RRBP1Q9P2E9 1410 aaKnown RBP31.81■■■□□ 2.68
PUF60-203ENST00000453551 HNRNPUL2Q1KMD3 747 aaKnown RBP31.81■■■□□ 2.68
PUF60-203ENST00000453551 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
PUF60-203ENST00000453551 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
PUF60-203ENST00000453551 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
PUF60-203ENST00000453551 KANK4Q5T7N3 995 aaPredicted RBP31.71■■■□□ 2.67
PUF60-203ENST00000453551 CUL7Q14999 1698 aa31.68■■■□□ 2.66
PUF60-203ENST00000453551 CLSPNQ9HAW4 1339 aa31.68■■■□□ 2.66
PUF60-203ENST00000453551 NESP48681 1621 aa31.65■■■□□ 2.66
PUF60-203ENST00000453551 TIAM1Q13009 1591 aa31.64■■■□□ 2.66
PUF60-203ENST00000453551 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
PUF60-203ENST00000453551 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
PUF60-203ENST00000453551 DIEXFQ68CQ4 756 aaKnown RBP31.61■■■□□ 2.65
PUF60-203ENST00000453551 ZNF316A6NFI3 1004 aaPredicted RBP31.59■■■□□ 2.65
PUF60-203ENST00000453551 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
PUF60-203ENST00000453551 EFCAB5A4FU69 1503 aa31.58■■■□□ 2.65
PUF60-203ENST00000453551 CCNB3Q8WWL7 1395 aa31.56■■■□□ 2.64
PUF60-203ENST00000453551 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
PUF60-203ENST00000453551 CFAP43Q8NDM7 1665 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms